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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G13000:CDS:14 | 102 | Chr1: 4436402-4436503 | Arabidopsis thaliana |
AT1G13000:CDS:13 | 36 | Chr1: 4436593-4436628 | Arabidopsis thaliana |
AT1G13000:CDS:12 | 75 | Chr1: 4436716-4436790 | Arabidopsis thaliana |
AT1G13000:CDS:10 | 121 | Chr1: 4436885-4437005 | Arabidopsis thaliana |
AT1G13000:CDS:9 | 57 | Chr1: 4437081-4437137 | Arabidopsis thaliana |
AT1G13000:CDS:8 | 114 | Chr1: 4437223-4437336 | Arabidopsis thaliana |
AT1G13000:CDS:7 | 102 | Chr1: 4437432-4437533 | Arabidopsis thaliana |
AT1G13000:CDS:6 | 116 | Chr1: 4437631-4437746 | Arabidopsis thaliana |
AT1G13000:CDS:5 | 84 | Chr1: 4437817-4437900 | Arabidopsis thaliana |
AT1G13000:CDS:4 | 105 | Chr1: 4438028-4438132 | Arabidopsis thaliana |
AT1G13000:CDS:3 | 150 | Chr1: 4438207-4438356 | Arabidopsis thaliana |
AT1G13000:CDS:2 | 112 | Chr1: 4438451-4438562 | Arabidopsis thaliana |
AT1G13000:CDS:1 | 32 | Chr1: 4438662-4438693 | Arabidopsis thaliana |
AT1G13000:CDS:14.1 | 102 | Chr1: 4436402-4436503 | Arabidopsis thaliana |
AT1G13000:CDS:13.1 | 36 | Chr1: 4436593-4436628 | Arabidopsis thaliana |
AT1G13000:CDS:12.1 | 75 | Chr1: 4436716-4436790 | Arabidopsis thaliana |
AT1G13000:CDS:10.1 | 121 | Chr1: 4436885-4437005 | Arabidopsis thaliana |
AT1G13000:CDS:9.1 | 57 | Chr1: 4437081-4437137 | Arabidopsis thaliana |
AT1G13000:CDS:8.1 | 114 | Chr1: 4437223-4437336 | Arabidopsis thaliana |
AT1G13000:CDS:7.1 | 102 | Chr1: 4437432-4437533 | Arabidopsis thaliana |
AT1G13000:CDS:6.1 | 116 | Chr1: 4437631-4437746 | Arabidopsis thaliana |
AT1G13000:CDS:5.1 | 84 | Chr1: 4437817-4437900 | Arabidopsis thaliana |
AT1G13000:CDS:4.1 | 105 | Chr1: 4438028-4438132 | Arabidopsis thaliana |
AT1G13000:CDS:3.1 | 150 | Chr1: 4438207-4438356 | Arabidopsis thaliana |
AT1G13000:CDS:2.1 | 112 | Chr1: 4438451-4438562 | Arabidopsis thaliana |
AT1G13000:CDS:1.1 | 32 | Chr1: 4438662-4438693 | Arabidopsis thaliana |
AT1G13000:CDS:11 | 148 | Chr1: 4436858-4437005 | Arabidopsis thaliana |
AT1G13000:CDS:9.2 | 57 | Chr1: 4437081-4437137 | Arabidopsis thaliana |
AT1G13000:CDS:8.2 | 114 | Chr1: 4437223-4437336 | Arabidopsis thaliana |
AT1G13000:CDS:7.2 | 102 | Chr1: 4437432-4437533 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G12990:exon:2 | 1648 | Chr1: 4434455-4436102 | Arabidopsis thaliana |
AT1G13000:exon:3 | 502 | Chr1: 4439138-4439639 | Arabidopsis thaliana |
AT1G13000:exon:20 | 403 | Chr1: 4436101-4436503 | Arabidopsis thaliana |
AT1G13000:exon:16 | 290 | Chr1: 4436716-4437005 | Arabidopsis thaliana |
AT1G13000:exon:1 | 264 | Chr1: 4439376-4439639 | Arabidopsis thaliana |
AT1G13000:exon:5 | 353 | Chr1: 4439112-4439464 | Arabidopsis thaliana |
AT1G13000:exon:19 | 399 | Chr1: 4436105-4436503 | Arabidopsis thaliana |
AT1G13000:exon:18 | 36 | Chr1: 4436593-4436628 | Arabidopsis thaliana |
AT1G13000:exon:17 | 75 | Chr1: 4436716-4436790 | Arabidopsis thaliana |
AT1G13000:exon:15 | 121 | Chr1: 4436885-4437005 | Arabidopsis thaliana |
AT1G13000:exon:14 | 57 | Chr1: 4437081-4437137 | Arabidopsis thaliana |
AT1G13000:exon:13 | 114 | Chr1: 4437223-4437336 | Arabidopsis thaliana |
AT1G13000:exon:12 | 102 | Chr1: 4437432-4437533 | Arabidopsis thaliana |
AT1G13000:exon:11 | 116 | Chr1: 4437631-4437746 | Arabidopsis thaliana |
AT1G13000:exon:10 | 84 | Chr1: 4437817-4437900 | Arabidopsis thaliana |
AT1G13000:exon:9 | 105 | Chr1: 4438028-4438132 | Arabidopsis thaliana |
AT1G13000:exon:8 | 150 | Chr1: 4438207-4438356 | Arabidopsis thaliana |
AT1G13000:exon:7 | 112 | Chr1: 4438451-4438562 | Arabidopsis thaliana |
AT1G13000:exon:6 | 103 | Chr1: 4438662-4438764 | Arabidopsis thaliana |
AT1G13000:exon:4 | 93 | Chr1: 4439138-4439230 | Arabidopsis thaliana |
AT1G13000:exon:2 | 185 | Chr1: 4439376-4439560 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G13000:five_prime_UTR:3 | 502 | Chr1: 4439138-4439639 | Arabidopsis thaliana |
AT1G13000:five_prime_UTR:1 | 264 | Chr1: 4439376-4439639 | Arabidopsis thaliana |
AT1G13000:five_prime_UTR:5 | 353 | Chr1: 4439112-4439464 | Arabidopsis thaliana |
AT1G13000:five_prime_UTR:6 | 71 | Chr1: 4438694-4438764 | Arabidopsis thaliana |
AT1G13000:five_prime_UTR:4 | 93 | Chr1: 4439138-4439230 | Arabidopsis thaliana |
AT1G13000:five_prime_UTR:2 | 185 | Chr1: 4439376-4439560 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G12990 | locus:2031800 | AT1G12990 | 2498 | Chr1: 4433605-4436102 | A. thaliana | beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11) | NULL | beta-1,4-N-acetylglucosaminyltransferase family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G12990.1 | 2097 | Chr1: 4433605-4436102 |
AT1G13000.1 | 2080 | Chr1: 4436101-4439639 |
AT1G13000.2 | 1842 | Chr1: 4436101-4439639 |
AT1G13000.3 | 1936 | Chr1: 4436101-4439639 |
AT1G13000.4 | 1927 | Chr1: 4436105-4439464 |
AT1G13000.5 | 1852 | Chr1: 4436105-4439560 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G12990:three_prime_UTR:1 | 550 | Chr1: 4435553-4436102 | Arabidopsis thaliana |
AT1G13000:three_prime_UTR:5 | 301 | Chr1: 4436101-4436401 | Arabidopsis thaliana |
AT1G13000:three_prime_UTR:4 | 403 | Chr1: 4436101-4436503 | Arabidopsis thaliana |
AT1G13000:three_prime_UTR:2 | 36 | Chr1: 4436593-4436628 | Arabidopsis thaliana |
AT1G13000:three_prime_UTR:1 | 142 | Chr1: 4436716-4436857 | Arabidopsis thaliana |
AT1G13000:three_prime_UTR:3 | 297 | Chr1: 4436105-4436401 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...