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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G25420:CDS:1 | 50 | Chr1: 8916141-8916190 | Arabidopsis thaliana |
AT1G25420:CDS:2 | 133 | Chr1: 8916361-8916493 | Arabidopsis thaliana |
AT1G25420:CDS:4 | 104 | Chr1: 8916571-8916674 | Arabidopsis thaliana |
AT1G25420:CDS:6 | 172 | Chr1: 8916765-8916936 | Arabidopsis thaliana |
AT1G25420:CDS:7 | 141 | Chr1: 8917055-8917195 | Arabidopsis thaliana |
AT1G25420:CDS:8 | 372 | Chr1: 8917609-8917980 | Arabidopsis thaliana |
AT1G25420:CDS:3 | 102 | Chr1: 8916392-8916493 | Arabidopsis thaliana |
AT1G25420:CDS:4.1 | 104 | Chr1: 8916571-8916674 | Arabidopsis thaliana |
AT1G25420:CDS:6.1 | 172 | Chr1: 8916765-8916936 | Arabidopsis thaliana |
AT1G25420:CDS:7.1 | 141 | Chr1: 8917055-8917195 | Arabidopsis thaliana |
AT1G25420:CDS:8.1 | 372 | Chr1: 8917609-8917980 | Arabidopsis thaliana |
AT1G25420:CDS:5 | 83 | Chr1: 8916592-8916674 | Arabidopsis thaliana |
AT1G25420:CDS:6.2 | 172 | Chr1: 8916765-8916936 | Arabidopsis thaliana |
AT1G25420:CDS:7.2 | 141 | Chr1: 8917055-8917195 | Arabidopsis thaliana |
AT1G25420:CDS:8.2 | 372 | Chr1: 8917609-8917980 | Arabidopsis thaliana |
AT1G25420:CDS:5.1 | 83 | Chr1: 8916592-8916674 | Arabidopsis thaliana |
AT1G25420:CDS:6.3 | 172 | Chr1: 8916765-8916936 | Arabidopsis thaliana |
AT1G25420:CDS:7.3 | 141 | Chr1: 8917055-8917195 | Arabidopsis thaliana |
AT1G25420:CDS:8.3 | 372 | Chr1: 8917609-8917980 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G25420:exon:1 | 276 | Chr1: 8915915-8916190 | Arabidopsis thaliana |
AT1G25420:exon:5 | 133 | Chr1: 8916361-8916493 | Arabidopsis thaliana |
AT1G25420:exon:2 | 579 | Chr1: 8915915-8916493 | Arabidopsis thaliana |
AT1G25420:exon:7 | 104 | Chr1: 8916571-8916674 | Arabidopsis thaliana |
AT1G25420:exon:12 | 659 | Chr1: 8917609-8918267 | Arabidopsis thaliana |
AT1G25420:exon:3 | 196 | Chr1: 8915995-8916190 | Arabidopsis thaliana |
AT1G25420:exon:6 | 314 | Chr1: 8916361-8916674 | Arabidopsis thaliana |
AT1G25420:exon:10 | 624 | Chr1: 8917609-8918232 | Arabidopsis thaliana |
AT1G25420:exon:4 | 647 | Chr1: 8916028-8916674 | Arabidopsis thaliana |
AT1G25420:exon:8 | 172 | Chr1: 8916765-8916936 | Arabidopsis thaliana |
AT1G25420:exon:9 | 141 | Chr1: 8917055-8917195 | Arabidopsis thaliana |
AT1G25420:exon:11 | 638 | Chr1: 8917609-8918246 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G25420:five_prime_UTR:1 | 226 | Chr1: 8915915-8916140 | Arabidopsis thaliana |
AT1G25420:five_prime_UTR:2 | 477 | Chr1: 8915915-8916391 | Arabidopsis thaliana |
AT1G25420:five_prime_UTR:3 | 196 | Chr1: 8915995-8916190 | Arabidopsis thaliana |
AT1G25420:five_prime_UTR:5 | 231 | Chr1: 8916361-8916591 | Arabidopsis thaliana |
AT1G25420:five_prime_UTR:4 | 564 | Chr1: 8916028-8916591 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G25420.1 | 1485 | Chr1: 8915915-8918267 |
AT1G25420.4 | 1655 | Chr1: 8915915-8918267 |
AT1G25420.3 | 1447 | Chr1: 8915995-8918232 |
AT1G25420.2 | 1598 | Chr1: 8916028-8918246 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G25420:three_prime_UTR:3 | 287 | Chr1: 8917981-8918267 | Arabidopsis thaliana |
AT1G25420:three_prime_UTR:1 | 252 | Chr1: 8917981-8918232 | Arabidopsis thaliana |
AT1G25420:three_prime_UTR:2 | 266 | Chr1: 8917981-8918246 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
protein transport | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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