External Links
- Aracyc
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- Plant Proteome Database
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- TAIR
- EnsemblPlants
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 18, Exons: 13, Five Prime UTRs: 6, Genes: 2, mRNAs: 5, Three Prime UTRs: 3
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G22180:CDS:6 | 351 | Chr1: 7828434-7828784 | Arabidopsis thaliana |
AT1G22180:CDS:5 | 243 | Chr1: 7828867-7829109 | Arabidopsis thaliana |
AT1G22180:CDS:4 | 99 | Chr1: 7829191-7829289 | Arabidopsis thaliana |
AT1G22180:CDS:3 | 57 | Chr1: 7829380-7829436 | Arabidopsis thaliana |
AT1G22180:CDS:6.1 | 351 | Chr1: 7828434-7828784 | Arabidopsis thaliana |
AT1G22180:CDS:5.1 | 243 | Chr1: 7828867-7829109 | Arabidopsis thaliana |
AT1G22180:CDS:4.1 | 99 | Chr1: 7829191-7829289 | Arabidopsis thaliana |
AT1G22180:CDS:3.1 | 57 | Chr1: 7829380-7829436 | Arabidopsis thaliana |
AT1G22180:CDS:6.2 | 351 | Chr1: 7828434-7828784 | Arabidopsis thaliana |
AT1G22180:CDS:5.2 | 243 | Chr1: 7828867-7829109 | Arabidopsis thaliana |
AT1G22180:CDS:4.2 | 99 | Chr1: 7829191-7829289 | Arabidopsis thaliana |
AT1G22180:CDS:2 | 177 | Chr1: 7829380-7829556 | Arabidopsis thaliana |
AT1G22180:CDS:1 | 75 | Chr1: 7829671-7829745 | Arabidopsis thaliana |
AT1G22180:CDS:6.3 | 351 | Chr1: 7828434-7828784 | Arabidopsis thaliana |
AT1G22180:CDS:5.3 | 243 | Chr1: 7828867-7829109 | Arabidopsis thaliana |
AT1G22180:CDS:4.3 | 99 | Chr1: 7829191-7829289 | Arabidopsis thaliana |
AT1G22180:CDS:2.1 | 177 | Chr1: 7829380-7829556 | Arabidopsis thaliana |
AT1G22180:CDS:1.1 | 75 | Chr1: 7829671-7829745 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G22170:exon:9 | 328 | Chr1: 7827999-7828326 | Arabidopsis thaliana |
AT1G22180:exon:11 | 459 | Chr1: 7828326-7828784 | Arabidopsis thaliana |
AT1G22180:exon:5 | 1001 | Chr1: 7829380-7830380 | Arabidopsis thaliana |
AT1G22180:exon:2 | 125 | Chr1: 7830151-7830275 | Arabidopsis thaliana |
AT1G22180:exon:10 | 457 | Chr1: 7828328-7828784 | Arabidopsis thaliana |
AT1G22180:exon:4 | 81 | Chr1: 7829671-7829751 | Arabidopsis thaliana |
AT1G22180:exon:1 | 274 | Chr1: 7830151-7830424 | Arabidopsis thaliana |
AT1G22180:exon:9 | 351 | Chr1: 7828434-7828784 | Arabidopsis thaliana |
AT1G22180:exon:8 | 243 | Chr1: 7828867-7829109 | Arabidopsis thaliana |
AT1G22180:exon:7 | 99 | Chr1: 7829191-7829289 | Arabidopsis thaliana |
AT1G22180:exon:6 | 177 | Chr1: 7829380-7829556 | Arabidopsis thaliana |
AT1G22180:exon:3 | 754 | Chr1: 7829671-7830424 | Arabidopsis thaliana |
AT1G05727:exon:1 | 424 | Chr1: 7829731-7830154 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G22180:five_prime_UTR:5 | 944 | Chr1: 7829437-7830380 | Arabidopsis thaliana |
AT1G22180:five_prime_UTR:6 | 120 | Chr1: 7829437-7829556 | Arabidopsis thaliana |
AT1G22180:five_prime_UTR:2 | 125 | Chr1: 7830151-7830275 | Arabidopsis thaliana |
AT1G22180:five_prime_UTR:4 | 6 | Chr1: 7829746-7829751 | Arabidopsis thaliana |
AT1G22180:five_prime_UTR:1 | 274 | Chr1: 7830151-7830424 | Arabidopsis thaliana |
AT1G22180:five_prime_UTR:3 | 679 | Chr1: 7829746-7830424 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G22170 | locus:2015021 | AT1G22170 | 2059 | Chr1: 7826268-7828326 | A. thaliana | Phosphoglycerate mutase family protein;(source:Araport11) | NULL | Phosphoglycerate mutase family protein | ||
AT1G05727 | AT1G05727 | 424 | Chr1: 7829731-7830154 | A. thaliana | Natural antisense transcript overlaps with AT1G22180;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G22170.1 | 1413 | Chr1: 7826268-7828326 |
AT1G22180.3 | 1802 | Chr1: 7828326-7830380 |
AT1G22180.1 | 1101 | Chr1: 7828328-7830275 |
AT1G22180.2 | 1331 | Chr1: 7828328-7830424 |
AT1G22180.4 | 1624 | Chr1: 7828434-7830424 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G22170:three_prime_UTR:1 | 271 | Chr1: 7828056-7828326 | Arabidopsis thaliana |
AT1G22180:three_prime_UTR:2 | 108 | Chr1: 7828326-7828433 | Arabidopsis thaliana |
AT1G22180:three_prime_UTR:1 | 106 | Chr1: 7828328-7828433 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...