External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G24320:CDS:22 | 145 | Chr1: 8626437-8626581 | Arabidopsis thaliana |
AT1G24320:CDS:21 | 174 | Chr1: 8626659-8626832 | Arabidopsis thaliana |
AT1G24320:CDS:20 | 92 | Chr1: 8626911-8627002 | Arabidopsis thaliana |
AT1G24320:CDS:19 | 150 | Chr1: 8627121-8627270 | Arabidopsis thaliana |
AT1G24320:CDS:18 | 57 | Chr1: 8627376-8627432 | Arabidopsis thaliana |
AT1G24320:CDS:17 | 54 | Chr1: 8627512-8627565 | Arabidopsis thaliana |
AT1G24320:CDS:16 | 150 | Chr1: 8627644-8627793 | Arabidopsis thaliana |
AT1G24320:CDS:15 | 68 | Chr1: 8627939-8628006 | Arabidopsis thaliana |
AT1G24320:CDS:14 | 126 | Chr1: 8628163-8628288 | Arabidopsis thaliana |
AT1G24320:CDS:13 | 74 | Chr1: 8628380-8628453 | Arabidopsis thaliana |
AT1G24320:CDS:12 | 108 | Chr1: 8628546-8628653 | Arabidopsis thaliana |
AT1G24320:CDS:11 | 122 | Chr1: 8628737-8628858 | Arabidopsis thaliana |
AT1G24320:CDS:10 | 108 | Chr1: 8628933-8629040 | Arabidopsis thaliana |
AT1G24320:CDS:9 | 83 | Chr1: 8629135-8629217 | Arabidopsis thaliana |
AT1G24320:CDS:8 | 97 | Chr1: 8629424-8629520 | Arabidopsis thaliana |
AT1G24320:CDS:7 | 69 | Chr1: 8629641-8629709 | Arabidopsis thaliana |
AT1G24320:CDS:6 | 87 | Chr1: 8629822-8629908 | Arabidopsis thaliana |
AT1G24320:CDS:4 | 421 | Chr1: 8629993-8630413 | Arabidopsis thaliana |
AT1G24320:CDS:2 | 74 | Chr1: 8630672-8630745 | Arabidopsis thaliana |
AT1G24320:CDS:1 | 111 | Chr1: 8630825-8630935 | Arabidopsis thaliana |
AT1G24320:CDS:22.1 | 145 | Chr1: 8626437-8626581 | Arabidopsis thaliana |
AT1G24320:CDS:21.1 | 174 | Chr1: 8626659-8626832 | Arabidopsis thaliana |
AT1G24320:CDS:20.1 | 92 | Chr1: 8626911-8627002 | Arabidopsis thaliana |
AT1G24320:CDS:19.1 | 150 | Chr1: 8627121-8627270 | Arabidopsis thaliana |
AT1G24320:CDS:18.1 | 57 | Chr1: 8627376-8627432 | Arabidopsis thaliana |
AT1G24320:CDS:17.1 | 54 | Chr1: 8627512-8627565 | Arabidopsis thaliana |
AT1G24320:CDS:16.1 | 150 | Chr1: 8627644-8627793 | Arabidopsis thaliana |
AT1G24320:CDS:15.1 | 68 | Chr1: 8627939-8628006 | Arabidopsis thaliana |
AT1G24320:CDS:14.1 | 126 | Chr1: 8628163-8628288 | Arabidopsis thaliana |
AT1G24320:CDS:13.1 | 74 | Chr1: 8628380-8628453 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G24310:exon:9 | 340 | Chr1: 8626066-8626405 | Arabidopsis thaliana |
AT1G24320:exon:24 | 267 | Chr1: 8626315-8626581 | Arabidopsis thaliana |
AT1G24320:exon:5 | 421 | Chr1: 8629993-8630413 | Arabidopsis thaliana |
AT1G24320:exon:2 | 201 | Chr1: 8630825-8631025 | Arabidopsis thaliana |
AT1G24320:exon:23 | 145 | Chr1: 8626437-8626581 | Arabidopsis thaliana |
AT1G24320:exon:22 | 174 | Chr1: 8626659-8626832 | Arabidopsis thaliana |
AT1G24320:exon:21 | 92 | Chr1: 8626911-8627002 | Arabidopsis thaliana |
