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Gene : SHM6 A. thaliana

DB identifier  ? AT1G22020 Secondary Identifier  ? locus:2030581
Name  ? serine hydroxymethyltransferase 6 Brief Description  serine hydroxymethyltransferase 6
TAIR Computational Description  serine hydroxymethyltransferase 6;(source:Araport11)
TAIR Curator Summary  Encodes a putative serine hydroxymethyltransferase; involved in protein ubiquination, histone binding, regulation of DNA methylation, chromatin organization.
TAIR Short Description  serine hydroxymethyltransferase 6
TAIR Aliases  SHM6

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3749  
Location: Chr1:7754281-7758029

Gene models - SHM6 AT1G22020

? Gene models

Transcripts: 2  Exons: 9  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
GLYC6_ARATH function Catalyzes the interconversion of serine and glycine.
GLYC6_ARATH pathway One-carbon metabolism; tetrahydrofolate interconversion.
GLYC6_ARATH similarity Belongs to the SHMT family.

1 Proteins

Function

Gene Ontology

cellular component
cytoplasm  ? ECO  
molecular function
glycine hydroxymethyltransferase activity  ? ECO  
pyridoxal phosphate binding  ? ECO  
biological process
tetrahydrofolate interconversion  ? ECO  
glycine biosynthetic process from serine  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets