External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 13, Exons: 10, Five Prime UTRs: 2, Gene: 1, mRNAs: 3, Three Prime UTRs: 3, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G02470:CDS:8 | 75 | Chr1: 511916-511990 | Arabidopsis thaliana |
AT1G02470:CDS:6 | 48 | Chr1: 512074-512121 | Arabidopsis thaliana |
AT1G02470:CDS:5 | 49 | Chr1: 512214-512262 | Arabidopsis thaliana |
AT1G02470:CDS:4 | 53 | Chr1: 512378-512430 | Arabidopsis thaliana |
AT1G02470:CDS:3 | 96 | Chr1: 512525-512620 | Arabidopsis thaliana |
AT1G02470:CDS:2 | 100 | Chr1: 513147-513246 | Arabidopsis thaliana |
AT1G02470:CDS:1 | 242 | Chr1: 513332-513573 | Arabidopsis thaliana |
AT1G02470:CDS:7 | 63 | Chr1: 512059-512121 | Arabidopsis thaliana |
AT1G02470:CDS:5.1 | 49 | Chr1: 512214-512262 | Arabidopsis thaliana |
AT1G02470:CDS:4.1 | 53 | Chr1: 512378-512430 | Arabidopsis thaliana |
AT1G02470:CDS:3.1 | 96 | Chr1: 512525-512620 | Arabidopsis thaliana |
AT1G02470:CDS:2.1 | 100 | Chr1: 513147-513246 | Arabidopsis thaliana |
AT1G02470:CDS:1.1 | 242 | Chr1: 513332-513573 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G02470:exon:9 | 226 | Chr1: 511765-511990 | Arabidopsis thaliana |
AT1G02470:exon:7 | 48 | Chr1: 512074-512121 | Arabidopsis thaliana |
AT1G02470:exon:1 | 390 | Chr1: 513332-513721 | Arabidopsis thaliana |
AT1G02470:exon:8 | 97 | Chr1: 512025-512121 | Arabidopsis thaliana |
AT1G02470:exon:6 | 49 | Chr1: 512214-512262 | Arabidopsis thaliana |
AT1G02470:exon:5 | 53 | Chr1: 512378-512430 | Arabidopsis thaliana |
AT1G02470:exon:4 | 96 | Chr1: 512525-512620 | Arabidopsis thaliana |
AT1G02470:exon:3 | 100 | Chr1: 513147-513246 | Arabidopsis thaliana |
AT1G02470:exon:2 | 367 | Chr1: 513332-513698 | Arabidopsis thaliana |
AT1G02475:exon:8 | 336 | Chr1: 513699-514034 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G02470:five_prime_UTR:1 | 148 | Chr1: 513574-513721 | Arabidopsis thaliana |
AT1G02470:five_prime_UTR:2 | 125 | Chr1: 513574-513698 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G02475 | locus:505006094 | AT1G02475 | 1724 | Chr1: 513699-515422 | A. thaliana | Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) | NULL | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G02470.1 | 962 | Chr1: 511765-513721 |
AT1G02470.2 | 762 | Chr1: 512025-513698 |
AT1G02475.1 | 1091 | Chr1: 513699-515422 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G02470:three_prime_UTR:2 | 151 | Chr1: 511765-511915 | Arabidopsis thaliana |
AT1G02470:three_prime_UTR:1 | 34 | Chr1: 512025-512058 | Arabidopsis thaliana |
AT1G02475:three_prime_UTR:2 | 336 | Chr1: 513699-514034 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE01660 | 22 | Chr1: 512671-512692 | Arabidopsis thaliana |
AT1TE01665 | 444 | Chr1: 512693-513136 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE01660:transposon_fragment:1 | 22 | Chr1: 512671-512692 | Arabidopsis thaliana |
AT1TE01665:transposon_fragment:1 | 444 | Chr1: 512693-513136 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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