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Search results 1 to 100 out of 326 for inflorescence

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Type Details Score
Gene
AT3G51740 | locus:2098267 | IMK2 | inflorescence meristem receptor-like kinase 2
Length: 3318  
Chromosome Location: Chr3: 19188844-19192161
Organism . Short Name: A. thaliana
TAIR Computational Description: inflorescence meristem receptor-like kinase 2;(source:Araport11)
TAIR Curator Summary: encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. The mRNA is cell-to-cell mobile.
TAIR Short Description: inflorescence meristem receptor-like kinase 2
TAIR Aliases: IMK2
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Gene
AT5G06250 | locus:2164215 | DPA4 | DEVELOPMENT-RELATED PcG TARGET IN THE APEX 4
Length: 2474  
Chromosome Location: Chr5: 1891880-1894353
Organism . Short Name: A. thaliana
TAIR Computational Description: AP2/B3-like transcriptional factor family protein;(source:Araport11)
TAIR Curator Summary: Transcription repressor involved in regulation of inflorescence architecture.
TAIR Short Description: AP2/B3-like transcriptional factor family protein
TAIR Aliases: DPA4, NGAL3
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Gene
AT3G58070 | locus:2095883 | GIS | GLABROUS INFLORESCENCE STEMS
Length: 1168  
Chromosome Location: Chr3: 21506572-21507739
Organism . Short Name: A. thaliana
TAIR Computational Description: C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11)
TAIR Curator Summary: Putative transcription factor, contains C2H2 domain, regulates aspects of shoot maturation in Arabidopsis thaliana. GIS loss-of-function mutations affect the epidermal differentiation of inflorescence organs, causing a premature decrease in trichome production on successive leaves, stem internodes, and branches. Overexpression has the opposite effect on trichome initiation and causes other heterochronic phenotypes, affecting flowering and juvenile–adult leaf transition and inducing the formation of rosette leaves on inflorescence stems.
TAIR Short Description: C2H2 and C2HC zinc fingers superfamily protein
TAIR Aliases: GIS
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Gene
AT4G29010 | locus:2119891 | AIM1 | ABNORMAL INFLORESCENCE MERISTEM
Length: 5244  
Chromosome Location: Chr4: 14297044-14302287
Organism . Short Name: A. thaliana
TAIR Computational Description: Enoyl-CoA hydratase/isomerase family;(source:Araport11)
TAIR Curator Summary: Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities.
TAIR Short Description: Enoyl-CoA hydratase/isomerase family
TAIR Aliases: AIM1
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Gene
AT3G18715 | locus:4010713757 | IDL4 | inflorescence deficient in abscission (IDA)-like 4
Length: 769  
Chromosome Location: Chr3: 6440817-6441585
Organism . Short Name: A. thaliana
TAIR Computational Description: inflorescence deficient in abscission (IDA)-like 4;(source:Araport11)
TAIR Curator Summary: Similar to Inflorescance deficient in abscission (IDA). Involved in floral organ abscission.
TAIR Short Description: inflorescence deficient in abscission (IDA)-like 4
TAIR Aliases: IDL4
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Gene
AT3G25655 | locus:505006375 | IDL1 | inflorescence deficient in abscission (IDA)-like 1
Length: 645  
Chromosome Location: Chr3: 9337431-9338075
Organism . Short Name: A. thaliana
TAIR Computational Description: inflorescence deficient in abscission (IDA)-like 1;(source:Araport11)
TAIR Curator Summary: Similar to Inflorescence Deficient in Abscission (IDA). Involved in floral organ abscission.
TAIR Short Description: inflorescence deficient in abscission (IDA)-like 1
TAIR Aliases: IDL1
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Gene
AT5G09805 | locus:4010713951 | IDL3 | inflorescence deficient in abscission (IDA)-like 3
Length: 743  
Chromosome Location: Chr5: 3047011-3047753
Organism . Short Name: A. thaliana
TAIR Computational Description: inflorescence deficient in abscission (IDA)-like 3;(source:Araport11)
TAIR Curator Summary: Similar to Inflorescence deficient in abscission (IDA). Involved in floral organ abscission.
TAIR Short Description: inflorescence deficient in abscission (IDA)-like 3
TAIR Aliases: IDL3
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Gene
AT1G76952 | locus:4010713599 | IDL5 | inflorescence deficient in abscission (IDA)-like 5
Length: 657  
Chromosome Location: Chr1: 28914446-28915102
Organism . Short Name: A. thaliana
TAIR Computational Description: inflorescence deficient in abscission (IDA)-like 5;(source:Araport11)
TAIR Curator Summary: Similar to Inflorescence deficient in abscission (IDA). Involved in floral organ abscission.
TAIR Short Description: inflorescence deficient in abscission (IDA)-like 5
TAIR Aliases: IDL5
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Gene
AT5G64667 | locus:4010714076 | IDL2 | inflorescence deficient in abscission (IDA)-like 2
Length: 867  
Chromosome Location: Chr5: 25850509-25851375
Organism . Short Name: A. thaliana
TAIR Computational Description: inflorescence deficient in abscission (IDA)-like 2;(source:Araport11)
TAIR Curator Summary: Similar to Inflorescence deficient in abscission (IDA). Involved in floral organ abscission.
TAIR Short Description: inflorescence deficient in abscission (IDA)-like 2
TAIR Aliases: IDL2
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Protein
A0A2H1ZEG5_ARATH | A0A2H1ZEG5
Organism . Name: Arabidopsis thaliana
Length: 102  
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Gene
AT5G06650 | locus:2144168 | GIS2 | GLABROUS INFLORESCENCE STEMS 2
Length: 782  
Chromosome Location: Chr5: 2043419-2044200
Organism . Short Name: A. thaliana
TAIR Computational Description: C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11)
TAIR Curator Summary: Together with GIS and ZPF8 plays partially redundant and essential role in inflorescence trichome initiation and in its regulation by GA and cytokinins.
TAIR Short Description: C2H2 and C2HC zinc fingers superfamily protein
TAIR Aliases: GIS2
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Gene
AT1G68765 | locus:505006209 | IDA | INFLORESCENCE DEFICIENT IN ABSCISSION
Length: 865  
Chromosome Location: Chr1: 25829917-25830781
Organism . Short Name: A. thaliana
TAIR Computational Description: Putative membrane lipoprotein;(source:Araport11)
TAIR Curator Summary: Encodes a small protein of 77 amino acids. Loss of function mutations are defective in the process of ethylene independent floral organ abscission. Although the mutants have a normal appearing abscission zone, the floral organs do not abscisce. The peptide appears to be secreted and may function as a ligand. Arabidopsis 35S:IDA lines constitutively overexpressing IDA exhibit earlier abscission of floral organs, showing that the abscission zones are responsive to IDA soon after the opening of the flowers. In addition, ectopic abscission was observed at the bases of the pedicel, branches of the inflorescence, and cauline leaves. The silique valves also dehisced prematurely.
TAIR Short Description: Putative membrane lipoprotein
TAIR Aliases: IDA
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Gene
AT4G17980 | locus:2141075 | NAC071 | NAC domain containing protein 71
Length: 1853  
Chromosome Location: Chr4: 9978703-9980555
Organism . Short Name: A. thaliana
TAIR Computational Description: NAC domain containing protein 71;(source:Araport11)
TAIR Curator Summary: Encodes ANAC071, a transcription factor involved in cell proliferation in incised inflorescence stems.
TAIR Short Description: NAC domain containing protein 71
TAIR Aliases: anac071, NAC071
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Gene
AT4G01190 | locus:2125098 | PIPK10 | phosphatidylinositol phosphate kinase 10
Length: 2269  
Chromosome Location: Chr4: 504135-506403
Organism . Short Name: A. thaliana
TAIR Computational Description: phosphatidylinositol phosphate kinase 10;(source:Araport11)
TAIR Curator Summary: Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. Preferentially phosphorylates PtdIns4P. Expressed in flowers and inflorescence stems.
