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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18180:CDS:1 | 51 | Chr1: 6255903-6255953 | Arabidopsis thaliana |
AT1G18180:CDS:2 | 70 | Chr1: 6256053-6256122 | Arabidopsis thaliana |
AT1G18180:CDS:3 | 68 | Chr1: 6256259-6256326 | Arabidopsis thaliana |
AT1G18180:CDS:4 | 62 | Chr1: 6256402-6256463 | Arabidopsis thaliana |
AT1G18180:CDS:5 | 82 | Chr1: 6256563-6256644 | Arabidopsis thaliana |
AT1G18180:CDS:6 | 234 | Chr1: 6256761-6256994 | Arabidopsis thaliana |
AT1G18180:CDS:7 | 129 | Chr1: 6257103-6257231 | Arabidopsis thaliana |
AT1G18180:CDS:8 | 62 | Chr1: 6257319-6257380 | Arabidopsis thaliana |
AT1G18180:CDS:9 | 117 | Chr1: 6257477-6257593 | Arabidopsis thaliana |
AT1G18180:CDS:11 | 1 | Chr1: 6257701-6257701 | Arabidopsis thaliana |
AT1G18180:CDS:1.1 | 51 | Chr1: 6255903-6255953 | Arabidopsis thaliana |
AT1G18180:CDS:2.1 | 70 | Chr1: 6256053-6256122 | Arabidopsis thaliana |
AT1G18180:CDS:3.1 | 68 | Chr1: 6256259-6256326 | Arabidopsis thaliana |
AT1G18180:CDS:4.1 | 62 | Chr1: 6256402-6256463 | Arabidopsis thaliana |
AT1G18180:CDS:5.1 | 82 | Chr1: 6256563-6256644 | Arabidopsis thaliana |
AT1G18180:CDS:6.1 | 234 | Chr1: 6256761-6256994 | Arabidopsis thaliana |
AT1G18180:CDS:7.1 | 129 | Chr1: 6257103-6257231 | Arabidopsis thaliana |
AT1G18180:CDS:8.1 | 62 | Chr1: 6257319-6257380 | Arabidopsis thaliana |
AT1G18180:CDS:9.1 | 117 | Chr1: 6257477-6257593 | Arabidopsis thaliana |
AT1G18180:CDS:10 | 43 | Chr1: 6257695-6257737 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18180:exon:1 | 218 | Chr1: 6255736-6255953 | Arabidopsis thaliana |
AT1G18180:exon:12 | 1 | Chr1: 6257701-6257701 | Arabidopsis thaliana |
AT1G18180:exon:2 | 169 | Chr1: 6255785-6255953 | Arabidopsis thaliana |
AT1G18180:exon:3 | 70 | Chr1: 6256053-6256122 | Arabidopsis thaliana |
AT1G18180:exon:4 | 68 | Chr1: 6256259-6256326 | Arabidopsis thaliana |
AT1G18180:exon:5 | 62 | Chr1: 6256402-6256463 | Arabidopsis thaliana |
AT1G18180:exon:6 | 82 | Chr1: 6256563-6256644 | Arabidopsis thaliana |
AT1G18180:exon:7 | 234 | Chr1: 6256761-6256994 | Arabidopsis thaliana |
AT1G18180:exon:8 | 129 | Chr1: 6257103-6257231 | Arabidopsis thaliana |
AT1G18180:exon:9 | 62 | Chr1: 6257319-6257380 | Arabidopsis thaliana |
AT1G18180:exon:10 | 117 | Chr1: 6257477-6257593 | Arabidopsis thaliana |
AT1G18180:exon:11 | 206 | Chr1: 6257695-6257900 | Arabidopsis thaliana |
AT1G18190:exon:10 | 478 | Chr1: 6257851-6258328 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18180:five_prime_UTR:1 | 167 | Chr1: 6255736-6255902 | Arabidopsis thaliana |
AT1G18180:five_prime_UTR:2 | 118 | Chr1: 6255785-6255902 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G18190 | locus:2194075 | GC2 | golgin candidate 2 | 3651 | Chr1: 6257851-6261501 | A. thaliana | golgin Putative 2;(source:Araport11) | This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508�668 aa) portion of the protein. | golgin candidate 2 | GC2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G18180.2 | 1043 | Chr1: 6255736-6257701 |
AT1G18180.1 | 1199 | Chr1: 6255785-6257900 |
AT1G18190.1 | 2295 | Chr1: 6257851-6261501 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18180:three_prime_UTR:1 | 163 | Chr1: 6257738-6257900 | Arabidopsis thaliana |
AT1G18190:three_prime_UTR:1 | 112 | Chr1: 6257851-6257962 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...