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Gene : Tic20-I A. thaliana

DB identifier  ? AT1G04940 Secondary Identifier  ? locus:2010617
Name  ? translocon at the inner envelope membrane of chloroplasts 20-I Brief Description  translocon at the inner envelope membrane of chloroplasts 20
TAIR Computational Description  translocon at the inner envelope membrane of chloroplasts 20;(source:Araport11)
TAIR Curator Summary  Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).
TAIR Short Description  translocon at the inner envelope membrane of chloroplasts 20
TAIR Aliases  atTIC20, AtTic20-I, TIC20, Tic20-I

5 Gene Rifs

1 Organism

22 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1649  
Location: Chr1:1399182-1400830

Gene models - Tic20-I AT1G04940

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TI201_ARATH developmental stage Highly expressed during germination and early development, with levels peaking at 25 days.
TI201_ARATH function Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope. Seems to be specific for photosynthesis-related pre-proteins. Partially redundant with TIC20-IV, but not with TIC20-II or TIC20-V.
TI201_ARATH similarity Belongs to the Tic20 family.
TI201_ARATH tissue specificity Expressed in leaves, shoots and roots. High expression in mature photosynthetic tissues. Lower levels in non-photosynthetic tissues and roots.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast inner membrane  ? ECO  
molecular function
protein transmembrane transporter activity  ? ECO  
biological process
protein import into chloroplast stroma  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets