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Gene : CLE9 A. thaliana

DB identifier  ? AT1G26600 Secondary Identifier  ? locus:2197905
Name  ? CLAVATA3/ESR-RELATED 9 Brief Description  CLAVATA3/ESR-RELATED 9
TAIR Computational Description  CLAVATA3/ESR-RELATED 9;(source:Araport11)
TAIR Curator Summary  Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo.
TAIR Short Description  CLAVATA3/ESR-RELATED 9
TAIR Aliases  CLE9

2 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1088  
Location: Chr1:9191503-9192590

Gene models - CLE9 AT1G26600

? Gene models

Transcripts: 2  Exons: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CLE9_ARATH function Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
A0A1P8AX22_ARATH CLE9_ARATH similarity Belongs to the CLV3/ESR signal peptide family.
CLE9_ARATH tissue specificity Mostly expressed in leaves, flowers, stems and apex, and, to a lower extent, in seedlings, roots, siliques and pollen.

2 Proteins

Function

Gene Ontology

cellular component
apoplast  ? ECO  
molecular function
No terms in this category.
biological process
regulation of cell differentiation  ? ECO  
maintenance of root meristem identity  ? ECO  
cell-cell signaling involved in cell fate commitment  ? ECO  
phloem development  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets