External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G06710:CDS:3 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.1 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.1 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.2 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.2 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.3 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.3 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.4 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.4 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.5 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.5 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.6 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.6 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.7 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.7 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.8 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.8 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:2 | 2964 | Chr1: 2057279-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.9 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.9 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:2.1 | 2964 | Chr1: 2057279-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:2.2 | 2964 | Chr1: 2057279-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:2.3 | 2964 | Chr1: 2057279-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:2.4 | 2964 | Chr1: 2057279-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:2.5 | 2964 | Chr1: 2057279-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:2.6 | 2964 | Chr1: 2057279-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.10 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
AT1G06710:CDS:1.10 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G06710:CDS:3.11 | 45 | Chr1: 2056999-2057043 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G06710:exon:24 | 314 | Chr1: 2055745-2056058 | Arabidopsis thaliana |
AT1G06710:exon:14 | 810 | Chr1: 2056234-2057043 | Arabidopsis thaliana |
AT1G06710:exon:23 | 404 | Chr1: 2055745-2056148 | Arabidopsis thaliana |
AT1G06710:exon:11 | 411 | Chr1: 2056633-2057043 | Arabidopsis thaliana |
AT1G06710:exon:1 | 3136 | Chr1: 2057294-2060429 | Arabidopsis thaliana |
AT1G06710:exon:9 | 393 | Chr1: 2056651-2057043 | Arabidopsis thaliana |
AT1G06710:exon:22 | 303 | Chr1: 2055756-2056058 | Arabidopsis thaliana |
AT1G06710:exon:2 | 3056 | Chr1: 2057294-2060349 | Arabidopsis thaliana |
AT1G06710:exon:21 | 393 | Chr1: 2055756-2056148 | Arabidopsis thaliana |
AT1G06710:exon:15 | 538 | Chr1: 2056234-2056771 | Arabidopsis thaliana |
AT1G06710:exon:5 | 3498 | Chr1: 2056852-2060349 | Arabidopsis thaliana |
AT1G06710:exon:10 | 3706 | Chr1: 2056633-2060338 | Arabidopsis thaliana |
AT1G06710:exon:8 | 3688 | Chr1: 2056651-2060338 | Arabidopsis thaliana |
AT1G06710:exon:19 | 379 | Chr1: 2055770-2056148 | Arabidopsis thaliana |
AT1G06710:exon:17 | 96 | Chr1: 2056234-2056329 | Arabidopsis thaliana |
AT1G06710:exon:6 | 3487 | Chr1: 2056852-2060338 | Arabidopsis thaliana |
AT1G06710:exon:20 | 289 | Chr1: 2055770-2056058 | Arabidopsis thaliana |
AT1G06710:exon:13 | 4105 | Chr1: 2056234-2060338 | Arabidopsis thaliana |
AT1G06710:exon:18 | 270 | Chr1: 2055789-2056058 | Arabidopsis thaliana |
AT1G06710:exon:16 | 486 | Chr1: 2056234-2056719 | Arabidopsis thaliana |
AT1G06710:exon:7 | 192 | Chr1: 2056852-2057043 | Arabidopsis thaliana |
AT1G06710:exon:3 | 3044 | Chr1: 2057294-2060337 | Arabidopsis thaliana |
AT1G06710:exon:12 | 469 | Chr1: 2056575-2057043 | Arabidopsis thaliana |
AT1G06710:exon:4 | 2949 | Chr1: 2057294-2060242 | Arabidopsis thaliana |
AT1G04493:exon:1 | 314 | Chr1: 2055991-2056304 | Arabidopsis thaliana |
AT1G04497:exon:1 | 308 | Chr1: 2056863-2057170 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G06710:five_prime_UTR:1 | 187 | Chr1: 2060243-2060429 | Arabidopsis thaliana |
AT1G06710:five_prime_UTR:2 | 107 | Chr1: 2060243-2060349 | Arabidopsis thaliana |
AT1G06710:five_prime_UTR:3 | 96 | Chr1: 2060243-2060338 | Arabidopsis thaliana |
AT1G06710:five_prime_UTR:4 | 95 | Chr1: 2060243-2060337 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G04493 | AT1G04493 | 314 | Chr1: 2055991-2056304 | A. thaliana | None;(source:Araport11) | NULL | ||||
AT1G04497 | AT1G04497 | 308 | Chr1: 2056863-2057170 | A. thaliana | None;(source:Araport11) | NULL |
Lnc RNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G04493.1 | 314 | Chr1: 2055991-2056304 |
AT1G04497.1 | 308 | Chr1: 2056863-2057170 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G06710.6 | 4180 | Chr1: 2055745-2060429 |
AT1G06710.5 | 4218 | Chr1: 2055745-2060429 |
AT1G06710.2 | 4350 | Chr1: 2055745-2060429 |
AT1G06710.8 | 3957 | Chr1: 2055745-2060429 |
AT1G06710.3 | 4270 | Chr1: 2055745-2060429 |
AT1G06710.4 | 4260 | Chr1: 2055745-2060429 |
AT1G06710.9 | 3828 | Chr1: 2055745-2060429 |
AT1G06710.7 | 4047 | Chr1: 2055745-2060429 |
AT1G06710.12 | 3938 | Chr1: 2055756-2060349 |
AT1G06710.11 | 4339 | Chr1: 2055756-2060349 |
AT1G06710.13 | 3647 | Chr1: 2055756-2060349 |
AT1G06710.10 | 4429 | Chr1: 2055756-2060349 |
AT1G06710.16 | 4181 | Chr1: 2055770-2060338 |
AT1G06710.14 | 4484 | Chr1: 2055770-2060338 |
AT1G06710.17 | 4163 | Chr1: 2055770-2060338 |
AT1G06710.18 | 3962 | Chr1: 2055770-2060338 |
AT1G06710.15 | 4394 | Chr1: 2055770-2060338 |
AT1G06710.19 | 3992 | Chr1: 2055789-2060337 |
AT1G06710.1 | 3418 | Chr1: 2056575-2060242 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G06710:three_prime_UTR:19 | 314 | Chr1: 2055745-2056058 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:9 | 765 | Chr1: 2056234-2056998 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:18 | 404 | Chr1: 2055745-2056148 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:6 | 366 | Chr1: 2056633-2056998 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:4 | 348 | Chr1: 2056651-2056998 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:17 | 303 | Chr1: 2055756-2056058 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:16 | 393 | Chr1: 2055756-2056148 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:10 | 538 | Chr1: 2056234-2056771 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:5 | 646 | Chr1: 2056633-2057278 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:3 | 628 | Chr1: 2056651-2057278 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:14 | 379 | Chr1: 2055770-2056148 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:12 | 96 | Chr1: 2056234-2056329 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:1 | 427 | Chr1: 2056852-2057278 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:15 | 289 | Chr1: 2055770-2056058 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:8 | 1045 | Chr1: 2056234-2057278 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:13 | 270 | Chr1: 2055789-2056058 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:11 | 486 | Chr1: 2056234-2056719 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:2 | 147 | Chr1: 2056852-2056998 | Arabidopsis thaliana |
AT1G06710:three_prime_UTR:7 | 424 | Chr1: 2056575-2056998 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8AQ62_ARATH PPR18_ARATH | similarity | Belongs to the PPR family. P subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
mitochondrion | ECO |
molecular function | |
mRNA binding | ECO |
biological process | |
mitochondrion organization | ECO |
RNA processing | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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