help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect

Gene : ORA59 A. thaliana

DB identifier  ? AT1G06160 Secondary Identifier  ? locus:2038500
Name  ? octadecanoid-responsive Arabidopsis AP2/ERF 59 Brief Description  octadecanoid-responsive AP2/ERF 59
TAIR Computational Description  octadecanoid-responsive AP2/ERF 59;(source:Araport11)
TAIR Curator Summary  encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
TAIR Short Description  octadecanoid-responsive Arabidopsis AP2/ERF 59
TAIR Aliases  ERF59, ORA59

9 Gene Rifs

1 Organism

34 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1086  
Location: Chr1:1882907-1883992

Gene models - ORA59 AT1G06160

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features Displayer

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ERF94_ARATH function Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Acts as an essential integrator of the JA and ethylene signal transduction pathways. Activates the expression of the PDF1.2A gene.
ERF94_ARATH similarity Belongs to the AP2/ERF transcription factor family. ERF subfamily.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
DNA binding  ? ECO  
biological process
jasmonic acid and ethylene-dependent systemic resistance  ? ECO  
ethylene-activated signaling pathway  ? ECO  
response to ethylene  ? ECO  
response to jasmonic acid  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets