External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17680:CDS:1 | 314 | Chr1: 6076388-6076701 | Arabidopsis thaliana |
AT1G17680:CDS:2 | 88 | Chr1: 6076920-6077007 | Arabidopsis thaliana |
AT1G17680:CDS:3 | 108 | Chr1: 6077140-6077247 | Arabidopsis thaliana |
AT1G17680:CDS:4 | 185 | Chr1: 6077487-6077671 | Arabidopsis thaliana |
AT1G17680:CDS:5 | 196 | Chr1: 6078021-6078216 | Arabidopsis thaliana |
AT1G17680:CDS:6 | 258 | Chr1: 6078344-6078601 | Arabidopsis thaliana |
AT1G17680:CDS:7 | 220 | Chr1: 6079037-6079256 | Arabidopsis thaliana |
AT1G17680:CDS:8 | 114 | Chr1: 6079537-6079650 | Arabidopsis thaliana |
AT1G17680:CDS:9 | 146 | Chr1: 6079973-6080118 | Arabidopsis thaliana |
AT1G17680:CDS:10 | 86 | Chr1: 6080363-6080448 | Arabidopsis thaliana |
AT1G17680:CDS:11 | 118 | Chr1: 6080542-6080659 | Arabidopsis thaliana |
AT1G17680:CDS:12 | 45 | Chr1: 6080889-6080933 | Arabidopsis thaliana |
AT1G17680:CDS:13 | 127 | Chr1: 6081082-6081208 | Arabidopsis thaliana |
AT1G17680:CDS:14 | 115 | Chr1: 6081296-6081410 | Arabidopsis thaliana |
AT1G17680:CDS:15 | 191 | Chr1: 6081497-6081687 | Arabidopsis thaliana |
AT1G17680:CDS:16 | 380 | Chr1: 6081781-6082160 | Arabidopsis thaliana |
AT1G17680:CDS:1.1 | 314 | Chr1: 6076388-6076701 | Arabidopsis thaliana |
AT1G17680:CDS:2.1 | 88 | Chr1: 6076920-6077007 | Arabidopsis thaliana |
AT1G17680:CDS:3.1 | 108 | Chr1: 6077140-6077247 | Arabidopsis thaliana |
AT1G17680:CDS:4.1 | 185 | Chr1: 6077487-6077671 | Arabidopsis thaliana |
AT1G17680:CDS:5.1 | 196 | Chr1: 6078021-6078216 | Arabidopsis thaliana |
AT1G17680:CDS:6.1 | 258 | Chr1: 6078344-6078601 | Arabidopsis thaliana |
AT1G17680:CDS:7.1 | 220 | Chr1: 6079037-6079256 | Arabidopsis thaliana |
AT1G17680:CDS:8.1 | 114 | Chr1: 6079537-6079650 | Arabidopsis thaliana |
AT1G17680:CDS:9.1 | 146 | Chr1: 6079973-6080118 | Arabidopsis thaliana |
AT1G17680:CDS:10.1 | 86 | Chr1: 6080363-6080448 | Arabidopsis thaliana |
AT1G17680:CDS:11.1 | 118 | Chr1: 6080542-6080659 | Arabidopsis thaliana |
AT1G17680:CDS:12.1 | 45 | Chr1: 6080889-6080933 | Arabidopsis thaliana |
AT1G17680:CDS:13.1 | 127 | Chr1: 6081082-6081208 | Arabidopsis thaliana |
AT1G17680:CDS:14.1 | 115 | Chr1: 6081296-6081410 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17680:exon:1 | 124 | Chr1: 6076071-6076194 | Arabidopsis thaliana |
AT1G17680:exon:5 | 314 | Chr1: 6076388-6076701 | Arabidopsis thaliana |
AT1G17680:exon:22 | 615 | Chr1: 6081781-6082395 | Arabidopsis thaliana |
AT1G17680:exon:2 | 118 | Chr1: 6076077-6076194 | Arabidopsis thaliana |
AT1G17680:exon:4 | 384 | Chr1: 6076318-6076701 | Arabidopsis thaliana |
AT1G17680:exon:20 | 587 | Chr1: 6081781-6082367 | Arabidopsis thaliana |
AT1G17680:exon:3 | 625 | Chr1: 6076077-6076701 | Arabidopsis thaliana |
AT1G17680:exon:6 | 88 | Chr1: 6076920-6077007 | Arabidopsis thaliana |
AT1G17680:exon:7 | 108 | Chr1: 6077140-6077247 | Arabidopsis thaliana |
AT1G17680:exon:8 | 185 | Chr1: 6077487-6077671 | Arabidopsis thaliana |
AT1G17680:exon:9 | 196 | Chr1: 6078021-6078216 | Arabidopsis thaliana |
AT1G17680:exon:10 | 258 | Chr1: 6078344-6078601 | Arabidopsis thaliana |
AT1G17680:exon:11 | 220 | Chr1: 6079037-6079256 | Arabidopsis thaliana |
AT1G17680:exon:12 | 114 | Chr1: 6079537-6079650 | Arabidopsis thaliana |
AT1G17680:exon:13 | 146 | Chr1: 6079973-6080118 | Arabidopsis thaliana |
AT1G17680:exon:14 | 86 | Chr1: 6080363-6080448 | Arabidopsis thaliana |
AT1G17680:exon:15 | 118 | Chr1: 6080542-6080659 | Arabidopsis thaliana |
AT1G17680:exon:16 | 45 | Chr1: 6080889-6080933 | Arabidopsis thaliana |
AT1G17680:exon:17 | 127 | Chr1: 6081082-6081208 | Arabidopsis thaliana |
AT1G17680:exon:18 | 115 | Chr1: 6081296-6081410 | Arabidopsis thaliana |
AT1G17680:exon:19 | 191 | Chr1: 6081497-6081687 | Arabidopsis thaliana |
AT1G17680:exon:21 | 592 | Chr1: 6081781-6082372 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17680:five_prime_UTR:1 | 124 | Chr1: 6076071-6076194 | Arabidopsis thaliana |
AT1G17680:five_prime_UTR:2 | 118 | Chr1: 6076077-6076194 | Arabidopsis thaliana |
AT1G17680:five_prime_UTR:4 | 70 | Chr1: 6076318-6076387 | Arabidopsis thaliana |
AT1G17680:five_prime_UTR:3 | 311 | Chr1: 6076077-6076387 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G17680.2 | 3050 | Chr1: 6076071-6082395 |
AT1G17680.3 | 3086 | Chr1: 6076077-6082367 |
AT1G17680.1 | 3214 | Chr1: 6076077-6082372 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G17680:three_prime_UTR:3 | 235 | Chr1: 6082161-6082395 | Arabidopsis thaliana |
AT1G17680:three_prime_UTR:1 | 207 | Chr1: 6082161-6082367 | Arabidopsis thaliana |
AT1G17680:three_prime_UTR:2 | 212 | Chr1: 6082161-6082372 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
transcription by RNA polymerase III | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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