External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G23880:CDS:4 | 160 | Chr1: 8436689-8436848 | Arabidopsis thaliana |
AT1G23880:CDS:5 | 171 | Chr1: 8437238-8437408 | Arabidopsis thaliana |
AT1G23880:CDS:6 | 213 | Chr1: 8437498-8437710 | Arabidopsis thaliana |
AT1G23880:CDS:7 | 89 | Chr1: 8437822-8437910 | Arabidopsis thaliana |
AT1G23880:CDS:8 | 633 | Chr1: 8438004-8438636 | Arabidopsis thaliana |
AT1G23880:CDS:1 | 268 | Chr1: 8436125-8436392 | Arabidopsis thaliana |
AT1G23880:CDS:2 | 87 | Chr1: 8436491-8436577 | Arabidopsis thaliana |
AT1G23880:CDS:3 | 177 | Chr1: 8436672-8436848 | Arabidopsis thaliana |
AT1G23880:CDS:5.1 | 171 | Chr1: 8437238-8437408 | Arabidopsis thaliana |
AT1G23880:CDS:6.1 | 213 | Chr1: 8437498-8437710 | Arabidopsis thaliana |
AT1G23880:CDS:7.1 | 89 | Chr1: 8437822-8437910 | Arabidopsis thaliana |
AT1G23880:CDS:8.1 | 633 | Chr1: 8438004-8438636 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G23880:exon:3 | 358 | Chr1: 8436491-8436848 | Arabidopsis thaliana |
AT1G23880:exon:8 | 805 | Chr1: 8438004-8438808 | Arabidopsis thaliana |
AT1G23880:exon:1 | 736 | Chr1: 8435657-8436392 | Arabidopsis thaliana |
AT1G23880:exon:2 | 87 | Chr1: 8436491-8436577 | Arabidopsis thaliana |
AT1G23880:exon:4 | 177 | Chr1: 8436672-8436848 | Arabidopsis thaliana |
AT1G23880:exon:5 | 171 | Chr1: 8437238-8437408 | Arabidopsis thaliana |
AT1G23880:exon:6 | 213 | Chr1: 8437498-8437710 | Arabidopsis thaliana |
AT1G23880:exon:7 | 89 | Chr1: 8437822-8437910 | Arabidopsis thaliana |
AT1G23880:exon:9 | 808 | Chr1: 8438004-8438811 | Arabidopsis thaliana |
AT1G23890:exon:7 | 651 | Chr1: 8438766-8439416 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G23880:five_prime_UTR:2 | 736 | Chr1: 8435657-8436392 | Arabidopsis thaliana |
AT1G23880:five_prime_UTR:3 | 198 | Chr1: 8436491-8436688 | Arabidopsis thaliana |
AT1G23880:five_prime_UTR:1 | 468 | Chr1: 8435657-8436124 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G23890 | locus:2199872 | AT1G23890 | 2101 | Chr1: 8438766-8440866 | A. thaliana | NHL domain-containing protein;(source:Araport11) | NULL | NHL domain-containing protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G23880.2 | 2372 | Chr1: 8435657-8438808 |
AT1G23880.1 | 2281 | Chr1: 8435657-8438811 |
AT1G23890.1 | 1404 | Chr1: 8438766-8440866 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G23880:three_prime_UTR:1 | 172 | Chr1: 8438637-8438808 | Arabidopsis thaliana |
AT1G23880:three_prime_UTR:2 | 175 | Chr1: 8438637-8438811 | Arabidopsis thaliana |
AT1G23890:three_prime_UTR:1 | 555 | Chr1: 8438766-8439320 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...