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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18070:CDS:20 | 59 | Chr1: 6214236-6214294 | Arabidopsis thaliana |
AT1G18070:CDS:19 | 73 | Chr1: 6214378-6214450 | Arabidopsis thaliana |
AT1G18070:CDS:18 | 165 | Chr1: 6214585-6214749 | Arabidopsis thaliana |
AT1G18070:CDS:17 | 65 | Chr1: 6214830-6214894 | Arabidopsis thaliana |
AT1G18070:CDS:16 | 136 | Chr1: 6215018-6215153 | Arabidopsis thaliana |
AT1G18070:CDS:15 | 106 | Chr1: 6215239-6215344 | Arabidopsis thaliana |
AT1G18070:CDS:13 | 151 | Chr1: 6215593-6215743 | Arabidopsis thaliana |
AT1G18070:CDS:12 | 65 | Chr1: 6215827-6215891 | Arabidopsis thaliana |
AT1G18070:CDS:11 | 155 | Chr1: 6215979-6216133 | Arabidopsis thaliana |
AT1G18070:CDS:10 | 63 | Chr1: 6216227-6216289 | Arabidopsis thaliana |
AT1G18070:CDS:9 | 72 | Chr1: 6216415-6216486 | Arabidopsis thaliana |
AT1G18070:CDS:8 | 46 | Chr1: 6216629-6216674 | Arabidopsis thaliana |
AT1G18070:CDS:7 | 112 | Chr1: 6216758-6216869 | Arabidopsis thaliana |
AT1G18070:CDS:6 | 105 | Chr1: 6217081-6217185 | Arabidopsis thaliana |
AT1G18070:CDS:5 | 54 | Chr1: 6217294-6217347 | Arabidopsis thaliana |
AT1G18070:CDS:4 | 51 | Chr1: 6217453-6217503 | Arabidopsis thaliana |
AT1G18070:CDS:3 | 75 | Chr1: 6217580-6217654 | Arabidopsis thaliana |
AT1G18070:CDS:2 | 42 | Chr1: 6217737-6217778 | Arabidopsis thaliana |
AT1G18070:CDS:1 | 4 | Chr1: 6218208-6218211 | Arabidopsis thaliana |
AT1G18070:CDS:20.1 | 59 | Chr1: 6214236-6214294 | Arabidopsis thaliana |
AT1G18070:CDS:19.1 | 73 | Chr1: 6214378-6214450 | Arabidopsis thaliana |
AT1G18070:CDS:18.1 | 165 | Chr1: 6214585-6214749 | Arabidopsis thaliana |
AT1G18070:CDS:17.1 | 65 | Chr1: 6214830-6214894 | Arabidopsis thaliana |
AT1G18070:CDS:16.1 | 136 | Chr1: 6215018-6215153 | Arabidopsis thaliana |
AT1G18070:CDS:15.1 | 106 | Chr1: 6215239-6215344 | Arabidopsis thaliana |
AT1G18070:CDS:13.1 | 151 | Chr1: 6215593-6215743 | Arabidopsis thaliana |
AT1G18070:CDS:12.1 | 65 | Chr1: 6215827-6215891 | Arabidopsis thaliana |
AT1G18070:CDS:11.1 | 155 | Chr1: 6215979-6216133 | Arabidopsis thaliana |
AT1G18070:CDS:10.1 | 63 | Chr1: 6216227-6216289 | Arabidopsis thaliana |
AT1G18070:CDS:9.1 | 72 | Chr1: 6216415-6216486 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18070:exon:25 | 460 | Chr1: 6213651-6214110 | Arabidopsis thaliana |
AT1G18070:exon:1 | 177 | Chr1: 6218208-6218384 | Arabidopsis thaliana |
AT1G18070:exon:24 | 371 | Chr1: 6213743-6214113 | Arabidopsis thaliana |
AT1G18070:exon:17 | 106 | Chr1: 6215239-6215344 | Arabidopsis thaliana |
AT1G18070:exon:3 | 128 | Chr1: 6218208-6218335 | Arabidopsis thaliana |
AT1G18070:exon:23 | 337 | Chr1: 6213777-6214113 | Arabidopsis thaliana |
AT1G18070:exon:22 | 81 | Chr1: 6214214-6214294 | Arabidopsis thaliana |
AT1G18070:exon:21 | 73 | Chr1: 6214378-6214450 | Arabidopsis thaliana |
AT1G18070:exon:20 | 165 | Chr1: 6214585-6214749 | Arabidopsis thaliana |
AT1G18070:exon:19 | 65 | Chr1: 6214830-6214894 | Arabidopsis thaliana |
AT1G18070:exon:18 | 136 | Chr1: 6215018-6215153 | Arabidopsis thaliana |
AT1G18070:exon:16 | 139 | Chr1: 6215239-6215377 | Arabidopsis thaliana |
AT1G18070:exon:15 | 151 | Chr1: 6215593-6215743 | Arabidopsis thaliana |
AT1G18070:exon:14 | 65 | Chr1: 6215827-6215891 | Arabidopsis thaliana |
AT1G18070:exon:13 | 155 | Chr1: 6215979-6216133 | Arabidopsis thaliana |
AT1G18070:exon:12 | 63 | Chr1: 6216227-6216289 | Arabidopsis thaliana |
AT1G18070:exon:11 | 72 | Chr1: 6216415-6216486 | Arabidopsis thaliana |
AT1G18070:exon:10 | 46 | Chr1: 6216629-6216674 | Arabidopsis thaliana |
AT1G18070:exon:9 | 112 | Chr1: 6216758-6216869 | Arabidopsis thaliana |
AT1G18070:exon:8 | 105 | Chr1: 6217081-6217185 | Arabidopsis thaliana |
AT1G18070:exon:7 | 54 | Chr1: 6217294-6217347 | Arabidopsis thaliana |
AT1G18070:exon:6 | 51 | Chr1: 6217453-6217503 | Arabidopsis thaliana |
AT1G18070:exon:5 | 75 | Chr1: 6217580-6217654 | Arabidopsis thaliana |
AT1G18070:exon:4 | 42 | Chr1: 6217737-6217778 | Arabidopsis thaliana |
AT1G18070:exon:2 | 133 | Chr1: 6218208-6218340 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18070:five_prime_UTR:1 | 173 | Chr1: 6218212-6218384 | Arabidopsis thaliana |
AT1G18070:five_prime_UTR:3 | 124 | Chr1: 6218212-6218335 | Arabidopsis thaliana |
AT1G18070:five_prime_UTR:2 | 129 | Chr1: 6218212-6218340 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G18070.1 | 2254 | Chr1: 6213651-6218384 |
AT1G18070.2 | 2116 | Chr1: 6213743-6218335 |
AT1G18070.3 | 2120 | Chr1: 6213777-6218340 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G18070:three_prime_UTR:4 | 460 | Chr1: 6213651-6214110 | Arabidopsis thaliana |
AT1G18070:three_prime_UTR:3 | 371 | Chr1: 6213743-6214113 | Arabidopsis thaliana |
AT1G18070:three_prime_UTR:2 | 337 | Chr1: 6213777-6214113 | Arabidopsis thaliana |
AT1G18070:three_prime_UTR:1 | 22 | Chr1: 6214214-6214235 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
Q8L835_ARATH Q9LMS7_ARATH | function | This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. |
Q8L835_ARATH Q9LMS7_ARATH | similarity | Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
translation release factor activity | ECO |
translation elongation factor activity | ECO |
GTPase activity | ECO |
GTP binding | ECO |
biological process | |
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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