External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G05120:CDS:17 | 73 | Chr1: 1471624-1471696 | Arabidopsis thaliana |
AT1G05120:CDS:16 | 81 | Chr1: 1471780-1471860 | Arabidopsis thaliana |
AT1G05120:CDS:15 | 89 | Chr1: 1471948-1472036 | Arabidopsis thaliana |
AT1G05120:CDS:14 | 153 | Chr1: 1472130-1472282 | Arabidopsis thaliana |
AT1G05120:CDS:13 | 105 | Chr1: 1472373-1472477 | Arabidopsis thaliana |
AT1G05120:CDS:12 | 231 | Chr1: 1472603-1472833 | Arabidopsis thaliana |
AT1G05120:CDS:11 | 123 | Chr1: 1473009-1473131 | Arabidopsis thaliana |
AT1G05120:CDS:10 | 70 | Chr1: 1473238-1473307 | Arabidopsis thaliana |
AT1G05120:CDS:9 | 86 | Chr1: 1473394-1473479 | Arabidopsis thaliana |
AT1G05120:CDS:8 | 147 | Chr1: 1473671-1473817 | Arabidopsis thaliana |
AT1G05120:CDS:7 | 64 | Chr1: 1473921-1473984 | Arabidopsis thaliana |
AT1G05120:CDS:6 | 74 | Chr1: 1474095-1474168 | Arabidopsis thaliana |
AT1G05120:CDS:5 | 123 | Chr1: 1474253-1474375 | Arabidopsis thaliana |
AT1G05120:CDS:4 | 944 | Chr1: 1474596-1475539 | Arabidopsis thaliana |
AT1G05120:CDS:3 | 93 | Chr1: 1475631-1475723 | Arabidopsis thaliana |
AT1G05120:CDS:2 | 46 | Chr1: 1476022-1476067 | Arabidopsis thaliana |
AT1G05120:CDS:17.1 | 73 | Chr1: 1471624-1471696 | Arabidopsis thaliana |
AT1G05120:CDS:16.1 | 81 | Chr1: 1471780-1471860 | Arabidopsis thaliana |
AT1G05120:CDS:15.1 | 89 | Chr1: 1471948-1472036 | Arabidopsis thaliana |
AT1G05120:CDS:14.1 | 153 | Chr1: 1472130-1472282 | Arabidopsis thaliana |
AT1G05120:CDS:13.1 | 105 | Chr1: 1472373-1472477 | Arabidopsis thaliana |
AT1G05120:CDS:12.1 | 231 | Chr1: 1472603-1472833 | Arabidopsis thaliana |
AT1G05120:CDS:11.1 | 123 | Chr1: 1473009-1473131 | Arabidopsis thaliana |
AT1G05120:CDS:10.1 | 70 | Chr1: 1473238-1473307 | Arabidopsis thaliana |
AT1G05120:CDS:9.1 | 86 | Chr1: 1473394-1473479 | Arabidopsis thaliana |
AT1G05120:CDS:8.1 | 147 | Chr1: 1473671-1473817 | Arabidopsis thaliana |
AT1G05120:CDS:7.1 | 64 | Chr1: 1473921-1473984 | Arabidopsis thaliana |
AT1G05120:CDS:6.1 | 74 | Chr1: 1474095-1474168 | Arabidopsis thaliana |
AT1G05120:CDS:5.1 | 123 | Chr1: 1474253-1474375 | Arabidopsis thaliana |
AT1G05120:CDS:4.1 | 944 | Chr1: 1474596-1475539 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G05120:exon:18 | 374 | Chr1: 1471323-1471696 | Arabidopsis thaliana |
AT1G05120:exon:2 | 129 | Chr1: 1476022-1476150 | Arabidopsis thaliana |
AT1G05120:exon:17 | 338 | Chr1: 1471359-1471696 | Arabidopsis thaliana |
AT1G05120:exon:16 | 81 | Chr1: 1471780-1471860 | Arabidopsis thaliana |
AT1G05120:exon:15 | 89 | Chr1: 1471948-1472036 | Arabidopsis thaliana |
AT1G05120:exon:14 | 153 | Chr1: 1472130-1472282 | Arabidopsis thaliana |
AT1G05120:exon:13 | 105 | Chr1: 1472373-1472477 | Arabidopsis thaliana |
AT1G05120:exon:12 | 231 | Chr1: 1472603-1472833 | Arabidopsis thaliana |
AT1G05120:exon:11 | 123 | Chr1: 1473009-1473131 | Arabidopsis thaliana |
AT1G05120:exon:10 | 70 | Chr1: 1473238-1473307 | Arabidopsis thaliana |
AT1G05120:exon:9 | 86 | Chr1: 1473394-1473479 | Arabidopsis thaliana |
AT1G05120:exon:8 | 147 | Chr1: 1473671-1473817 | Arabidopsis thaliana |
AT1G05120:exon:7 | 64 | Chr1: 1473921-1473984 | Arabidopsis thaliana |
AT1G05120:exon:6 | 74 | Chr1: 1474095-1474168 | Arabidopsis thaliana |
AT1G05120:exon:5 | 123 | Chr1: 1474253-1474375 | Arabidopsis thaliana |
AT1G05120:exon:4 | 944 | Chr1: 1474596-1475539 | Arabidopsis thaliana |
AT1G05120:exon:3 | 93 | Chr1: 1475631-1475723 | Arabidopsis thaliana |
AT1G05120:exon:1 | 268 | Chr1: 1476022-1476289 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G05120:five_prime_UTR:2 | 83 | Chr1: 1476068-1476150 | Arabidopsis thaliana |
AT1G05120:five_prime_UTR:1 | 93 | Chr1: 1476197-1476289 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G05120.1 | 2886 | Chr1: 1471323-1476150 |
AT1G05120.2 | 2989 | Chr1: 1471359-1476289 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G05120:three_prime_UTR:2 | 301 | Chr1: 1471323-1471623 | Arabidopsis thaliana |
AT1G05120:three_prime_UTR:1 | 265 | Chr1: 1471359-1471623 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A178W5J4_ARATH A0A1P8AWF9_ARATH | similarity | Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
ATP binding | ECO |
ATP-dependent chromatin remodeler activity | ECO |
helicase activity | ECO |
hydrolase activity | ECO |
metal ion binding | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...