TAIR Short Description: phosphatidylinositol phosphate kinase 10
TAIR Aliases: ATPIPK10, PIP5K11, PIPK10
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Protein Domain
IPR039923
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Protein Domain
IPR044291
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Gene
AT5G03840 | locus:2150595 | TFL1 | TERMINAL FLOWER 1
Length: 1373  
Chromosome Location: Chr5: 1024500-1025872
Organism . Short Name: A. thaliana
TAIR Computational Description: PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11)
TAIR Curator Summary: Controls inflorescence meristem identity. Involved in the floral initiation process. Ortholog of the Antirrhinum gene CENTRORADIALIS (CEN). Involved in protein trafficking to the protein storage vacuole. TFL1 plays an antagonistic role to FT/TSF in the determination of inflorescence meristem identity.
TAIR Short Description: PEBP (phosphatidylethanolamine-binding protein) family protein
TAIR Aliases: TFL-1, TFL1
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Gene
AT4G24470 | locus:2135937 | ZIM | Zinc-finger protein expressed in Inflorescence Meristem
Length: 2444  
Chromosome Location: Chr4: 12645542-12647985
Organism . Short Name: A. thaliana
TAIR Computational Description: GATA-type zinc finger protein with TIFY domain-containing protein;(source:Araport11)
TAIR Curator Summary: ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.
TAIR Short Description: GATA-type zinc finger protein with TIFY domain
TAIR Aliases: AtTIFY1, GATA25, TIFY1, ZIM
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Protein Domain
IPR044989
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GO Term
GO:0010081 | regulation of inflorescence meristem growth
Description: Any process involved in maintaining the size and shape of an inflorescence meristem.
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Ontology Term Synonym
Ontology Term Synonym
Name: photoperiodic control of inflorescence development
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: regulation of inflorescence meristem size
Type: synonym
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Gene
AT5G35770 | locus:2177271 | SAP | STERILE APETALA
Length: 4782  
Chromosome Location: Chr5: 13936086-13940867
Organism . Short Name: A. thaliana
TAIR Computational Description: Transducin/WD40 repeat-like superfamily protein;(source:Araport11)
TAIR Curator Summary: A recessive mutation in the Arabidopsis STERILE APETALA (SAP) causes severe aberrations in inflorescence and flower and ovule development.
TAIR Short Description: Transducin/WD40 repeat-like superfamily protein
TAIR Aliases: SAP
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GO Term
GO:0010229 | inflorescence development
Description: The process whose specific outcome is the progression of an inflorescence over time, from its formation to the mature structure.
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GO Term
GO:0048281 | inflorescence morphogenesis
Description: The process in which the anatomical structures of inflorescences are generated and organized. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers.
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Protein Domain
IPR037848
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Gene
AT3G07050 | locus:2077587 | NSN1 | nucleostemin-like 1
Length: 3007  
Chromosome Location: Chr3: 2229355-2232361
Organism . Short Name: A. thaliana
TAIR Computational Description: GTP-binding family protein;(source:Araport11)
TAIR Curator Summary: Arabidopsis NSN1 encodes a nucleolar GTP- binding protein and is required for maintenance of inflorescence meristem identity and floral organ development.
TAIR Short Description: GTP-binding family protein
TAIR Aliases: NSN1
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Protein Domain
IPR020533
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Ontology Term Synonym
Ontology Term Synonym
Name: short-day photoperiodic control of inflorescence development
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: long-day photoperiodic control of inflorescence development
Type: synonym
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Gene
AT2G17040 | locus:2827676 | NAC036 | NAC domain containing protein 36
Length: 1483  
Chromosome Location: Chr2: 7406911-7408393
Organism . Short Name: A. thaliana
TAIR Computational Description: NAC domain containing protein 36;(source:Araport11)
TAIR Curator Summary: Member of the NAC transcription factor family and more specifically, the ONAC022 subfamily. Involved in leaf and inflorescence stem morphogenesis. The mRNA is cell-to-cell mobile.
TAIR Short Description: NAC domain containing protein 36
TAIR Aliases: anac036, NAC036
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Gene
AT2G42840 | locus:2052408 | PDF1 | protodermal factor 1
Length: 1578  
Chromosome Location: Chr2: 17826071-17827648
Organism . Short Name: A. thaliana
TAIR Computational Description: protodermal factor 1;(source:Araport11)
TAIR Curator Summary: Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.
TAIR Short Description: protodermal factor 1
TAIR Aliases: PDF1
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Gene
AT2G36810 | locus:2040585 | AT2G36810 | -
Length: 14322  
Chromosome Location: Chr2: 15425321-15439642
Organism . Short Name: A. thaliana
TAIR Computational Description: ARM repeat superfamily protein;(source:Araport11)
TAIR Curator Summary: Specifically involved in gravity perception and/or gravity signal transduction for the shoot gravitropic response. Effects gravitropism only in inflorescence stems but normal in both hypocotyls and roots.
TAIR Short Description: ARM repeat superfamily protein
TAIR Aliases: SGR6
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Gene
AT2G46640 | locus:2039993 | AT2G46640 | -
Length: 2419  
Chromosome Location: Chr2: 19148662-19151080
Organism . Short Name: A. thaliana
TAIR Computational Description: NAD-dependent protein deacetylase HST1-like protein;(source:Araport11)
TAIR Curator Summary: Encodes TAC1 (Tiller Angle Control 1). Influences axillary branch growth angle. Inflorescence stems of TAC1 mutants are vertically oriented and have axillary shoots with narrow branch angles.
TAIR Short Description: NULL
TAIR Aliases: TAC1
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GO Term
GO:0010450 | inflorescence meristem growth
Description: The increase in size or mass of an inflorescence meristem, a population of undifferentiated cells in a plant shoot which produces small leaves and then floral meristems, which will give rise to flowers.
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GO Term
GO:0048282 | determinate inflorescence morphogenesis
Description: The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can only produce a predetermined number of floral meristems.
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GO Term
GO:0048283 | indeterminate inflorescence morphogenesis
Description: The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can produce an undefined number of floral meristems.
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GO Term
GO:0090643 | inflorescence phyllotactic patterning
Description: The radial pattern formation process that results in the formation of flowers around a central axis in an inflorescence meristem.
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Ontology Term Synonym
Ontology Term Synonym
Name: regulation of photoperiodic control of inflorescence development
Type: synonym
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Gene
AT2G41940 | locus:2064579 | ZFP8 | zinc finger protein 8
Length: 1274  
Chromosome Location: Chr2: 17507343-17508616
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger protein 8;(source:Araport11)
TAIR Curator Summary: Encodes a zinc finger protein containing only a single zinc finger. Together with GIS and GIS2 plays partially redundant and essential role in inflorescence trichome initiation and in its regulation by GA and cytokinins.
TAIR Short Description: zinc finger protein 8
TAIR Aliases: ZFP8
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Gene
AT4G04890 | locus:2135368 | PDF2 | protodermal factor 2
Length: 6058  
Chromosome Location: Chr4: 2476390-2482447
Organism . Short Name: A. thaliana
TAIR Computational Description: protodermal factor 2;(source:Araport11)
TAIR Curator Summary: Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.
TAIR Short Description: protodermal factor 2
TAIR Aliases: PDF2
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Publication
16054429
First Author: Schmitz G
Title: Shoot and inflorescence branching.
Year: 2005
Journal: Curr Opin Plant Biol
Volume: 8
Pages: 506-11
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Gene
AT3G11580 | locus:2080782 | AT3G11580 | -
Length: 2825  
Chromosome Location: Chr3: 3648902-3651726
Organism . Short Name: A. thaliana
TAIR Computational Description: AP2/B3-like transcriptional factor family protein;(source:Araport11)
TAIR Curator Summary: SOD7 encodes nuclear localized B3 DNA binding domain and a transcriptional repression motif. Belongs to the RAV gene family. Functions in regulation of seed size and binds to and represses KLU. Transcription repressor involved in regulation of inflorescence architecture.
TAIR Short Description: AP2/B3-like transcriptional factor family protein
TAIR Aliases: NGAL2, SOD7
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Publication
11439140
First Author: Goosey L
Title: The Arabidopsis compact inflorescence genes: phase-specific growth regulation and the determination of inflorescence architecture.
Year: 2001
Journal: Plant J
Volume: 26
Pages: 549-59
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Gene
AT1G73177 | locus:505006219 | BNS | BONSAI
Length: 1311  
Chromosome Location: Chr1: 27516572-27517882
Organism . Short Name: A. thaliana
TAIR Computational Description: bonsai;(source:Araport11)
TAIR Curator Summary: The BONSAI gene encodes a protein with similarity to the APC13 component of the Anaphase Promoting Complex. Plants with lowered level of BONSAI expression, resulting from hypomethylation, RNAi knock-down, or a T-DNA insertion show some abnormalities in shoot and inflorescence development.
TAIR Short Description: bonsai
TAIR Aliases: APC13, BNS
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Gene
AT4G28190 | locus:2123668 | ULT1 | ULTRAPETALA1
Length: 2816  
Chromosome Location: Chr4: 13984695-13987510
Organism . Short Name: A. thaliana
TAIR Computational Description: Developmental regulator, ULTRAPETALA;(source:Araport11)
TAIR Curator Summary: Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.ULT1 acts as an anti-repressor that counteracts EMF1 action through modulation of histone marks on target genes. Regulates developmental as well as biotic and abiotic stress response genes.
TAIR Short Description: Developmental regulator, ULTRAPETALA
TAIR Aliases: ULT, ULT1
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Gene
AT5G48070 | locus:2162652 | XTH20 | xyloglucan endotransglucosylase/hydrolase 20
Length: 1631  
Chromosome Location: Chr5: 19481897-19483527
Organism . Short Name: A. thaliana
TAIR Computational Description: xyloglucan endotransglucosylase/hydrolase 20;(source:Araport11)
TAIR Curator Summary: putative xyloglucan endotransglycosylase/hydrolase, expressed primarily in the stele of mature non-elongating regions of both the main and the lateral root. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. Involved in cell proliferation in incised inflorescence stems.
TAIR Short Description: xyloglucan endotransglucosylase/hydrolase 20
TAIR Aliases: ATXTH20, XTH20
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Protein
GIS2_ARATH | Q9FG05
Organism . Name: Arabidopsis thaliana
Length: 191  
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Gene
AT1G69850 | locus:2196739 | NRT1:2 | nitrate transporter 1:2
Length: 4145  
Chromosome Location: Chr1: 26296540-26300684
Organism . Short Name: A. thaliana
TAIR Computational Description: nitrate transporter 1:2;(source:Araport11)
TAIR Curator Summary: Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots. It also acts as an ABA importer at the site of ABA biosynthesis and is important for the regulation of stomatal aperture in inflorescence stems.
TAIR Short Description: nitrate transporter 1:2
TAIR Aliases: AIT1, AtNPF4.6, ATNRT1:2, NPF4.6, NRT1.2, NRT1:2, NTL1
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Gene
AT1G74540 | locus:2019240 | CYP98A8 | cytochrome P450, family 98, subfamily A, polypeptide 8
Length: 1870  
Chromosome Location: Chr1: 28013180-28015049
Organism . Short Name: A. thaliana
TAIR Computational Description: cytochrome P450, family 98, subfamily A, polypeptide 8;(source:Araport11)
TAIR Curator Summary: Encodes a tricoumaroylspermidine / triferuloylspermidine meta-hydroxylase that participates in the formation of N1,N5-di(hydroxyferuloyol)- N10-sinapoyl spermidine, an important constituent of pollen. This gene appears to be expressed in young flower buds and inflorescence tips with notably high levels of expression in the tapetum and pollen.
TAIR Short Description: cytochrome P450, family 98, subfamily A, polypeptide 8
TAIR Aliases: CYP98A8
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Gene
AT5G47880 | locus:2160972 | ERF1-1 | eukaryotic release factor 1-1
Length: 2543  
Chromosome Location: Chr5: 19386045-19388587
Organism . Short Name: A. thaliana
TAIR Computational Description: eukaryotic release factor 1-1;(source:Araport11)
TAIR Curator Summary: Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones.
TAIR Short Description: eukaryotic release factor 1-1
TAIR Aliases: AteRF1-1, ERF1-1
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Gene
AT2G20430 | locus:2054820 | RIC6 | ROP-interactive CRIB motif-containing protein 6
Length: 1787  
Chromosome Location: Chr2: 8808414-8810200
Organism . Short Name: A. thaliana
TAIR Computational Description: ROP-interactive CRIB motif-containing protein 6;(source:Araport11)
TAIR Curator Summary: encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC7 and RIC8 (subfamily group II). Gene is expressed predominantly in inflorescence and flower tissue.
TAIR Short Description: ROP-interactive CRIB motif-containing protein 6
TAIR Aliases: RIC6
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Gene
AT3G17800 | locus:2088490 | AT3G17800 | -
Length: 2042  
Chromosome Location: Chr3: 6091110-6093151
Organism . Short Name: A. thaliana
TAIR Computational Description: alanine-tRNA ligase, putative (DUF760);(source:Araport11)
TAIR Curator Summary: mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem. Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation. Likely involved in senescence. Forms a small module with CLPD, connecting to DUF179-3, CLPX1, and CLPB3.
TAIR Short Description: Protein of unknown function (DUF760)
TAIR Aliases: DUF760-6, DUF760?5
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Gene
AT3G23380 | locus:2090880 | RIC5 | ROP-interactive CRIB motif-containing protein 5
Length: 1724  
Chromosome Location: Chr3: 8373375-8375098
Organism . Short Name: A. thaliana
TAIR Computational Description: ROP-interactive CRIB motif-containing protein 5;(source:Araport11)
TAIR Curator Summary: encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Gene is expressed predominantly in inflorescence and flower tissue.
TAIR Short Description: ROP-interactive CRIB motif-containing protein 5
TAIR Aliases: RIC5
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Gene
AT1G74550 | locus:2019250 | CYP98A9 | cytochrome P450, family 98, subfamily A, polypeptide 9
Length: 1667  
Chromosome Location: Chr1: 28016045-28017711
Organism . Short Name: A. thaliana
TAIR Computational Description: cytochrome P450, family 98, subfamily A, polypeptide 9;(source:Araport11)
TAIR Curator Summary: Encodes a tricoumaroylspermidine meta-hydroxylase that participates in the formation of N1,N5-di(hydroxyferuloyol)- N10-sinapoylspermidine, an important constituent of pollen. This gene appears to be expressed in young flower buds and inflorescence tips with notably high levels of expression in the tapetum and pollen. It is also expressed in root tips.
TAIR Short Description: cytochrome P450, family 98, subfamily A, polypeptide 9
TAIR Aliases: CYP98A9
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Gene
AT1G75040 | locus:2037235 | PR5 | pathogenesis-related gene 5
Length: 1353  
Chromosome Location: Chr1: 28177670-28179022
Organism . Short Name: A. thaliana
TAIR Computational Description: pathogenesis-related protein 5;(source:Araport11)
TAIR Curator Summary: Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment. The mRNA is cell-to-cell mobile.
TAIR Short Description: pathogenesis-related gene 5
TAIR Aliases: PR-5, PR5
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Publication
8974397
First Author: Bradley D
Title: Inflorescence commitment and architecture in Arabidopsis.
Year: 1997
Journal: Science
Volume: 275
Pages: 80-3
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Publication
9401124
First Author: Chen L
Title: EMF genes regulate Arabidopsis inflorescence development.
Year: 1997
Journal: Plant Cell
Volume: 9
Pages: 2011-24
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Gene
AT3G57880 | locus:2095853 | AT3G57880 | -
Length: 3727  
Chromosome Location: Chr3: 21430922-21434648
Organism . Short Name: A. thaliana
TAIR Computational Description: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11)
TAIR Curator Summary: Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region.
TAIR Short Description: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
TAIR Aliases: FTIP3, MCTP3
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Gene
AT4G15880 | locus:2130864 | ESD4 | EARLY IN SHORT DAYS 4
Length: 3628  
Chromosome Location: Chr4: 9012552-9016179
Organism . Short Name: A. thaliana
TAIR Computational Description: Cysteine proteinases superfamily protein;(source:Araport11)
TAIR Curator Summary: EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile.
TAIR Short Description: Cysteine proteinases superfamily protein
TAIR Aliases: ATESD4, ESD4
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Gene
AT1G51570 | locus:2017627 | AT1G51570 | -
Length: 3215  
Chromosome Location: Chr1: 19122161-19125375
Organism . Short Name: A. thaliana
TAIR Computational Description: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11)
TAIR Curator Summary: Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region.
