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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G16705:CDS:1 | 47 | Chr1: 5712469-5712515 | Arabidopsis thaliana |
AT1G16705:CDS:2 | 115 | Chr1: 5712877-5712991 | Arabidopsis thaliana |
AT1G16705:CDS:3 | 153 | Chr1: 5713181-5713333 | Arabidopsis thaliana |
AT1G16705:CDS:5 | 72 | Chr1: 5713451-5713522 | Arabidopsis thaliana |
AT1G16705:CDS:1.1 | 47 | Chr1: 5712469-5712515 | Arabidopsis thaliana |
AT1G16705:CDS:2.1 | 115 | Chr1: 5712877-5712991 | Arabidopsis thaliana |
AT1G16705:CDS:3.1 | 153 | Chr1: 5713181-5713333 | Arabidopsis thaliana |
AT1G16705:CDS:5.1 | 72 | Chr1: 5713451-5713522 | Arabidopsis thaliana |
AT1G16705:CDS:1.2 | 47 | Chr1: 5712469-5712515 | Arabidopsis thaliana |
AT1G16705:CDS:2.2 | 115 | Chr1: 5712877-5712991 | Arabidopsis thaliana |
AT1G16705:CDS:3.2 | 153 | Chr1: 5713181-5713333 | Arabidopsis thaliana |
AT1G16705:CDS:4 | 75 | Chr1: 5713448-5713522 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G16700:exon:9 | 445 | Chr1: 5711599-5712043 | Arabidopsis thaliana |
AT1G16705:exon:2 | 494 | Chr1: 5712022-5712515 | Arabidopsis thaliana |
AT1G16705:exon:1 | 212 | Chr1: 5712022-5712233 | Arabidopsis thaliana |
AT1G16705:exon:8 | 302 | Chr1: 5713451-5713752 | Arabidopsis thaliana |
AT1G16705:exon:3 | 146 | Chr1: 5712088-5712233 | Arabidopsis thaliana |
AT1G16705:exon:4 | 71 | Chr1: 5712445-5712515 | Arabidopsis thaliana |
AT1G16705:exon:5 | 115 | Chr1: 5712877-5712991 | Arabidopsis thaliana |
AT1G16705:exon:6 | 153 | Chr1: 5713181-5713333 | Arabidopsis thaliana |
AT1G16705:exon:7 | 305 | Chr1: 5713448-5713752 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G16705:five_prime_UTR:2 | 447 | Chr1: 5712022-5712468 | Arabidopsis thaliana |
AT1G16705:five_prime_UTR:1 | 212 | Chr1: 5712022-5712233 | Arabidopsis thaliana |
AT1G16705:five_prime_UTR:3 | 146 | Chr1: 5712088-5712233 | Arabidopsis thaliana |
AT1G16705:five_prime_UTR:4 | 24 | Chr1: 5712445-5712468 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G16700 | locus:2015636 | AT1G16700 | 2420 | Chr1: 5709624-5712043 | A. thaliana | Alpha-helical ferredoxin;(source:Araport11) | Part of mitochondrial complex I (CI), which plays a crucial role in oxidising NADH generated by the metabolism (including photorespiration) and thereby participates in the mitochondrial electron transfer chain feeding oxidative phosphorylation that generates ATP. | Alpha-helical ferredoxin | NDUFS8.1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G16700.1 | 1303 | Chr1: 5709624-5712043 |
AT1G16705.3 | 1064 | Chr1: 5712022-5713752 |
AT1G16705.1 | 853 | Chr1: 5712022-5713752 |
AT1G16705.2 | 790 | Chr1: 5712088-5713752 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G16700:three_prime_UTR:1 | 349 | Chr1: 5711695-5712043 | Arabidopsis thaliana |
AT1G16705:three_prime_UTR:1 | 230 | Chr1: 5713523-5713752 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...