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Gene : AT1G09890 A. thaliana

DB identifier  ? AT1G09890 Secondary Identifier  ? locus:2024427
Brief Description  Rhamnogalacturonate lyase family protein
TAIR Computational Description  Rhamnogalacturonate lyase family protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Rhamnogalacturonate lyase family protein

0 Gene Rifs

1 Organism

2 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3555  
Location: Chr1:3214049-3217603 reverse strand

Gene models - AT1G09890 AT1G09890

? Gene models

Transcripts: 5  Exons: 72  Introns: 67 

Overlapping Features

? Genome features that overlap coordinates of this Gene

27 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
F4I2M6_ARATH A0A1P8AQ50_ARATH A0A1P8AQ61_ARATH A0A1P8AQ77_ARATH A0A1P8AQ71_ARATH similarity Belongs to the polysaccharide lyase 4 family.

5 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
molecular function
rhamnogalacturonan endolyase activity  ? ECO  
carbohydrate binding  ? ECO  
biological process
carbohydrate metabolic process  ? ECO  
catabolic process  ? ECO  
cell wall organization  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets