External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G15490:CDS:8 | 240 | Chr1: 5321312-5321551 | Arabidopsis thaliana |
AT1G15490:CDS:6 | 129 | Chr1: 5321634-5321762 | Arabidopsis thaliana |
AT1G15490:CDS:5 | 717 | Chr1: 5321846-5322562 | Arabidopsis thaliana |
AT1G15490:CDS:3 | 308 | Chr1: 5322653-5322960 | Arabidopsis thaliana |
AT1G15490:CDS:1 | 265 | Chr1: 5323158-5323422 | Arabidopsis thaliana |
AT1G15490:CDS:10 | 123 | Chr1: 5320859-5320981 | Arabidopsis thaliana |
AT1G15490:CDS:9 | 201 | Chr1: 5321076-5321276 | Arabidopsis thaliana |
AT1G15490:CDS:7 | 204 | Chr1: 5321348-5321551 | Arabidopsis thaliana |
AT1G15490:CDS:6.1 | 129 | Chr1: 5321634-5321762 | Arabidopsis thaliana |
AT1G15490:CDS:5.1 | 717 | Chr1: 5321846-5322562 | Arabidopsis thaliana |
AT1G15490:CDS:2 | 360 | Chr1: 5322653-5323012 | Arabidopsis thaliana |
AT1G15490:CDS:10.1 | 123 | Chr1: 5320859-5320981 | Arabidopsis thaliana |
AT1G15490:CDS:9.1 | 201 | Chr1: 5321076-5321276 | Arabidopsis thaliana |
AT1G15490:CDS:7.1 | 204 | Chr1: 5321348-5321551 | Arabidopsis thaliana |
AT1G15490:CDS:6.2 | 129 | Chr1: 5321634-5321762 | Arabidopsis thaliana |
AT1G15490:CDS:5.2 | 717 | Chr1: 5321846-5322562 | Arabidopsis thaliana |
AT1G15490:CDS:4 | 117 | Chr1: 5322653-5322769 | Arabidopsis thaliana |
AT1G15490:CDS:10.2 | 123 | Chr1: 5320859-5320981 | Arabidopsis thaliana |
AT1G15490:CDS:9.2 | 201 | Chr1: 5321076-5321276 | Arabidopsis thaliana |
AT1G15490:CDS:7.2 | 204 | Chr1: 5321348-5321551 | Arabidopsis thaliana |
AT1G15490:CDS:6.3 | 129 | Chr1: 5321634-5321762 | Arabidopsis thaliana |
AT1G15490:CDS:5.3 | 717 | Chr1: 5321846-5322562 | Arabidopsis thaliana |
AT1G15490:CDS:3.1 | 308 | Chr1: 5322653-5322960 | Arabidopsis thaliana |
AT1G15490:CDS:1.1 | 265 | Chr1: 5323158-5323422 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G15480:exon:4 | 1456 | Chr1: 5319175-5320630 | Arabidopsis thaliana |
AT1G15490:exon:8 | 476 | Chr1: 5321076-5321551 | Arabidopsis thaliana |
AT1G15490:exon:3 | 1243 | Chr1: 5322653-5323895 | Arabidopsis thaliana |
AT1G15490:exon:2 | 743 | Chr1: 5323153-5323895 | Arabidopsis thaliana |
AT1G15490:exon:10 | 367 | Chr1: 5320615-5320981 | Arabidopsis thaliana |
AT1G15490:exon:9 | 201 | Chr1: 5321076-5321276 | Arabidopsis thaliana |
AT1G15490:exon:7 | 204 | Chr1: 5321348-5321551 | Arabidopsis thaliana |
AT1G15490:exon:6 | 129 | Chr1: 5321634-5321762 | Arabidopsis thaliana |
AT1G15490:exon:5 | 717 | Chr1: 5321846-5322562 | Arabidopsis thaliana |
AT1G15490:exon:4 | 308 | Chr1: 5322653-5322960 | Arabidopsis thaliana |
AT1G15490:exon:1 | 738 | Chr1: 5323158-5323895 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G15490:five_prime_UTR:3 | 883 | Chr1: 5323013-5323895 | Arabidopsis thaliana |
AT1G15490:five_prime_UTR:4 | 191 | Chr1: 5322770-5322960 | Arabidopsis thaliana |
AT1G15490:five_prime_UTR:2 | 743 | Chr1: 5323153-5323895 | Arabidopsis thaliana |
AT1G15490:five_prime_UTR:1 | 473 | Chr1: 5323423-5323895 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G15480 | locus:2037823 | AT1G15480 | 2658 | Chr1: 5317973-5320630 | A. thaliana | Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) | PPR motif containing protein. Found in mitochondria. Mutants flower early and have reduced levels of the ABI5, a regulator of FLC expression. | Tetratricopeptide repeat (TPR)-like superfamily protein | POCO1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G15480.1 | 2155 | Chr1: 5317973-5320630 |
AT1G15490.3 | 2735 | Chr1: 5320615-5323895 |
AT1G15490.2 | 2861 | Chr1: 5320615-5323895 |
AT1G15490.4 | 2669 | Chr1: 5320615-5323895 |
AT1G15490.1 | 2664 | Chr1: 5320615-5323895 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G15480:three_prime_UTR:1 | 208 | Chr1: 5320423-5320630 | Arabidopsis thaliana |
AT1G15490:three_prime_UTR:2 | 367 | Chr1: 5320615-5320981 | Arabidopsis thaliana |
AT1G15490:three_prime_UTR:1 | 236 | Chr1: 5321076-5321311 | Arabidopsis thaliana |
AT1G15490:three_prime_UTR:3 | 244 | Chr1: 5320615-5320858 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...