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Gene : AT1G12800 A. thaliana

DB identifier  ? AT1G12800 Secondary Identifier  ? locus:2010336
Brief Description  Nucleic acid-binding, OB-fold-like protein
TAIR Computational Description  Nucleic acid-binding, OB-fold-like protein;(source:Araport11)
TAIR Curator Summary  SDP is a chloroplast localized RNA binding protein that is required for plastid rRNA processing. Plants harboring a mutation in SDP have numerous defects including reduced chlorophyll content, poor growth, yellow leaves and abnormal chloroplasts.
TAIR Short Description  Nucleic acid-binding, OB-fold-like protein
TAIR Aliases  SDP

0 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3864  
Location: Chr1:4361551-4365414 reverse strand

Gene models - AT1G12800 AT1G12800

? Gene models

Transcripts: 1  Exons: 13  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

14 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

1 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
chloroplast  ? ECO  
molecular function
rRNA binding  ? ECO  
mRNA binding  ? ECO  
biological process
chloroplast rRNA processing  ? ECO  
RNA folding  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets