External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 74, Exons: 19, Five Prime UTR: 1, mRNAs: 6, Three Prime UTRs: 6, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G02960:CDS:18 | 67 | Chr1: 667002-667068 | Arabidopsis thaliana |
AT1G02960:CDS:17 | 131 | Chr1: 667151-667281 | Arabidopsis thaliana |
AT1G02960:CDS:14 | 65 | Chr1: 667373-667437 | Arabidopsis thaliana |
AT1G02960:CDS:11 | 101 | Chr1: 667541-667641 | Arabidopsis thaliana |
AT1G02960:CDS:10 | 134 | Chr1: 667735-667868 | Arabidopsis thaliana |
AT1G02960:CDS:9 | 126 | Chr1: 667957-668082 | Arabidopsis thaliana |
AT1G02960:CDS:8 | 296 | Chr1: 668173-668468 | Arabidopsis thaliana |
AT1G02960:CDS:7 | 133 | Chr1: 668613-668745 | Arabidopsis thaliana |
AT1G02960:CDS:6 | 132 | Chr1: 668856-668987 | Arabidopsis thaliana |
AT1G02960:CDS:5 | 56 | Chr1: 669079-669134 | Arabidopsis thaliana |
AT1G02960:CDS:4 | 40 | Chr1: 669227-669266 | Arabidopsis thaliana |
AT1G02960:CDS:3 | 53 | Chr1: 669461-669513 | Arabidopsis thaliana |
AT1G02960:CDS:2 | 31 | Chr1: 669620-669650 | Arabidopsis thaliana |
AT1G02960:CDS:1 | 24 | Chr1: 669750-669773 | Arabidopsis thaliana |
AT1G02960:CDS:12 | 139 | Chr1: 667503-667641 | Arabidopsis thaliana |
AT1G02960:CDS:10.1 | 134 | Chr1: 667735-667868 | Arabidopsis thaliana |
AT1G02960:CDS:9.1 | 126 | Chr1: 667957-668082 | Arabidopsis thaliana |
AT1G02960:CDS:8.1 | 296 | Chr1: 668173-668468 | Arabidopsis thaliana |
AT1G02960:CDS:7.1 | 133 | Chr1: 668613-668745 | Arabidopsis thaliana |
AT1G02960:CDS:6.1 | 132 | Chr1: 668856-668987 | Arabidopsis thaliana |
AT1G02960:CDS:5.1 | 56 | Chr1: 669079-669134 | Arabidopsis thaliana |
AT1G02960:CDS:4.1 | 40 | Chr1: 669227-669266 | Arabidopsis thaliana |
AT1G02960:CDS:3.1 | 53 | Chr1: 669461-669513 | Arabidopsis thaliana |
AT1G02960:CDS:2.1 | 31 | Chr1: 669620-669650 | Arabidopsis thaliana |
AT1G02960:CDS:1.1 | 24 | Chr1: 669750-669773 | Arabidopsis thaliana |
AT1G02960:CDS:15 | 140 | Chr1: 667325-667464 | Arabidopsis thaliana |
AT1G02960:CDS:11.1 | 101 | Chr1: 667541-667641 | Arabidopsis thaliana |
AT1G02960:CDS:10.2 | 134 | Chr1: 667735-667868 | Arabidopsis thaliana |
AT1G02960:CDS:9.2 | 126 | Chr1: 667957-668082 | Arabidopsis thaliana |
AT1G02960:CDS:8.2 | 296 | Chr1: 668173-668468 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G02960:exon:14 | 65 | Chr1: 667373-667437 | Arabidopsis thaliana |
AT1G02960:exon:15 | 491 | Chr1: 667151-667641 | Arabidopsis thaliana |
AT1G02960:exon:16 | 314 | Chr1: 667151-667464 | Arabidopsis thaliana |
AT1G02960:exon:13 | 92 | Chr1: 667373-667464 | Arabidopsis thaliana |
AT1G02960:exon:18 | 131 | Chr1: 667151-667281 | Arabidopsis thaliana |
AT1G02960:exon:12 | 269 | Chr1: 667373-667641 | Arabidopsis thaliana |
AT1G02960:exon:19 | 262 | Chr1: 666807-667068 | Arabidopsis thaliana |
AT1G02960:exon:17 | 287 | Chr1: 667151-667437 | Arabidopsis thaliana |
AT1G02960:exon:11 | 101 | Chr1: 667541-667641 | Arabidopsis thaliana |
AT1G02960:exon:10 | 134 | Chr1: 667735-667868 | Arabidopsis thaliana |
AT1G02960:exon:9 | 126 | Chr1: 667957-668082 | Arabidopsis thaliana |
AT1G02960:exon:8 | 296 | Chr1: 668173-668468 | Arabidopsis thaliana |
AT1G02960:exon:7 | 133 | Chr1: 668613-668745 | Arabidopsis thaliana |
AT1G02960:exon:6 | 132 | Chr1: 668856-668987 | Arabidopsis thaliana |
AT1G02960:exon:5 | 56 | Chr1: 669079-669134 | Arabidopsis thaliana |
AT1G02960:exon:4 | 40 | Chr1: 669227-669266 | Arabidopsis thaliana |
AT1G02960:exon:3 | 53 | Chr1: 669461-669513 | Arabidopsis thaliana |
AT1G02960:exon:2 | 31 | Chr1: 669620-669650 | Arabidopsis thaliana |
AT1G02960:exon:1 | 170 | Chr1: 669750-669919 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G02960:five_prime_UTR:1 | 146 | Chr1: 669774-669919 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G02960.1 | 1730 | Chr1: 666807-669919 |
AT1G02960.4 | 1924 | Chr1: 666807-669919 |
AT1G02960.5 | 1848 | Chr1: 666807-669919 |
AT1G02960.2 | 1757 | Chr1: 666807-669919 |
AT1G02960.6 | 1833 | Chr1: 666807-669919 |
AT1G02960.3 | 1821 | Chr1: 666807-669919 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G02960:three_prime_UTR:2 | 352 | Chr1: 667151-667502 | Arabidopsis thaliana |
AT1G02960:three_prime_UTR:6 | 195 | Chr1: 666807-667001 | Arabidopsis thaliana |
AT1G02960:three_prime_UTR:4 | 131 | Chr1: 667151-667281 | Arabidopsis thaliana |
AT1G02960:three_prime_UTR:1 | 130 | Chr1: 667373-667502 | Arabidopsis thaliana |
AT1G02960:three_prime_UTR:5 | 262 | Chr1: 666807-667068 | Arabidopsis thaliana |
AT1G02960:three_prime_UTR:3 | 174 | Chr1: 667151-667324 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE02175 | 765 | Chr1: 669867-670631 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE02175:transposon_fragment:1 | 765 | Chr1: 669867-670631 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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