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Gene : CYTC-1 A. thaliana

DB identifier  ? AT1G22840 Secondary Identifier  ? locus:2017729
Name  ? CYTOCHROME C-1 Brief Description  CYTOCHROME C-1
TAIR Computational Description  CYTOCHROME C-1;(source:Araport11)
TAIR Curator Summary  Encodes cytochrome c. Contains two site II (TGGGCC/T) elements, which interact with a TCP-domain transcription factor, and a downstream internal telomeric repeat, and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers. Double mutants with CYTC-2 accumulate starch during the day, have delayed growth and development and reduced GA and DELLA proteins linking cellular metabolism and GA homeostasis.
TAIR Short Description  CYTOCHROME C-1
TAIR Aliases  ATCYTC-A, CYTC-1

3 Gene Rifs

1 Organism

23 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1288  
Location: Chr1:8079287-8080574

Gene models - CYTC-1 AT1G22840

? Gene models

Transcripts: 2  Exons: 6  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
B3H4Y9_ARATH function Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
CYC1_ARATH function Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity).
B3H4Y9_ARATH CYC1_ARATH similarity Belongs to the cytochrome c family.
CYC1_ARATH subcellular location Loosely associated with the inner membrane.

2 Proteins

Function

Gene Ontology

cellular component
plant-type vacuole  ? ECO  
cytosol  ? ECO  
mitochondrial intermembrane space  ? ECO  
nucleus  ? ECO  
mitochondrion  ? ECO  
molecular function
copper ion binding  ? ECO  
electron transfer activity  ? ECO  
heme binding  ? ECO  
biological process
gibberellic acid homeostasis  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets