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Gene : AT1G20823 A. thaliana

DB identifier  ? AT1G20823 Secondary Identifier  ? locus:2825708
Brief Description  RING/U-box superfamily protein
TAIR Computational Description  RING/U-box superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a RING E3 ubiquitin ligase ATL80. Involved in phosphate mobilization and cold stress response in sufficient phosphate growth conditions. The mRNA is cell-to-cell mobile.
TAIR Short Description  RING/U-box superfamily protein
TAIR Aliases  AtATL80, ATL80

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1006  
Location: Chr1:7238693-7239698

Gene models - AT1G20823 AT1G20823

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ATL80_ARATH function May be involved in the early steps of the plant defense signaling pathway.
ATL80_ARATH pathway Protein modification; protein ubiquitination.
ATL80_ARATH similarity Belongs to the RING-type zinc finger family. ATL subfamily.

1 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
molecular function
ubiquitin protein ligase activity  ? ECO  
metal ion binding  ? ECO  
biological process
cellular response to cold  ? ECO  
defense response  ? ECO  
protein ubiquitination  ? ECO  
regulation of phosphate transport  ? ECO  
regulation of flower development  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets