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Gene : AT1G23200 A. thaliana

DB identifier  ? AT1G23200 Secondary Identifier  ? locus:2201230
Brief Description  Plant invertase/pectin methylesterase inhibitor superfamily
TAIR Computational Description  Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11)
TAIR Curator Summary  ProPME pectin methyl esterase involved in embryo development, stomatal function, mucilage release.
TAIR Short Description  Plant invertase/pectin methylesterase inhibitor superfamily
TAIR Aliases  HMS, PME6

1 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2529  
Location: Chr1:8227133-8229661

Gene models - AT1G23200 AT1G23200

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features Displayer

3 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PME6_ARATH developmental stage Low expression in vegetative and flower stages. No expression in young siliques but highly expressed in older siliques.
PME6_ARATH function Acts in the modification of cell walls via demethylesterification of cell wall pectin.
PME6_ARATH pathway Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.
PME6_ARATH similarity In the C-terminal section; belongs to the pectinesterase family.
PME6_ARATH similarity In the N-terminal section; belongs to the PMEI family.
PME6_ARATH tissue specificity Expressed in rosette leaves, flower and siliques.

1 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
molecular function
enzyme inhibitor activity  ? ECO  
pectinesterase activity  ? ECO  
biological process
pectin catabolic process  ? ECO  
cell wall modification  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets