help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : AT1G16740 A. thaliana

DB identifier  ? AT1G16740 Secondary Identifier  ? locus:2015661
Brief Description  Ribosomal protein L20
TAIR Computational Description  Ribosomal protein L20;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Ribosomal protein L20
TAIR Aliases  bL20m

0 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1494  
Location: Chr1:5727622-5729115

Gene models - AT1G16740 AT1G16740

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A178WF80_ARATH function Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
A0A178WF80_ARATH similarity Belongs to the bacterial ribosomal protein bL20 family.

1 Proteins

Function

Gene Ontology

cellular component
ribosome  ? ECO  
ribonucleoprotein complex  ? ECO  
plastid  ? ECO  
molecular function
rRNA binding  ? ECO  
structural constituent of ribosome  ? ECO  
biological process
translation  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets