help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide

Oops!

Error: 403

Gene : CCMH A. thaliana

DB identifier  ? AT1G15220 Secondary Identifier  ? locus:2037718
Brief Description  cytochrome c biogenesis protein family
TAIR Computational Description  cytochrome c biogenesis protein family;(source:Araport11)
TAIR Curator Summary  Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2.
TAIR Short Description  cytochrome c biogenesis protein family
TAIR Aliases  ATCCMH, CCMH

1 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1513  
Location: Chr1:5240029-5241541 reverse strand

Gene models - CCMH AT1G15220

? Gene models

Transcripts: 2  Exons: 7  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

8 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CCMH_ARATH function Plays a central role in mitochondrial cytochrome c maturation. Probable component of a heme lyase complex involved in the reduction of apocytochrome c (PubMed:16236729). Forms a complex with CCMF proteins (CCMFC, CCMFN1 and CCMFN2) that performs the assembly of heme with c-type apocytochromes in mitochondria (PubMed:18644794).
CCMH_ARATH similarity Belongs to the CcmH/CycL/Ccl2/NrfF family.

1 Proteins

Function

Gene Ontology

cellular component
protein-containing complex  ? ECO  
mitochondrion  ? ECO  
mitochondrial inner membrane  ? ECO  
molecular function
oxidoreductase activity  ? ECO  
metal ion binding  ? ECO  
biological process
cytochrome complex assembly  ? ECO  
embryo development ending in seed dormancy  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets