External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G08220:CDS:8 | 118 | Chr1: 2581574-2581691 | Arabidopsis thaliana |
AT1G08220:CDS:7 | 176 | Chr1: 2581788-2581963 | Arabidopsis thaliana |
AT1G08220:CDS:6 | 72 | Chr1: 2582087-2582158 | Arabidopsis thaliana |
AT1G08220:CDS:5 | 189 | Chr1: 2582370-2582558 | Arabidopsis thaliana |
AT1G08220:CDS:3 | 64 | Chr1: 2582797-2582860 | Arabidopsis thaliana |
AT1G08220:CDS:2 | 41 | Chr1: 2582998-2583038 | Arabidopsis thaliana |
AT1G08220:CDS:1 | 165 | Chr1: 2583124-2583288 | Arabidopsis thaliana |
AT1G08220:CDS:8.1 | 118 | Chr1: 2581574-2581691 | Arabidopsis thaliana |
AT1G08220:CDS:7.1 | 176 | Chr1: 2581788-2581963 | Arabidopsis thaliana |
AT1G08220:CDS:6.1 | 72 | Chr1: 2582087-2582158 | Arabidopsis thaliana |
AT1G08220:CDS:5.1 | 189 | Chr1: 2582370-2582558 | Arabidopsis thaliana |
AT1G08220:CDS:4 | 54 | Chr1: 2582797-2582850 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G08220:exon:11 | 302 | Chr1: 2581022-2581323 | Arabidopsis thaliana |
AT1G08220:exon:9 | 121 | Chr1: 2581571-2581691 | Arabidopsis thaliana |
AT1G08220:exon:5 | 64 | Chr1: 2582797-2582860 | Arabidopsis thaliana |
AT1G08220:exon:1 | 267 | Chr1: 2583124-2583390 | Arabidopsis thaliana |
AT1G08220:exon:10 | 389 | Chr1: 2581303-2581691 | Arabidopsis thaliana |
AT1G08220:exon:8 | 176 | Chr1: 2581788-2581963 | Arabidopsis thaliana |
AT1G08220:exon:7 | 72 | Chr1: 2582087-2582158 | Arabidopsis thaliana |
AT1G08220:exon:6 | 189 | Chr1: 2582370-2582558 | Arabidopsis thaliana |
AT1G08220:exon:4 | 69 | Chr1: 2582797-2582865 | Arabidopsis thaliana |
AT1G08220:exon:3 | 41 | Chr1: 2582998-2583038 | Arabidopsis thaliana |
AT1G08220:exon:2 | 198 | Chr1: 2583124-2583321 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G08220:five_prime_UTR:1 | 102 | Chr1: 2583289-2583390 | Arabidopsis thaliana |
AT1G08220:five_prime_UTR:4 | 15 | Chr1: 2582851-2582865 | Arabidopsis thaliana |
AT1G08220:five_prime_UTR:3 | 41 | Chr1: 2582998-2583038 | Arabidopsis thaliana |
AT1G08220:five_prime_UTR:2 | 198 | Chr1: 2583124-2583321 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G08220.1 | 1232 | Chr1: 2581022-2583390 |
AT1G08220.2 | 1134 | Chr1: 2581303-2583321 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G08220:three_prime_UTR:3 | 302 | Chr1: 2581022-2581323 | Arabidopsis thaliana |
AT1G08220:three_prime_UTR:1 | 3 | Chr1: 2581571-2581573 | Arabidopsis thaliana |
AT1G08220:three_prime_UTR:2 | 271 | Chr1: 2581303-2581573 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...