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Gene : AT1G03400 A. thaliana

DB identifier  ? AT1G03400 Secondary Identifier  ? locus:2020818
Brief Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR Computational Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)
TAIR Curator Summary  A single copy gene that encodes a protein with sequence similarity to tomato E8 (ACC oxidase, the last step in ethylene biosynthesis) involved in ethylene synthesis and fruit ripening in tomato. This gene is not induced by ethylene in siliques. The transcript is found in siliques, etiolated seedlings, leaves, stems and flowers.
TAIR Short Description  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1593  
Location: Chr1:842659-844251 reverse strand

Gene models - AT1G03400 AT1G03400

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ACCH4_ARATH A0A1P8AQW5_ARATH similarity Belongs to the iron/ascorbate-dependent oxidoreductase family.

2 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
dioxygenase activity  ? ECO  
1-aminocyclopropane-1-carboxylate oxidase activity  ? ECO  
metal ion binding  ? ECO  
biological process
secondary metabolite biosynthetic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets