External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G21580:CDS:16 | 390 | Chr1: 7557822-7558211 | Arabidopsis thaliana |
AT1G21580:CDS:14 | 104 | Chr1: 7558475-7558578 | Arabidopsis thaliana |
AT1G21580:CDS:10 | 43 | Chr1: 7558644-7558686 | Arabidopsis thaliana |
AT1G21580:CDS:8 | 271 | Chr1: 7558761-7559031 | Arabidopsis thaliana |
AT1G21580:CDS:7 | 91 | Chr1: 7559115-7559205 | Arabidopsis thaliana |
AT1G21580:CDS:6 | 75 | Chr1: 7559439-7559513 | Arabidopsis thaliana |
AT1G21580:CDS:5 | 97 | Chr1: 7559649-7559745 | Arabidopsis thaliana |
AT1G21580:CDS:4 | 151 | Chr1: 7559850-7560000 | Arabidopsis thaliana |
AT1G21580:CDS:3 | 196 | Chr1: 7560093-7560288 | Arabidopsis thaliana |
AT1G21580:CDS:1 | 5083 | Chr1: 7560573-7565655 | Arabidopsis thaliana |
AT1G21580:CDS:13 | 78 | Chr1: 7558501-7558578 | Arabidopsis thaliana |
AT1G21580:CDS:9 | 388 | Chr1: 7558644-7559031 | Arabidopsis thaliana |
AT1G21580:CDS:7.1 | 91 | Chr1: 7559115-7559205 | Arabidopsis thaliana |
AT1G21580:CDS:6.1 | 75 | Chr1: 7559439-7559513 | Arabidopsis thaliana |
AT1G21580:CDS:5.1 | 97 | Chr1: 7559649-7559745 | Arabidopsis thaliana |
AT1G21580:CDS:4.1 | 151 | Chr1: 7559850-7560000 | Arabidopsis thaliana |
AT1G21580:CDS:3.1 | 196 | Chr1: 7560093-7560288 | Arabidopsis thaliana |
AT1G21580:CDS:1.1 | 5083 | Chr1: 7560573-7565655 | Arabidopsis thaliana |
AT1G21580:CDS:15 | 134 | Chr1: 7558445-7558578 | Arabidopsis thaliana |
AT1G21580:CDS:10.1 | 43 | Chr1: 7558644-7558686 | Arabidopsis thaliana |
AT1G21580:CDS:8.1 | 271 | Chr1: 7558761-7559031 | Arabidopsis thaliana |
AT1G21580:CDS:7.2 | 91 | Chr1: 7559115-7559205 | Arabidopsis thaliana |
AT1G21580:CDS:6.2 | 75 | Chr1: 7559439-7559513 | Arabidopsis thaliana |
AT1G21580:CDS:5.2 | 97 | Chr1: 7559649-7559745 | Arabidopsis thaliana |
AT1G21580:CDS:4.2 | 151 | Chr1: 7559850-7560000 | Arabidopsis thaliana |
AT1G21580:CDS:3.2 | 196 | Chr1: 7560093-7560288 | Arabidopsis thaliana |
AT1G21580:CDS:1.2 | 5083 | Chr1: 7560573-7565655 | Arabidopsis thaliana |
AT1G21580:CDS:11 | 439 | Chr1: 7558593-7559031 | Arabidopsis thaliana |
AT1G21580:CDS:7.3 | 91 | Chr1: 7559115-7559205 | Arabidopsis thaliana |
AT1G21580:CDS:6.3 | 75 | Chr1: 7559439-7559513 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G21580:exon:20 | 1072 | Chr1: 7557140-7558211 | Arabidopsis thaliana |
AT1G21580:exon:19 | 1439 | Chr1: 7557140-7558578 | Arabidopsis thaliana |
AT1G21580:exon:12 | 43 | Chr1: 7558644-7558686 | Arabidopsis thaliana |
AT1G21580:exon:18 | 1892 | Chr1: 7557140-7559031 | Arabidopsis thaliana |
AT1G21580:exon:1 | 5342 | Chr1: 7560573-7565914 | Arabidopsis thaliana |
AT1G21580:exon:15 | 104 | Chr1: 7558475-7558578 | Arabidopsis thaliana |
AT1G21580:exon:11 | 388 | Chr1: 7558644-7559031 | Arabidopsis thaliana |
AT1G21580:exon:14 | 212 | Chr1: 7558475-7558686 | Arabidopsis thaliana |
AT1G21580:exon:17 | 1050 | Chr1: 7557162-7558211 | Arabidopsis thaliana |
AT1G21580:exon:13 | 557 | Chr1: 7558475-7559031 | Arabidopsis thaliana |
AT1G21580:exon:3 | 5231 | Chr1: 7560573-7565803 | Arabidopsis thaliana |
AT1G21580:exon:16 | 1454 | Chr1: 7557233-7558686 | Arabidopsis thaliana |
AT1G21580:exon:10 | 271 | Chr1: 7558761-7559031 | Arabidopsis thaliana |
AT1G21580:exon:9 | 91 | Chr1: 7559115-7559205 | Arabidopsis thaliana |
AT1G21580:exon:8 | 75 | Chr1: 7559439-7559513 | Arabidopsis thaliana |
AT1G21580:exon:7 | 97 | Chr1: 7559649-7559745 | Arabidopsis thaliana |
AT1G21580:exon:6 | 151 | Chr1: 7559850-7560000 | Arabidopsis thaliana |
AT1G21580:exon:5 | 196 | Chr1: 7560093-7560288 | Arabidopsis thaliana |
AT1G21580:exon:2 | 5323 | Chr1: 7560573-7565895 | Arabidopsis thaliana |
AT1G21580:exon:4 | 5091 | Chr1: 7560565-7565655 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G21580:five_prime_UTR:1 | 259 | Chr1: 7565656-7565914 | Arabidopsis thaliana |
AT1G21580:five_prime_UTR:3 | 148 | Chr1: 7565656-7565803 | Arabidopsis thaliana |
AT1G21580:five_prime_UTR:2 | 240 | Chr1: 7565656-7565895 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G21580.1 | 7442 | Chr1: 7557140-7565914 |
AT1G21580.3 | 7779 | Chr1: 7557140-7565914 |
AT1G21580.4 | 7705 | Chr1: 7557140-7565914 |
AT1G21580.2 | 7844 | Chr1: 7557140-7565914 |
AT1G21580.6 | 7383 | Chr1: 7557162-7565803 |
AT1G21580.7 | 7374 | Chr1: 7557162-7565803 |
AT1G21580.5 | 7448 | Chr1: 7557162-7565803 |
AT1G21580.8 | 7658 | Chr1: 7557233-7565895 |
AT1G21580.9 | 5091 | Chr1: 7560565-7565655 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G21580:three_prime_UTR:8 | 682 | Chr1: 7557140-7557821 | Arabidopsis thaliana |
AT1G21580:three_prime_UTR:6 | 1361 | Chr1: 7557140-7558500 | Arabidopsis thaliana |
AT1G21580:three_prime_UTR:7 | 1305 | Chr1: 7557140-7558444 | Arabidopsis thaliana |
AT1G21580:three_prime_UTR:5 | 1453 | Chr1: 7557140-7558592 | Arabidopsis thaliana |
AT1G21580:three_prime_UTR:2 | 26 | Chr1: 7558475-7558500 | Arabidopsis thaliana |
AT1G21580:three_prime_UTR:4 | 1050 | Chr1: 7557162-7558211 | Arabidopsis thaliana |
AT1G21580:three_prime_UTR:1 | 118 | Chr1: 7558475-7558592 | Arabidopsis thaliana |
AT1G21580:three_prime_UTR:3 | 1268 | Chr1: 7557233-7558500 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...