External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G06720:CDS:21 | 162 | Chr1: 2060615-2060776 | Arabidopsis thaliana |
AT1G06720:CDS:20 | 204 | Chr1: 2060872-2061075 | Arabidopsis thaliana |
AT1G06720:CDS:19 | 249 | Chr1: 2061197-2061445 | Arabidopsis thaliana |
AT1G06720:CDS:18 | 210 | Chr1: 2061528-2061737 | Arabidopsis thaliana |
AT1G06720:CDS:16 | 240 | Chr1: 2062196-2062435 | Arabidopsis thaliana |
AT1G06720:CDS:15 | 219 | Chr1: 2062603-2062821 | Arabidopsis thaliana |
AT1G06720:CDS:14 | 53 | Chr1: 2062892-2062944 | Arabidopsis thaliana |
AT1G06720:CDS:11 | 307 | Chr1: 2063365-2063671 | Arabidopsis thaliana |
AT1G06720:CDS:10 | 197 | Chr1: 2063760-2063956 | Arabidopsis thaliana |
AT1G06720:CDS:9 | 181 | Chr1: 2064119-2064299 | Arabidopsis thaliana |
AT1G06720:CDS:8 | 290 | Chr1: 2064636-2064925 | Arabidopsis thaliana |
AT1G06720:CDS:7 | 241 | Chr1: 2065132-2065372 | Arabidopsis thaliana |
AT1G06720:CDS:6 | 211 | Chr1: 2065833-2066043 | Arabidopsis thaliana |
AT1G06720:CDS:5 | 191 | Chr1: 2066132-2066322 | Arabidopsis thaliana |
AT1G06720:CDS:4 | 119 | Chr1: 2066496-2066614 | Arabidopsis thaliana |
AT1G06720:CDS:3 | 91 | Chr1: 2066733-2066823 | Arabidopsis thaliana |
AT1G06720:CDS:2 | 147 | Chr1: 2066902-2067048 | Arabidopsis thaliana |
AT1G06720:CDS:1 | 132 | Chr1: 2067150-2067281 | Arabidopsis thaliana |
AT1G06720:CDS:21.1 | 162 | Chr1: 2060615-2060776 | Arabidopsis thaliana |
AT1G06720:CDS:20.1 | 204 | Chr1: 2060872-2061075 | Arabidopsis thaliana |
AT1G06720:CDS:19.1 | 249 | Chr1: 2061197-2061445 | Arabidopsis thaliana |
AT1G06720:CDS:18.1 | 210 | Chr1: 2061528-2061737 | Arabidopsis thaliana |
AT1G06720:CDS:16.1 | 240 | Chr1: 2062196-2062435 | Arabidopsis thaliana |
AT1G06720:CDS:15.1 | 219 | Chr1: 2062603-2062821 | Arabidopsis thaliana |
AT1G06720:CDS:13 | 94 | Chr1: 2062892-2062985 | Arabidopsis thaliana |
AT1G06720:CDS:12 | 350 | Chr1: 2063322-2063671 | Arabidopsis thaliana |
AT1G06720:CDS:10.1 | 197 | Chr1: 2063760-2063956 | Arabidopsis thaliana |
AT1G06720:CDS:9.1 | 181 | Chr1: 2064119-2064299 | Arabidopsis thaliana |
AT1G06720:CDS:8.1 | 290 | Chr1: 2064636-2064925 | Arabidopsis thaliana |
AT1G06720:CDS:7.1 | 241 | Chr1: 2065132-2065372 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G06720:exon:16 | 53 | Chr1: 2062892-2062944 | Arabidopsis thaliana |
AT1G06720:exon:13 | 307 | Chr1: 2063365-2063671 | Arabidopsis thaliana |
AT1G06720:exon:3 | 174 | Chr1: 2067150-2067323 | Arabidopsis thaliana |
AT1G06720:exon:23 | 333 | Chr1: 2060444-2060776 | Arabidopsis thaliana |
AT1G06720:exon:22 | 204 | Chr1: 2060872-2061075 | Arabidopsis thaliana |
AT1G06720:exon:21 | 249 | Chr1: 2061197-2061445 | Arabidopsis thaliana |
AT1G06720:exon:20 | 210 | Chr1: 2061528-2061737 | Arabidopsis thaliana |
AT1G06720:exon:1 | 334 | Chr1: 2067150-2067483 | Arabidopsis thaliana |
AT1G06720:exon:19 | 167 | Chr1: 2061766-2061932 | Arabidopsis thaliana |
AT1G06720:exon:18 | 240 | Chr1: 2062196-2062435 | Arabidopsis thaliana |
AT1G06720:exon:17 | 219 | Chr1: 2062603-2062821 | Arabidopsis thaliana |
AT1G06720:exon:15 | 94 | Chr1: 2062892-2062985 | Arabidopsis thaliana |
AT1G06720:exon:14 | 350 | Chr1: 2063322-2063671 | Arabidopsis thaliana |
AT1G06720:exon:12 | 197 | Chr1: 2063760-2063956 | Arabidopsis thaliana |
AT1G06720:exon:11 | 181 | Chr1: 2064119-2064299 | Arabidopsis thaliana |
AT1G06720:exon:10 | 290 | Chr1: 2064636-2064925 | Arabidopsis thaliana |
AT1G06720:exon:9 | 241 | Chr1: 2065132-2065372 | Arabidopsis thaliana |
AT1G06720:exon:8 | 211 | Chr1: 2065833-2066043 | Arabidopsis thaliana |
AT1G06720:exon:7 | 191 | Chr1: 2066132-2066322 | Arabidopsis thaliana |
AT1G06720:exon:6 | 119 | Chr1: 2066496-2066614 | Arabidopsis thaliana |
AT1G06720:exon:5 | 91 | Chr1: 2066733-2066823 | Arabidopsis thaliana |
AT1G06720:exon:4 | 147 | Chr1: 2066902-2067048 | Arabidopsis thaliana |
AT1G06720:exon:2 | 224 | Chr1: 2067150-2067373 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G06720:five_prime_UTR:3 | 42 | Chr1: 2067282-2067323 | Arabidopsis thaliana |
AT1G06720:five_prime_UTR:1 | 202 | Chr1: 2067282-2067483 | Arabidopsis thaliana |
AT1G06720:five_prime_UTR:2 | 92 | Chr1: 2067282-2067373 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G06720.1 | 3657 | Chr1: 2060444-2067323 |
AT1G06720.2 | 3901 | Chr1: 2060444-2067483 |
AT1G06720.3 | 2962 | Chr1: 2061766-2067373 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G06720:three_prime_UTR:2 | 171 | Chr1: 2060444-2060614 | Arabidopsis thaliana |
AT1G06720:three_prime_UTR:1 | 71 | Chr1: 2061766-2061836 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nucleolus | ECO |
90S preribosome | ECO |
molecular function | |
U3 snoRNA binding | ECO |
GTPase activity | ECO |
GTP binding | ECO |
biological process | |
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | ECO |
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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