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Gene : AT1G11780 A. thaliana

DB identifier  ? AT1G11780 Secondary Identifier  ? locus:2027347
Brief Description  oxidoreductase, 2OG-Fe(II) oxygenase family protein
TAIR Computational Description  oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  oxidoreductase, 2OG-Fe(II) oxygenase family protein

0 Gene Rifs

1 Organism

2 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2399  
Location: Chr1:3976839-3979237 reverse strand

Gene models - AT1G11780 AT1G11780

? Gene models

Transcripts: 1  Exons: 7  Introns: 6 

Overlapping Features

? Genome features that overlap coordinates of this Gene

8 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ALKBH_ARATH function Putative dioxygenase that may repair alkylated DNA or RNA by oxidative demethylation. Requires molecular oxygen, alpha-ketoglutarate and iron (By similarity).

1 Proteins

Function

Gene Ontology

cellular component
cytoplasm  ? ECO  
nucleus  ? ECO  
molecular function
oxidative DNA demethylase activity  ? ECO  
ferrous iron binding  ? ECO  
oxidative RNA demethylase activity  ? ECO  
biological process
oxidative RNA demethylation  ? ECO  
oxidative single-stranded DNA demethylation  ? ECO  
DNA repair  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets