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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G15350:CDS:6 | 54 | Chr1: 5278481-5278534 | Arabidopsis thaliana |
AT1G15350:CDS:5 | 70 | Chr1: 5278606-5278675 | Arabidopsis thaliana |
AT1G15350:CDS:4 | 91 | Chr1: 5278764-5278854 | Arabidopsis thaliana |
AT1G15350:CDS:3 | 112 | Chr1: 5278945-5279056 | Arabidopsis thaliana |
AT1G15350:CDS:6.1 | 54 | Chr1: 5278481-5278534 | Arabidopsis thaliana |
AT1G15350:CDS:5.1 | 70 | Chr1: 5278606-5278675 | Arabidopsis thaliana |
AT1G15350:CDS:4.1 | 91 | Chr1: 5278764-5278854 | Arabidopsis thaliana |
AT1G15350:CDS:3.1 | 112 | Chr1: 5278945-5279056 | Arabidopsis thaliana |
AT1G15350:CDS:6.2 | 54 | Chr1: 5278481-5278534 | Arabidopsis thaliana |
AT1G15350:CDS:5.2 | 70 | Chr1: 5278606-5278675 | Arabidopsis thaliana |
AT1G15350:CDS:4.2 | 91 | Chr1: 5278764-5278854 | Arabidopsis thaliana |
AT1G15350:CDS:3.2 | 112 | Chr1: 5278945-5279056 | Arabidopsis thaliana |
AT1G15350:CDS:6.3 | 54 | Chr1: 5278481-5278534 | Arabidopsis thaliana |
AT1G15350:CDS:5.3 | 70 | Chr1: 5278606-5278675 | Arabidopsis thaliana |
AT1G15350:CDS:4.3 | 91 | Chr1: 5278764-5278854 | Arabidopsis thaliana |
AT1G15350:CDS:3.3 | 112 | Chr1: 5278945-5279056 | Arabidopsis thaliana |
AT1G15350:CDS:6.4 | 54 | Chr1: 5278481-5278534 | Arabidopsis thaliana |
AT1G15350:CDS:5.4 | 70 | Chr1: 5278606-5278675 | Arabidopsis thaliana |
AT1G15350:CDS:4.4 | 91 | Chr1: 5278764-5278854 | Arabidopsis thaliana |
AT1G15350:CDS:2 | 245 | Chr1: 5278945-5279189 | Arabidopsis thaliana |
AT1G15350:CDS:1 | 5 | Chr1: 5279482-5279486 | Arabidopsis thaliana |
AT1G15350:CDS:6.5 | 54 | Chr1: 5278481-5278534 | Arabidopsis thaliana |
AT1G15350:CDS:5.5 | 70 | Chr1: 5278606-5278675 | Arabidopsis thaliana |
AT1G15350:CDS:4.5 | 91 | Chr1: 5278764-5278854 | Arabidopsis thaliana |
AT1G15350:CDS:2.1 | 245 | Chr1: 5278945-5279189 | Arabidopsis thaliana |
AT1G15350:CDS:1.1 | 5 | Chr1: 5279482-5279486 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G15350:exon:18 | 508 | Chr1: 5278027-5278534 | Arabidopsis thaliana |
AT1G15350:exon:4 | 198 | Chr1: 5279703-5279900 | Arabidopsis thaliana |
AT1G15350:exon:9 | 173 | Chr1: 5279307-5279479 | Arabidopsis thaliana |
AT1G15350:exon:17 | 507 | Chr1: 5278028-5278534 | Arabidopsis thaliana |
AT1G15350:exon:2 | 276 | Chr1: 5279703-5279978 | Arabidopsis thaliana |
AT1G15350:exon:16 | 462 | Chr1: 5278073-5278534 | Arabidopsis thaliana |
AT1G15350:exon:10 | 250 | Chr1: 5278945-5279194 | Arabidopsis thaliana |
AT1G15350:exon:8 | 298 | Chr1: 5279307-5279604 | Arabidopsis thaliana |
AT1G15350:exon:1 | 286 | Chr1: 5279703-5279988 | Arabidopsis thaliana |
AT1G15350:exon:15 | 422 | Chr1: 5278113-5278534 | Arabidopsis thaliana |
AT1G15350:exon:7 | 93 | Chr1: 5279482-5279574 | Arabidopsis thaliana |
AT1G15350:exon:3 | 248 | Chr1: 5279703-5279950 | Arabidopsis thaliana |
AT1G15350:exon:14 | 275 | Chr1: 5278260-5278534 | Arabidopsis thaliana |
AT1G15350:exon:13 | 70 | Chr1: 5278606-5278675 | Arabidopsis thaliana |
AT1G15350:exon:12 | 91 | Chr1: 5278764-5278854 | Arabidopsis thaliana |
AT1G15350:exon:11 | 245 | Chr1: 5278945-5279189 | Arabidopsis thaliana |
AT1G15350:exon:6 | 123 | Chr1: 5279482-5279604 | Arabidopsis thaliana |
AT1G15350:exon:5 | 175 | Chr1: 5279703-5279877 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G15350:five_prime_UTR:9 | 93 | Chr1: 5279482-5279574 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:4 | 198 | Chr1: 5279703-5279900 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:11 | 173 | Chr1: 5279307-5279479 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:8 | 123 | Chr1: 5279482-5279604 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:2 | 276 | Chr1: 5279703-5279978 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:12 | 138 | Chr1: 5279057-5279194 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:10 | 298 | Chr1: 5279307-5279604 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:1 | 286 | Chr1: 5279703-5279988 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:7 | 88 | Chr1: 5279487-5279574 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:3 | 248 | Chr1: 5279703-5279950 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:6 | 118 | Chr1: 5279487-5279604 | Arabidopsis thaliana |
AT1G15350:five_prime_UTR:5 | 175 | Chr1: 5279703-5279877 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G15350.3 | 1210 | Chr1: 5278027-5279900 |
AT1G15350.5 | 1091 | Chr1: 5278028-5279479 |
AT1G15350.4 | 1317 | Chr1: 5278028-5279978 |
AT1G15350.6 | 1457 | Chr1: 5278073-5279988 |
AT1G15350.2 | 1169 | Chr1: 5278113-5279950 |
AT1G15350.1 | 979 | Chr1: 5278260-5279877 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G15350:three_prime_UTR:5 | 454 | Chr1: 5278027-5278480 | Arabidopsis thaliana |
AT1G15350:three_prime_UTR:4 | 453 | Chr1: 5278028-5278480 | Arabidopsis thaliana |
AT1G15350:three_prime_UTR:3 | 408 | Chr1: 5278073-5278480 | Arabidopsis thaliana |
AT1G15350:three_prime_UTR:2 | 368 | Chr1: 5278113-5278480 | Arabidopsis thaliana |
AT1G15350:three_prime_UTR:1 | 221 | Chr1: 5278260-5278480 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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