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Genomics
Transcript | Exons | Introns | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
AT1G24040.1
AT1G24040.1
1398 |
|
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AT1G24040.2
AT1G24040.2
1490 |
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AT1G24040.3
AT1G24040.3
1020 |
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Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
Exons
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G24040:five_prime_UTR:1 | 84 | Chr1: 8506754-8506837 | Arabidopsis thaliana |
AT1G24040:five_prime_UTR:2 | 60 | Chr1: 8506754-8506813 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G24030 | locus:2199857 | AT1G24030 | 2244 | Chr1: 8503217-8505460 | A. thaliana | Protein kinase superfamily protein;(source:Araport11) | NULL | Protein kinase superfamily protein | PBL28 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G24030.1 | 1570 | Chr1: 8503217-8505460 |
AT1G24030.5 | 928 | Chr1: 8503234-8504577 |
AT1G24030.4 | 1024 | Chr1: 8503234-8504871 |
AT1G24030.3 | 1387 | Chr1: 8503234-8505195 |
AT1G24030.2 | 1511 | Chr1: 8503234-8505460 |
AT1G24030.6 | 813 | Chr1: 8503926-8505195 |
AT1G24040.1 | 1398 | Chr1: 8503777-8506837 |
AT1G24040.2 | 1490 | Chr1: 8503789-8506837 |
AT1G24040.3 | 1020 | Chr1: 8505794-8506813 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G24030:three_prime_UTR:1 | 265 | Chr1: 8505196-8505460 | Arabidopsis thaliana |
AT1G24040:three_prime_UTR:5 | 311 | Chr1: 8503777-8504087 | Arabidopsis thaliana |
AT1G24040:three_prime_UTR:3 | 79 | Chr1: 8505613-8505691 | Arabidopsis thaliana |
AT1G24040:three_prime_UTR:1 | 6 | Chr1: 8505788-8505793 | Arabidopsis thaliana |
AT1G24040:three_prime_UTR:4 | 299 | Chr1: 8503789-8504087 | Arabidopsis thaliana |
AT1G24040:three_prime_UTR:2 | 181 | Chr1: 8505613-8505793 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
GNAT5_ARATH | function | Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA), with a large spectrum of modified N-termini, including methionine, alanine, serine and to a lower extent threonine and valine as substrates, and epsilon-lysine acetylation (KA). |
GNAT5_ARATH | similarity | Belongs to the acetyltransferase family. GNAT subfamily. |
GNAT5_ARATH | tissue specificity | Expressed in green tissues. |
Function
Gene Ontology
cellular component | |
---|---|
chloroplast | ECO |
molecular function | |
N-acetyltransferase activity | ECO |
biological process | |
peptidyl-lysine acetylation | ECO |
N-terminal protein amino acid acetylation | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...