AT1G24320:exon:20 | 150 | Chr1: 8627121-8627270 | Arabidopsis thaliana |
AT1G24320:exon:19 | 57 | Chr1: 8627376-8627432 | Arabidopsis thaliana |
AT1G24320:exon:18 | 54 | Chr1: 8627512-8627565 | Arabidopsis thaliana |
AT1G24320:exon:17 | 150 | Chr1: 8627644-8627793 | Arabidopsis thaliana |
AT1G24320:exon:16 | 68 | Chr1: 8627939-8628006 | Arabidopsis thaliana |
AT1G24320:exon:15 | 126 | Chr1: 8628163-8628288 | Arabidopsis thaliana |
AT1G24320:exon:14 | 74 | Chr1: 8628380-8628453 | Arabidopsis thaliana |
AT1G24320:exon:13 | 108 | Chr1: 8628546-8628653 | Arabidopsis thaliana |
AT1G24320:exon:12 | 122 | Chr1: 8628737-8628858 | Arabidopsis thaliana |
AT1G24320:exon:11 | 108 | Chr1: 8628933-8629040 | Arabidopsis thaliana |
AT1G24320:exon:10 | 83 | Chr1: 8629135-8629217 | Arabidopsis thaliana |
AT1G24320:exon:9 | 97 | Chr1: 8629424-8629520 | Arabidopsis thaliana |
AT1G24320:exon:8 | 69 | Chr1: 8629641-8629709 | Arabidopsis thaliana |
AT1G24320:exon:7 | 87 | Chr1: 8629822-8629908 | Arabidopsis thaliana |
AT1G24320:exon:6 | 53 | Chr1: 8629993-8630045 | Arabidopsis thaliana |
AT1G24320:exon:4 | 275 | Chr1: 8630139-8630413 | Arabidopsis thaliana |
AT1G24320:exon:3 | 74 | Chr1: 8630672-8630745 | Arabidopsis thaliana |
AT1G24320:exon:1 | 203 | Chr1: 8630825-8631027 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G24320:five_prime_UTR:2 | 90 | Chr1: 8630936-8631025 | Arabidopsis thaliana |
AT1G24320:five_prime_UTR:1 | 92 | Chr1: 8630936-8631027 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G24310 | locus:2032417 | AT1G24310 | 2392 | Chr1: 8624014-8626405 | A. thaliana | nuclear pore complex protein;(source:Araport11) | NULL | NULL | NUP54 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G24310.1 | 1538 | Chr1: 8624014-8626405 |
AT1G24320.1 | 2582 | Chr1: 8626315-8631025 |
AT1G24320.2 | 2369 | Chr1: 8626437-8631027 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G24310:three_prime_UTR:1 | 226 | Chr1: 8626180-8626405 | Arabidopsis thaliana |
AT1G24320:three_prime_UTR:1 | 122 | Chr1: 8626315-8626436 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8ARK2_ARATH | function | Cleaves the distal alpha 1,2-linked glucose residue from the Glc(3)Man(9)GlcNAc(2) oligosaccharide precursor. |
GCS2_ARATH | pathway | Glycan metabolism; N-glycan degradation. |
GCS2_ARATH A0A1P8ARK2_ARATH | similarity | Belongs to the glycosyl hydrolase 63 family. |
Function
Gene Ontology
cellular component | |
---|---|
endoplasmic reticulum membrane | ECO |
molecular function | |
Glc3Man9GlcNAc2 oligosaccharide glucosidase activity | ECO |
biological process | |
oligosaccharide metabolic process | ECO |
protein N-linked glycosylation | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...