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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G10740:CDS:9 | 205 | Chr1: 3568343-3568547 | Arabidopsis thaliana |
AT1G10740:CDS:7 | 132 | Chr1: 3568616-3568747 | Arabidopsis thaliana |
AT1G10740:CDS:6 | 438 | Chr1: 3568829-3569266 | Arabidopsis thaliana |
AT1G10740:CDS:5 | 104 | Chr1: 3569450-3569553 | Arabidopsis thaliana |
AT1G10740:CDS:4 | 101 | Chr1: 3569641-3569741 | Arabidopsis thaliana |
AT1G10740:CDS:3 | 104 | Chr1: 3569837-3569940 | Arabidopsis thaliana |
AT1G10740:CDS:2 | 95 | Chr1: 3570041-3570135 | Arabidopsis thaliana |
AT1G10740:CDS:1 | 243 | Chr1: 3570224-3570466 | Arabidopsis thaliana |
AT1G10740:CDS:9.1 | 205 | Chr1: 3568343-3568547 | Arabidopsis thaliana |
AT1G10740:CDS:7.1 | 132 | Chr1: 3568616-3568747 | Arabidopsis thaliana |
AT1G10740:CDS:6.1 | 438 | Chr1: 3568829-3569266 | Arabidopsis thaliana |
AT1G10740:CDS:5.1 | 104 | Chr1: 3569450-3569553 | Arabidopsis thaliana |
AT1G10740:CDS:4.1 | 101 | Chr1: 3569641-3569741 | Arabidopsis thaliana |
AT1G10740:CDS:3.1 | 104 | Chr1: 3569837-3569940 | Arabidopsis thaliana |
AT1G10740:CDS:2.1 | 95 | Chr1: 3570041-3570135 | Arabidopsis thaliana |
AT1G10740:CDS:1.1 | 243 | Chr1: 3570224-3570466 | Arabidopsis thaliana |
AT1G10740:CDS:9.2 | 205 | Chr1: 3568343-3568547 | Arabidopsis thaliana |
AT1G10740:CDS:7.2 | 132 | Chr1: 3568616-3568747 | Arabidopsis thaliana |
AT1G10740:CDS:6.2 | 438 | Chr1: 3568829-3569266 | Arabidopsis thaliana |
AT1G10740:CDS:5.2 | 104 | Chr1: 3569450-3569553 | Arabidopsis thaliana |
AT1G10740:CDS:4.2 | 101 | Chr1: 3569641-3569741 | Arabidopsis thaliana |
AT1G10740:CDS:3.2 | 104 | Chr1: 3569837-3569940 | Arabidopsis thaliana |
AT1G10740:CDS:2.2 | 95 | Chr1: 3570041-3570135 | Arabidopsis thaliana |
AT1G10740:CDS:1.2 | 243 | Chr1: 3570224-3570466 | Arabidopsis thaliana |
AT1G10740:CDS:8 | 136 | Chr1: 3568612-3568747 | Arabidopsis thaliana |
AT1G10740:CDS:6.3 | 438 | Chr1: 3568829-3569266 | Arabidopsis thaliana |
AT1G10740:CDS:5.3 | 104 | Chr1: 3569450-3569553 | Arabidopsis thaliana |
AT1G10740:CDS:4.3 | 101 | Chr1: 3569641-3569741 | Arabidopsis thaliana |
AT1G10740:CDS:3.3 | 104 | Chr1: 3569837-3569940 | Arabidopsis thaliana |
AT1G10740:CDS:2.3 | 95 | Chr1: 3570041-3570135 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G10730:exon:11 | 426 | Chr1: 3567681-3568106 | Arabidopsis thaliana |
AT1G10740:exon:10 | 224 | Chr1: 3568324-3568547 | Arabidopsis thaliana |
AT1G10740:exon:14 | 61 | Chr1: 3567905-3567965 | Arabidopsis thaliana |
AT1G10740:exon:11 | 232 | Chr1: 3568316-3568547 | Arabidopsis thaliana |
AT1G10740:exon:3 | 615 | Chr1: 3570224-3570838 | Arabidopsis thaliana |
AT1G10740:exon:13 | 436 | Chr1: 3568112-3568547 | Arabidopsis thaliana |
AT1G10740:exon:9 | 132 | Chr1: 3568616-3568747 | Arabidopsis thaliana |
AT1G10740:exon:1 | 830 | Chr1: 3570224-3571053 | Arabidopsis thaliana |
AT1G10740:exon:12 | 578 | Chr1: 3568170-3568747 | Arabidopsis thaliana |
AT1G10740:exon:8 | 438 | Chr1: 3568829-3569266 | Arabidopsis thaliana |
AT1G10740:exon:7 | 104 | Chr1: 3569450-3569553 | Arabidopsis thaliana |
AT1G10740:exon:6 | 101 | Chr1: 3569641-3569741 | Arabidopsis thaliana |
AT1G10740:exon:5 | 104 | Chr1: 3569837-3569940 | Arabidopsis thaliana |
AT1G10740:exon:4 | 95 | Chr1: 3570041-3570135 | Arabidopsis thaliana |
AT1G10740:exon:2 | 647 | Chr1: 3570224-3570870 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G10740:five_prime_UTR:3 | 372 | Chr1: 3570467-3570838 | Arabidopsis thaliana |
AT1G10740:five_prime_UTR:1 | 587 | Chr1: 3570467-3571053 | Arabidopsis thaliana |
AT1G10740:five_prime_UTR:2 | 404 | Chr1: 3570467-3570870 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G10730 | locus:2019913 | AT1G10730 | 2850 | Chr1: 3565257-3568106 | A. thaliana | Clathrin adaptor complexes medium subunit family protein;(source:Araport11) | Part of adaptor protein (AP) complex which mediadates clathrin-dependent trafficking at the trans-Golgi network (TGN) and the plasma membrane, respectively. Required for trafficking to plasma membrane and vacuoles. | Clathrin adaptor complexes medium subunit family protein | AP1M1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G10730.1 | 1820 | Chr1: 3565257-3568106 |
AT1G10740.4 | 1874 | Chr1: 3567905-3570838 |
AT1G10740.3 | 1882 | Chr1: 3567905-3570838 |
AT1G10740.1 | 2240 | Chr1: 3568112-3571053 |
AT1G10740.2 | 2067 | Chr1: 3568170-3570870 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G10730:three_prime_UTR:1 | 327 | Chr1: 3567780-3568106 | Arabidopsis thaliana |
AT1G10740:three_prime_UTR:1 | 19 | Chr1: 3568324-3568342 | Arabidopsis thaliana |
AT1G10740:three_prime_UTR:5 | 61 | Chr1: 3567905-3567965 | Arabidopsis thaliana |
AT1G10740:three_prime_UTR:2 | 27 | Chr1: 3568316-3568342 | Arabidopsis thaliana |
AT1G10740:three_prime_UTR:4 | 231 | Chr1: 3568112-3568342 | Arabidopsis thaliana |
AT1G10740:three_prime_UTR:3 | 442 | Chr1: 3568170-3568611 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
extracellular region | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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