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Gene : ATAN11 A. thaliana

DB identifier  ? AT1G12910 Secondary Identifier  ? locus:2010356
Name  ? ANTHOCYANIN11 Brief Description  Transducin/WD40 repeat-like superfamily protein
TAIR Computational Description  Transducin/WD40 repeat-like superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes LIGHT-REGULATED WD1 (LWD1), a clock proteins regulating circadian period length and photoperiodic flowering.
TAIR Short Description  Transducin/WD40 repeat-like superfamily protein
TAIR Aliases  ATAN11, LWD1

3 Gene Rifs

1 Organism

15 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1395  
Location: Chr1:4394897-4396291 reverse strand

Gene models - ATAN11 AT1G12910

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
LWD1_ARATH developmental stage Exhibits circadian rhythm expression.
LWD1_ARATH function Clock protein essential for the proper expression phase and period length of both the oscillator and output genes known to participate in photoperiod sensing. Required for the expression of APRR9, APRR7, and APRR5. Regulated by APRR9 and APRR7 at the transcriptional level, indicating the existence of a positive feedback loop within the circadian clock (PubMed:21357491). May function to delay the expression of the morning genes until dawn approaches.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
transcription cis-regulatory region binding  ? ECO  
biological process
entrainment of circadian clock by photoperiod  ? ECO  
photoperiodism, flowering  ? ECO  
anthocyanin-containing compound biosynthetic process  ? ECO  
rhythmic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets