External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G22060:CDS:9 | 277 | Chr1: 7773373-7773649 | Arabidopsis thaliana |
AT1G22060:CDS:8 | 143 | Chr1: 7773743-7773885 | Arabidopsis thaliana |
AT1G22060:CDS:7 | 102 | Chr1: 7773967-7774068 | Arabidopsis thaliana |
AT1G22060:CDS:6 | 156 | Chr1: 7774241-7774396 | Arabidopsis thaliana |
AT1G22060:CDS:5 | 4755 | Chr1: 7774704-7779458 | Arabidopsis thaliana |
AT1G22060:CDS:4 | 165 | Chr1: 7779672-7779836 | Arabidopsis thaliana |
AT1G22060:CDS:3 | 123 | Chr1: 7779947-7780069 | Arabidopsis thaliana |
AT1G22060:CDS:2 | 201 | Chr1: 7780155-7780355 | Arabidopsis thaliana |
AT1G22060:CDS:1 | 78 | Chr1: 7780509-7780586 | Arabidopsis thaliana |
AT1G22060:CDS:9.1 | 277 | Chr1: 7773373-7773649 | Arabidopsis thaliana |
AT1G22060:CDS:8.1 | 143 | Chr1: 7773743-7773885 | Arabidopsis thaliana |
AT1G22060:CDS:7.1 | 102 | Chr1: 7773967-7774068 | Arabidopsis thaliana |
AT1G22060:CDS:6.1 | 156 | Chr1: 7774241-7774396 | Arabidopsis thaliana |
AT1G22060:CDS:5.1 | 4755 | Chr1: 7774704-7779458 | Arabidopsis thaliana |
AT1G22060:CDS:4.1 | 165 | Chr1: 7779672-7779836 | Arabidopsis thaliana |
AT1G22060:CDS:3.1 | 123 | Chr1: 7779947-7780069 | Arabidopsis thaliana |
AT1G22060:CDS:2.1 | 201 | Chr1: 7780155-7780355 | Arabidopsis thaliana |
AT1G22060:CDS:1.1 | 78 | Chr1: 7780509-7780586 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G22050:exon:3 | 367 | Chr1: 7772788-7773154 | Arabidopsis thaliana |
AT1G22060:exon:12 | 587 | Chr1: 7773063-7773649 | Arabidopsis thaliana |
AT1G22060:exon:1 | 317 | Chr1: 7781223-7781539 | Arabidopsis thaliana |
AT1G22060:exon:11 | 277 | Chr1: 7773373-7773649 | Arabidopsis thaliana |
AT1G22060:exon:10 | 143 | Chr1: 7773743-7773885 | Arabidopsis thaliana |
AT1G22060:exon:9 | 102 | Chr1: 7773967-7774068 | Arabidopsis thaliana |
AT1G22060:exon:8 | 156 | Chr1: 7774241-7774396 | Arabidopsis thaliana |
AT1G22060:exon:7 | 4755 | Chr1: 7774704-7779458 | Arabidopsis thaliana |
AT1G22060:exon:6 | 165 | Chr1: 7779672-7779836 | Arabidopsis thaliana |
AT1G22060:exon:5 | 123 | Chr1: 7779947-7780069 | Arabidopsis thaliana |
AT1G22060:exon:4 | 201 | Chr1: 7780155-7780355 | Arabidopsis thaliana |
AT1G22060:exon:3 | 105 | Chr1: 7780509-7780613 | Arabidopsis thaliana |
AT1G22060:exon:2 | 163 | Chr1: 7781017-7781179 | Arabidopsis thaliana |
AT1G05707:exon:1 | 268 | Chr1: 7781197-7781464 | Arabidopsis thaliana |
AT1G05707:exon:2 | 200 | Chr1: 7781513-7781712 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G22060:five_prime_UTR:1 | 317 | Chr1: 7781223-7781539 | Arabidopsis thaliana |
AT1G22060:five_prime_UTR:3 | 27 | Chr1: 7780587-7780613 | Arabidopsis thaliana |
AT1G22060:five_prime_UTR:2 | 163 | Chr1: 7781017-7781179 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G22050 | locus:2030616 | MUB6 | membrane-anchored ubiquitin-fold protein 6 precursor | 1496 | Chr1: 7771659-7773154 | A. thaliana | membrane-anchored ubiquitin-fold protein 6 precursor;(source:Araport11) | NULL | membrane-anchored ubiquitin-fold protein 6 precursor | MUB6 |
AT1G05707 | AT1G05707 | 516 | Chr1: 7781197-7781712 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G22050.1 | 909 | Chr1: 7771659-7773154 |
AT1G22060.1 | 6654 | Chr1: 7773063-7781539 |
AT1G22060.2 | 6190 | Chr1: 7773373-7781179 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G22050:three_prime_UTR:1 | 311 | Chr1: 7772844-7773154 | Arabidopsis thaliana |
AT1G22060:three_prime_UTR:1 | 310 | Chr1: 7773063-7773372 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
plant-type vacuole | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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