External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18090:CDS:1 | 78 | Chr1: 6224539-6224616 | Arabidopsis thaliana |
AT1G18090:CDS:2 | 37 | Chr1: 6224751-6224787 | Arabidopsis thaliana |
AT1G18090:CDS:3 | 175 | Chr1: 6224974-6225148 | Arabidopsis thaliana |
AT1G18090:CDS:5 | 79 | Chr1: 6225246-6225324 | Arabidopsis thaliana |
AT1G18090:CDS:7 | 45 | Chr1: 6225744-6225788 | Arabidopsis thaliana |
AT1G18090:CDS:8 | 150 | Chr1: 6225866-6226015 | Arabidopsis thaliana |
AT1G18090:CDS:9 | 115 | Chr1: 6226114-6226228 | Arabidopsis thaliana |
AT1G18090:CDS:10 | 101 | Chr1: 6226314-6226414 | Arabidopsis thaliana |
AT1G18090:CDS:11 | 98 | Chr1: 6226500-6226597 | Arabidopsis thaliana |
AT1G18090:CDS:12 | 93 | Chr1: 6226681-6226773 | Arabidopsis thaliana |
AT1G18090:CDS:13 | 763 | Chr1: 6226953-6227715 | Arabidopsis thaliana |
AT1G18090:CDS:1.1 | 78 | Chr1: 6224539-6224616 | Arabidopsis thaliana |
AT1G18090:CDS:2.1 | 37 | Chr1: 6224751-6224787 | Arabidopsis thaliana |
AT1G18090:CDS:4 | 179 | Chr1: 6224974-6225152 | Arabidopsis thaliana |
AT1G18090:CDS:6 | 75 | Chr1: 6225250-6225324 | Arabidopsis thaliana |
AT1G18090:CDS:7.1 | 45 | Chr1: 6225744-6225788 | Arabidopsis thaliana |
AT1G18090:CDS:8.1 | 150 | Chr1: 6225866-6226015 | Arabidopsis thaliana |
AT1G18090:CDS:9.1 | 115 | Chr1: 6226114-6226228 | Arabidopsis thaliana |
AT1G18090:CDS:10.1 | 101 | Chr1: 6226314-6226414 | Arabidopsis thaliana |
AT1G18090:CDS:11.1 | 98 | Chr1: 6226500-6226597 | Arabidopsis thaliana |
AT1G18090:CDS:12.1 | 93 | Chr1: 6226681-6226773 | Arabidopsis thaliana |
AT1G18090:CDS:13.1 | 763 | Chr1: 6226953-6227715 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18090:exon:1 | 212 | Chr1: 6224405-6224616 | Arabidopsis thaliana |
AT1G18090:exon:4 | 175 | Chr1: 6224974-6225148 | Arabidopsis thaliana |
AT1G18090:exon:6 | 79 | Chr1: 6225246-6225324 | Arabidopsis thaliana |
AT1G18090:exon:2 | 113 | Chr1: 6224504-6224616 | Arabidopsis thaliana |
AT1G18090:exon:3 | 37 | Chr1: 6224751-6224787 | Arabidopsis thaliana |
AT1G18090:exon:5 | 179 | Chr1: 6224974-6225152 | Arabidopsis thaliana |
AT1G18090:exon:7 | 75 | Chr1: 6225250-6225324 | Arabidopsis thaliana |
AT1G18090:exon:8 | 45 | Chr1: 6225744-6225788 | Arabidopsis thaliana |
AT1G18090:exon:9 | 150 | Chr1: 6225866-6226015 | Arabidopsis thaliana |
AT1G18090:exon:10 | 115 | Chr1: 6226114-6226228 | Arabidopsis thaliana |
AT1G18090:exon:11 | 101 | Chr1: 6226314-6226414 | Arabidopsis thaliana |
AT1G18090:exon:12 | 98 | Chr1: 6226500-6226597 | Arabidopsis thaliana |
AT1G18090:exon:13 | 93 | Chr1: 6226681-6226773 | Arabidopsis thaliana |
AT1G18090:exon:14 | 870 | Chr1: 6226953-6227822 | Arabidopsis thaliana |
AT1G18100:exon:4 | 1056 | Chr1: 6227217-6228272 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18090:five_prime_UTR:1 | 134 | Chr1: 6224405-6224538 | Arabidopsis thaliana |
AT1G18090:five_prime_UTR:2 | 35 | Chr1: 6224504-6224538 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G18100 | locus:2194100 | E12A11 | 2978 | Chr1: 6227217-6230194 | A. thaliana | PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) | Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed. | PEBP (phosphatidylethanolamine-binding protein) family protein | E12A11, MFT |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G18090.1 | 1975 | Chr1: 6224405-6227822 |
AT1G18090.2 | 1876 | Chr1: 6224504-6227822 |
AT1G18100.1 | 1438 | Chr1: 6227217-6230194 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18090:three_prime_UTR:1 | 107 | Chr1: 6227716-6227822 | Arabidopsis thaliana |
AT1G18100:three_prime_UTR:1 | 832 | Chr1: 6227217-6228048 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
nuclease activity | ECO |
DNA binding | ECO |
metal ion binding | ECO |
biological process | |
DNA repair | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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