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Gene : AT1G21580 A. thaliana

DB identifier  ? AT1G21580 Secondary Identifier  ? locus:2027077
Brief Description  Zinc finger C-x8-C-x5-C-x3-H type family protein
TAIR Computational Description  Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)
TAIR Curator Summary  Encodes a zinc-finger protein that co-localizes with the exosome-associated RNA helicase HEN2 and functions as a co-factor of nuclear RNA quality control by the nucleoplasmic exosome.
TAIR Short Description  Zinc finger C-x8-C-x5-C-x3-H type family protein
TAIR Aliases  SOP1

1 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 8775  
Location: Chr1:7557140-7565914 reverse strand

Gene models - AT1G21580 AT1G21580

? Gene models

Transcripts: 9  Exons: 69  Introns: 60 

Overlapping Features

? Genome features that overlap coordinates of this Gene

29 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

5 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
No terms in this category.
biological process
No terms in this category.

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets