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Gene : RBP45B A. thaliana

DB identifier  ? AT1G11650 Secondary Identifier  ? locus:2027372
Brief Description  RNA-binding (RRM/RBD/RNP motifs) family protein
TAIR Computational Description  RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)
TAIR Curator Summary  Encodes an RNA binding protein with three RNA recognition motifs. The mRNA is cell-to-cell mobile.
TAIR Short Description  RNA-binding (RRM/RBD/RNP motifs) family protein
TAIR Aliases  ATRBP45B, RBP45B

1 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3470  
Location: Chr1:3914774-3918243

Gene models - RBP45B AT1G11650

? Gene models

Transcripts: 2  Exons: 12  Introns: 10 

Overlapping Features

? Genome features that overlap coordinates of this Gene

11 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RB45B_ARATH RB45B_ARATH-2 RB45B_ARATH-3 function Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.
RB45B_ARATH RB45B_ARATH-2 RB45B_ARATH-3 similarity Belongs to the polyadenylate-binding RBP45 family.
RB45B_ARATH RB45B_ARATH-2 RB45B_ARATH-3 tissue specificity Expressed in roots, leaves, stems, flowers, siliques, and seedlings. Present in immature anther tissues (tapetum cells) and mature pollen grains.

3 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
extracellular region  ? ECO  
molecular function
mRNA binding  ? ECO  
poly(A) binding  ? ECO  
RNA binding  ? ECO  
biological process
mRNA processing  ? ECO  
response to ozone  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets