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Gene : AT1G22870 A. thaliana

DB identifier  ? AT1G22870 Secondary Identifier  ? locus:2017784
Brief Description  kinase family with ARM repeat domain-containing protein
TAIR Computational Description  kinase family with ARM repeat domain-containing protein;(source:Araport11)
TAIR Curator Summary  One of two paralogs in Arabidopsis.Loss of both SCYL2B and SCYL2A results in severe growth defects.
TAIR Short Description  Protein kinase family protein with ARM repeat domain
TAIR Aliases  SCYL2A

1 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5239  
Location: Chr1:8089267-8094505

Gene models - AT1G22870 AT1G22870

? Gene models

Transcripts: 4  Exons: 56  Introns: 52 

Overlapping Features

? Genome features that overlap coordinates of this Gene

25 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SCY2A_ARATH developmental stage Mainly expressed in leaf mesophyll cells, and, at low levels, in root vascular tissues.
SCY2A_ARATH function Probably inactive kinase (PubMed:28751315). Component of the AP2-containing clathrin coat that regulates clathrin-dependent trafficking at plasma membrane, TGN and endosomal system (PubMed:28751315). Together with SCYL2B, required for cell growth, plant growth and development (PubMed:28751315).
SCY2A_ARATH similarity Belongs to the protein kinase superfamily.
SCY2A_ARATH subcellular location Colocalizes with the clathrin heavy chain 1 (CHC1).
SCY2A_ARATH tissue specificity Expressed in roots, seedlings, leaves, stems, flowers, and, at low levels, in siliques.

4 Proteins

Function

Gene Ontology

cellular component
late endosome membrane  ? ECO  
trans-Golgi network membrane  ? ECO  
Golgi membrane  ? ECO  
molecular function
ATP binding  ? ECO  
protein kinase activity  ? ECO  
clathrin heavy chain binding  ? ECO  
biological process
protein phosphorylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets