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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G01320:CDS:24 | 1920 | Chr1: 121582-123501 | Arabidopsis thaliana |
AT1G01320:CDS:23 | 91 | Chr1: 123579-123669 | Arabidopsis thaliana |
AT1G01320:CDS:22 | 113 | Chr1: 123785-123897 | Arabidopsis thaliana |
AT1G01320:CDS:21 | 132 | Chr1: 123992-124123 | Arabidopsis thaliana |
AT1G01320:CDS:20 | 184 | Chr1: 124211-124394 | Arabidopsis thaliana |
AT1G01320:CDS:19 | 134 | Chr1: 124499-124632 | Arabidopsis thaliana |
AT1G01320:CDS:18 | 105 | Chr1: 124714-124818 | Arabidopsis thaliana |
AT1G01320:CDS:17 | 102 | Chr1: 124921-125022 | Arabidopsis thaliana |
AT1G01320:CDS:15 | 93 | Chr1: 125134-125226 | Arabidopsis thaliana |
AT1G01320:CDS:14 | 327 | Chr1: 125329-125655 | Arabidopsis thaliana |
AT1G01320:CDS:13 | 102 | Chr1: 125742-125843 | Arabidopsis thaliana |
AT1G01320:CDS:12 | 63 | Chr1: 125936-125998 | Arabidopsis thaliana |
AT1G01320:CDS:11 | 514 | Chr1: 126076-126589 | Arabidopsis thaliana |
AT1G01320:CDS:10 | 155 | Chr1: 126686-126840 | Arabidopsis thaliana |
AT1G01320:CDS:9 | 519 | Chr1: 126935-127453 | Arabidopsis thaliana |
AT1G01320:CDS:8 | 42 | Chr1: 127532-127573 | Arabidopsis thaliana |
AT1G01320:CDS:7 | 132 | Chr1: 127651-127782 | Arabidopsis thaliana |
AT1G01320:CDS:6 | 68 | Chr1: 127868-127935 | Arabidopsis thaliana |
AT1G01320:CDS:5 | 285 | Chr1: 128028-128312 | Arabidopsis thaliana |
AT1G01320:CDS:4 | 73 | Chr1: 128479-128551 | Arabidopsis thaliana |
AT1G01320:CDS:3 | 93 | Chr1: 128968-129060 | Arabidopsis thaliana |
AT1G01320:CDS:2 | 62 | Chr1: 129853-129914 | Arabidopsis thaliana |
AT1G01320:CDS:1 | 61 | Chr1: 130039-130099 | Arabidopsis thaliana |
AT1G01320:CDS:25 | 1914 | Chr1: 121582-123495 | Arabidopsis thaliana |
AT1G01320:CDS:23.1 | 91 | Chr1: 123579-123669 | Arabidopsis thaliana |
AT1G01320:CDS:22.1 | 113 | Chr1: 123785-123897 | Arabidopsis thaliana |
AT1G01320:CDS:21.1 | 132 | Chr1: 123992-124123 | Arabidopsis thaliana |
AT1G01320:CDS:20.1 | 184 | Chr1: 124211-124394 | Arabidopsis thaliana |
AT1G01320:CDS:19.1 | 134 | Chr1: 124499-124632 | Arabidopsis thaliana |
AT1G01320:CDS:18.1 | 105 | Chr1: 124714-124818 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G01310:exon:1 | 977 | Chr1: 120154-121130 | Arabidopsis thaliana |
AT1G01320:exon:2 | 202 | Chr1: 130372-130573 | Arabidopsis thaliana |
AT1G01320:exon:30 | 340 | Chr1: 121067-121406 | Arabidopsis thaliana |
AT1G01320:exon:28 | 2003 | Chr1: 121493-123495 | Arabidopsis thaliana |
AT1G01320:exon:20 | 102 | Chr1: 124921-125022 | Arabidopsis thaliana |
AT1G01320:exon:1 | 206 | Chr1: 130372-130577 | Arabidopsis thaliana |
AT1G01320:exon:29 | 283 | Chr1: 121124-121406 | Arabidopsis thaliana |
AT1G01320:exon:27 | 2009 | Chr1: 121493-123501 | Arabidopsis thaliana |
AT1G01320:exon:26 | 91 | Chr1: 123579-123669 | Arabidopsis thaliana |
AT1G01320:exon:25 | 113 | Chr1: 123785-123897 | Arabidopsis thaliana |
AT1G01320:exon:24 | 132 | Chr1: 123992-124123 | Arabidopsis thaliana |
AT1G01320:exon:23 | 184 | Chr1: 124211-124394 | Arabidopsis thaliana |
AT1G01320:exon:22 | 134 | Chr1: 124499-124632 | Arabidopsis thaliana |
AT1G01320:exon:21 | 105 | Chr1: 124714-124818 | Arabidopsis thaliana |
AT1G01320:exon:19 | 126 | Chr1: 124921-125046 | Arabidopsis thaliana |
AT1G01320:exon:18 | 93 | Chr1: 125134-125226 | Arabidopsis thaliana |
AT1G01320:exon:17 | 327 | Chr1: 125329-125655 | Arabidopsis thaliana |
AT1G01320:exon:16 | 102 | Chr1: 125742-125843 | Arabidopsis thaliana |
AT1G01320:exon:15 | 63 | Chr1: 125936-125998 | Arabidopsis thaliana |
AT1G01320:exon:14 | 514 | Chr1: 126076-126589 | Arabidopsis thaliana |
AT1G01320:exon:13 | 155 | Chr1: 126686-126840 | Arabidopsis thaliana |
AT1G01320:exon:12 | 519 | Chr1: 126935-127453 | Arabidopsis thaliana |
AT1G01320:exon:11 | 42 | Chr1: 127532-127573 | Arabidopsis thaliana |
AT1G01320:exon:10 | 132 | Chr1: 127651-127782 | Arabidopsis thaliana |
AT1G01320:exon:9 | 68 | Chr1: 127868-127935 | Arabidopsis thaliana |
AT1G01320:exon:8 | 285 | Chr1: 128028-128312 | Arabidopsis thaliana |
AT1G01320:exon:7 | 73 | Chr1: 128479-128551 | Arabidopsis thaliana |
AT1G01320:exon:6 | 93 | Chr1: 128968-129060 | Arabidopsis thaliana |
AT1G01320:exon:5 | 62 | Chr1: 129853-129914 | Arabidopsis thaliana |
AT1G01320:exon:4 | 111 | Chr1: 130039-130149 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G01320:five_prime_UTR:2 | 202 | Chr1: 130372-130573 | Arabidopsis thaliana |
AT1G01320:five_prime_UTR:1 | 206 | Chr1: 130372-130577 | Arabidopsis thaliana |
AT1G01320:five_prime_UTR:4 | 50 | Chr1: 130100-130149 | Arabidopsis thaliana |
AT1G01320:five_prime_UTR:3 | 199 | Chr1: 130372-130570 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G01310 | locus:2035317 | AT1G01310 | 977 | Chr1: 120154-121130 | A. thaliana | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) | NULL | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G01310.1 | 977 | Chr1: 120154-121130 |
AT1G01320.3 | 6051 | Chr1: 121067-130573 |
AT1G01320.2 | 6049 | Chr1: 121067-130577 |
AT1G01320.1 | 6015 | Chr1: 121124-130570 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G01310:three_prime_UTR:1 | 184 | Chr1: 120947-121130 | Arabidopsis thaliana |
AT1G01320:three_prime_UTR:3 | 340 | Chr1: 121067-121406 | Arabidopsis thaliana |
AT1G01320:three_prime_UTR:2 | 283 | Chr1: 121124-121406 | Arabidopsis thaliana |
AT1G01320:three_prime_UTR:1 | 89 | Chr1: 121493-121581 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
REC1_ARATH | function | May act as the scaffold of a protein complex, which sequesters key factors that are required for the G2 to M transition in meristematic tissues (By similarity). Together with REC2, REC3 and FMT/CLU, contributes to the establishment of the cellular volume devoted to the chloroplast compartment (PubMed:26862170). |
REC1_ARATH | subcellular location | Excluded from the nucleus upon treatment with amitrole, which inhibits cell expansion and chloroplast function. |
Function
Gene Ontology
cellular component | |
---|---|
cytoplasm | ECO |
extracellular region | ECO |
cytosol | ECO |
nucleus | ECO |
molecular function | |
mRNA binding | ECO |
biological process | |
organelle organization | ECO |
regulation of glucose metabolic process | ECO |
chloroplast localization | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...