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Gene : RHON1 A. thaliana

DB identifier  ? AT1G06190 Secondary Identifier  ? locus:2038560
Name  ? Rho-N 1 Brief Description  Rho termination factor
TAIR Computational Description  Rho termination factor;(source:Araport11)
TAIR Curator Summary  Encodes a novel ribonucleic acid-binding protein that interacts with the endonuclease RNase E and supports its function in processing plastid ribonucleic acids.
TAIR Short Description  Rho termination factor
TAIR Aliases  RHON1

3 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1964  
Location: Chr1:1892231-1894194 reverse strand

Gene models - RHON1 AT1G06190

? Gene models

Transcripts: 5  Exons: 11  Introns: 6 

Overlapping Features

? Genome features that overlap coordinates of this Gene

15 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RHON1_ARATH RHON1_ARATH-2 function Binds to and supports processing of specific plastid RNAs. Associates via its C-terminal Rho-N domain to single stranded regions of 16S and 23S rRNAs or to rbcL mRNAs. May be involved in targeting transcripts to RNases such as RNE or RNase J.

4 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
chloroplast  ? ECO  
molecular function
rRNA binding  ? ECO  
mRNA binding  ? ECO  
biological process
chloroplast mRNA processing  ? ECO  
DNA-templated transcription termination  ? ECO  
chloroplast rRNA processing  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets