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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G03290:CDS:1 | 48 | Chr1: 807970-808017 | Arabidopsis thaliana |
AT1G03290:CDS:2 | 166 | Chr1: 808229-808394 | Arabidopsis thaliana |
AT1G03290:CDS:4 | 683 | Chr1: 808532-809214 | Arabidopsis thaliana |
AT1G03290:CDS:7 | 174 | Chr1: 809409-809582 | Arabidopsis thaliana |
AT1G03290:CDS:8 | 117 | Chr1: 809672-809788 | Arabidopsis thaliana |
AT1G03290:CDS:9 | 180 | Chr1: 809911-810090 | Arabidopsis thaliana |
AT1G03290:CDS:10 | 47 | Chr1: 810188-810234 | Arabidopsis thaliana |
AT1G03290:CDS:11 | 301 | Chr1: 810380-810680 | Arabidopsis thaliana |
AT1G03290:CDS:1.1 | 48 | Chr1: 807970-808017 | Arabidopsis thaliana |
AT1G03290:CDS:2.1 | 166 | Chr1: 808229-808394 | Arabidopsis thaliana |
AT1G03290:CDS:4.1 | 683 | Chr1: 808532-809214 | Arabidopsis thaliana |
AT1G03290:CDS:7.1 | 174 | Chr1: 809409-809582 | Arabidopsis thaliana |
AT1G03290:CDS:8.1 | 117 | Chr1: 809672-809788 | Arabidopsis thaliana |
AT1G03290:CDS:9.1 | 180 | Chr1: 809911-810090 | Arabidopsis thaliana |
AT1G03290:CDS:10.1 | 47 | Chr1: 810188-810234 | Arabidopsis thaliana |
AT1G03290:CDS:11.1 | 301 | Chr1: 810380-810680 | Arabidopsis thaliana |
AT1G03290:CDS:1.2 | 48 | Chr1: 807970-808017 | Arabidopsis thaliana |
AT1G03290:CDS:2.2 | 166 | Chr1: 808229-808394 | Arabidopsis thaliana |
AT1G03290:CDS:4.2 | 683 | Chr1: 808532-809214 | Arabidopsis thaliana |
AT1G03290:CDS:7.2 | 174 | Chr1: 809409-809582 | Arabidopsis thaliana |
AT1G03290:CDS:8.2 | 117 | Chr1: 809672-809788 | Arabidopsis thaliana |
AT1G03290:CDS:9.2 | 180 | Chr1: 809911-810090 | Arabidopsis thaliana |
AT1G03290:CDS:10.2 | 47 | Chr1: 810188-810234 | Arabidopsis thaliana |
AT1G03290:CDS:11.2 | 301 | Chr1: 810380-810680 | Arabidopsis thaliana |
AT1G03290:CDS:1.3 | 48 | Chr1: 807970-808017 | Arabidopsis thaliana |
AT1G03290:CDS:2.3 | 166 | Chr1: 808229-808394 | Arabidopsis thaliana |
AT1G03290:CDS:3 | 291 | Chr1: 808532-808822 | Arabidopsis thaliana |
AT1G03290:CDS:5 | 302 | Chr1: 808913-809214 | Arabidopsis thaliana |
AT1G03290:CDS:7.3 | 174 | Chr1: 809409-809582 | Arabidopsis thaliana |
AT1G03290:CDS:8.3 | 117 | Chr1: 809672-809788 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G03290:exon:1 | 271 | Chr1: 807361-807631 | Arabidopsis thaliana |
AT1G03290:exon:2 | 642 | Chr1: 807376-808017 | Arabidopsis thaliana |
AT1G03290:exon:18 | 494 | Chr1: 810380-810873 | Arabidopsis thaliana |
AT1G03290:exon:3 | 132 | Chr1: 807379-807510 | Arabidopsis thaliana |
AT1G03290:exon:6 | 40 | Chr1: 807592-807631 | Arabidopsis thaliana |
AT1G03290:exon:11 | 302 | Chr1: 808913-809214 | Arabidopsis thaliana |
AT1G03290:exon:5 | 236 | Chr1: 807396-807631 | Arabidopsis thaliana |
AT1G03290:exon:9 | 291 | Chr1: 808532-808822 | Arabidopsis thaliana |
AT1G03290:exon:12 | 236 | Chr1: 808979-809214 | Arabidopsis thaliana |
AT1G03290:exon:17 | 478 | Chr1: 810380-810857 | Arabidopsis thaliana |
AT1G03290:exon:4 | 115 | Chr1: 807396-807510 | Arabidopsis thaliana |
AT1G03290:exon:7 | 67 | Chr1: 807951-808017 | Arabidopsis thaliana |
AT1G03290:exon:8 | 166 | Chr1: 808229-808394 | Arabidopsis thaliana |
AT1G03290:exon:10 | 683 | Chr1: 808532-809214 | Arabidopsis thaliana |
AT1G03290:exon:13 | 174 | Chr1: 809409-809582 | Arabidopsis thaliana |
AT1G03290:exon:14 | 117 | Chr1: 809672-809788 | Arabidopsis thaliana |
AT1G03290:exon:15 | 180 | Chr1: 809911-810090 | Arabidopsis thaliana |
AT1G03290:exon:16 | 47 | Chr1: 810188-810234 | Arabidopsis thaliana |
AT1G03290:exon:19 | 2837 | Chr1: 810380-813216 | Arabidopsis thaliana |
AT1G03300:exon:2 | 956 | Chr1: 811033-811988 | Arabidopsis thaliana |
AT1G03300:exon:1 | 1057 | Chr1: 812030-813086 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G03290:five_prime_UTR:1 | 271 | Chr1: 807361-807631 | Arabidopsis thaliana |
AT1G03290:five_prime_UTR:2 | 594 | Chr1: 807376-807969 | Arabidopsis thaliana |
AT1G03290:five_prime_UTR:3 | 132 | Chr1: 807379-807510 | Arabidopsis thaliana |
AT1G03290:five_prime_UTR:6 | 40 | Chr1: 807592-807631 | Arabidopsis thaliana |
AT1G03290:five_prime_UTR:5 | 236 | Chr1: 807396-807631 | Arabidopsis thaliana |
AT1G03290:five_prime_UTR:4 | 115 | Chr1: 807396-807510 | Arabidopsis thaliana |
AT1G03290:five_prime_UTR:7 | 19 | Chr1: 807951-807969 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G03300 | locus:2014505 | ATDUF1 | DOMAIN OF UNKNOWN FUNCTION 724 1 | 2054 | Chr1: 811033-813086 | A. thaliana | agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 1);(source:Araport11) | Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype | DOMAIN OF UNKNOWN FUNCTION 724 1 | ATDUF1, DUF1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G03290.2 | 4542 | Chr1: 807361-813216 |
AT1G03290.3 | 2503 | Chr1: 807376-810873 |
AT1G03290.4 | 4443 | Chr1: 807379-813216 |
AT1G03290.5 | 2058 | Chr1: 807396-810857 |
AT1G03290.6 | 1992 | Chr1: 807396-810857 |
AT1G03290.1 | 4386 | Chr1: 807396-813216 |
AT1G03300.1 | 2013 | Chr1: 811033-813086 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G03290:three_prime_UTR:2 | 193 | Chr1: 810681-810873 | Arabidopsis thaliana |
AT1G03290:three_prime_UTR:1 | 177 | Chr1: 810681-810857 | Arabidopsis thaliana |
AT1G03290:three_prime_UTR:3 | 2536 | Chr1: 810681-813216 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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