TAIR Short Description: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
TAIR Aliases: FTIP4, MCTP4
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Gene
AT5G17690 | locus:2176006 | TFL2 | TERMINAL FLOWER 2
Length: 2622  
Chromosome Location: Chr5: 5827142-5829763
Organism . Short Name: A. thaliana
TAIR Computational Description: like heterochromatin protein (LHP1);(source:Araport11)
TAIR Curator Summary: Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.
TAIR Short Description: like heterochromatin protein (LHP1)
TAIR Aliases: AtLHP1, LHP1, TFL2
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Publication
17652113
First Author: Yamaguchi N
Title: CRM1/BIG-mediated auxin action regulates Arabidopsis inflorescence development.
Year: 2007
Journal: Plant Cell Physiol
Volume: 48
Pages: 1275-90
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Protein
GIS_ARATH | Q84WI0
Organism . Name: Arabidopsis thaliana
Length: 253  
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Protein
IDA_ARATH | Q8LAD7
Organism . Name: Arabidopsis thaliana
Length: 77  
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Protein
GIS3_ARATH | Q9C9H1
Organism . Name: Arabidopsis thaliana
Length: 244  
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Protein
IMK2_ARATH | Q9SCT4
Organism . Name: Arabidopsis thaliana
Length: 836  
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Gene
AT4G30290 | locus:2118751 | XTH19 | xyloglucan endotransglucosylase/hydrolase 19
Length: 1513  
Chromosome Location: Chr4: 14828712-14830224
Organism . Short Name: A. thaliana
TAIR Computational Description: xyloglucan endotransglucosylase/hydrolase 19;(source:Araport11)
TAIR Curator Summary: Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. Involved in cell proliferation in incised inflorescence stems.
TAIR Short Description: xyloglucan endotransglucosylase/hydrolase 19
TAIR Aliases: ATXTH19, XTH19
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Gene
AT2G45660 | locus:2005522 | AGL20 | AGAMOUS-like 20
Length: 3621  
Chromosome Location: Chr2: 18807505-18811125
Organism . Short Name: A. thaliana
TAIR Computational Description: AGAMOUS-like 20;(source:Araport11)
TAIR Curator Summary: Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.
TAIR Short Description: AGAMOUS-like 20
TAIR Aliases: AGL20, ATSOC1, SOC1
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Gene
AT3G27310 | locus:2086493 | PUX1 | plant UBX domain-containing protein 1
Length: 2155  
Chromosome Location: Chr3: 10087106-10089260
Organism . Short Name: A. thaliana
TAIR Computational Description: plant UBX domain-containing protein 1;(source:Araport11)
TAIR Curator Summary: encodes a protein that contains a UBX domain and regulates AtCDC48 by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer. Phenotypic analysis of pux1 plants revealed that the loss of PUX1 accelerated the growth of various plant organs including roots and inflorescence shoots. AtCDC48 and SYP31 colocalize at the division plane during cytokinesis and to interact in vitro and in vivo.
TAIR Short Description: plant UBX domain-containing protein 1
TAIR Aliases: PUX1
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Gene
AT1G73590 | locus:2035037 | PIN1 | PIN-FORMED 1
Length: 3581  
Chromosome Location: Chr1: 27659673-27663253
Organism . Short Name: A. thaliana
TAIR Computational Description: Auxin efflux carrier family protein;(source:Araport11)
TAIR Curator Summary: Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.
TAIR Short Description: Auxin efflux carrier family protein
TAIR Aliases: ATPIN1, PIN1
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GO Term
GO:0010077 | maintenance of inflorescence meristem identity
Description: The process in which an organism retains a population of inflorescence meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.
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Publication
11910003
First Author: Douglas SJ
Title: KNAT1 and ERECTA regulate inflorescence architecture in Arabidopsis.
Year: 2002
Journal: Plant Cell
Volume: 14
Pages: 547-58
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Publication
12271079
First Author: Shannon S
Title: Genetic Interactions That Regulate Inflorescence Development in Arabidopsis.
Year: 1993
Journal: Plant Cell
Volume: 5
Pages: 639-655
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Gene
AT4G29170 | locus:2119881 | ATMND1 | -
Length: 2647  
Chromosome Location: Chr4: 14382819-14385465
Organism . Short Name: A. thaliana
TAIR Computational Description: Mnd1 family protein;(source:Araport11)
TAIR Curator Summary: A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.
TAIR Short Description: Mnd1 family protein
TAIR Aliases: ATMND1
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Gene
AT1G79280 | locus:2207390 | NUA | nuclear pore anchor
Length: 14047  
Chromosome Location: Chr1: 29818970-29833016
Organism . Short Name: A. thaliana
TAIR Computational Description: nuclear pore anchor;(source:Araport11)
TAIR Curator Summary: Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.
TAIR Short Description: nuclear pore anchor
TAIR Aliases: AtTPR, NUA
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Gene
AT2G39660 | locus:2039772 | BIK1 | botrytis-induced kinase1
Length: 2460  
Chromosome Location: Chr2: 16531527-16533986
Organism . Short Name: A. thaliana
TAIR Computational Description: botrytis-induced kinase1;(source:Araport11)
TAIR Curator Summary: Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens. Together with ER plays opposing roles in leaf morphogenesis and inflorescence architecture. Required to maintain appropriate auxin response during leaf margin morphogenesis. Interacts with ER-family proteins and directly phosphorylates ER.
TAIR Short Description: botrytis-induced kinase1
TAIR Aliases: BIK1
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Gene
AT1G70510 | locus:2026810 | KNAT2 | KNOTTED-like from Arabidopsis thaliana 2
Length: 6394  
Chromosome Location: Chr1: 26576486-26582879
Organism . Short Name: A. thaliana
TAIR Computational Description: homeobox knotted-like protein;(source:Araport11)
TAIR Curator Summary: A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.
TAIR Short Description: KNOTTED-like from Arabidopsis thaliana 2
TAIR Aliases: ATK1, KNAT2
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Protein
AIM1_ARATH | Q9ZPI6
Organism . Name: Arabidopsis thaliana
Length: 721  
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Gene
AT1G04450 | locus:2018369 | RIC3 | ROP-interactive CRIB motif-containing protein 3
Length: 1506  
Chromosome Location: Chr1: 1208521-1210026
Organism . Short Name: A. thaliana
TAIR Computational Description: ROP-interactive CRIB motif-containing protein 3;(source:Araport11)
TAIR Curator Summary: Encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. The protein most similar to RIC1 (family subgroup III). Gene is expressed predominantly in inflorescence and flower tissue. Interacts with ROP1 to modulate calcium ion influxes required to generate tip-focused calcium gradients.It
TAIR Short Description: ROP-interactive CRIB motif-containing protein 3
TAIR Aliases: RIC3
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Gene
AT5G37055 | locus:505006661 | SEF | SERRATED LEAVES AND EARLY FLOWERING
Length: 1072  
Chromosome Location: Chr5: 14641442-14642513
Organism . Short Name: A. thaliana
TAIR Computational Description: HIT-type Zinc finger family protein;(source:Araport11)
TAIR Curator Summary: Encodes SERRATED LEAVES AND EARLY FLOWERING (SEF), an Arabidopsis homolog of the yeast SWC6 protein, a conserved subunit of the SWR1/SRCAP complex. SEF loss-of-function mutants have a pleiotropic phenotype characterized by serrated leaves, frequent absence of inflorescence internodes, bushy aspect, and flowers with altered number and size of organs. sef plants flower earlier than wild-type plants both under inductive and non-inductive photoperiods. SEF, ARP6 and PIE1 might form a molecular complex in Arabidopsis related to the SWR1/SRCAP complex identified in other eukaryotes.
TAIR Short Description: HIT-type Zinc finger family protein
TAIR Aliases: ATSWC6, SEF
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Publication
15908440
First Author: Niinuma K
Title: Circadian rhythm of circumnutation in inflorescence stems of Arabidopsis.
Year: 2005
Journal: Plant Cell Physiol
Volume: 46
Pages: 1423-7
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Gene
AT1G65480 | locus:2034168 | FT | FLOWERING LOCUS T
Length: 2627  
Chromosome Location: Chr1: 24331373-24333999
Organism . Short Name: A. thaliana
TAIR Computational Description: PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11)
TAIR Curator Summary: FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). Together with TSF, it plays an antagonistic role to TFL1 in the determination of inflorescence meristem identity. FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.
TAIR Short Description: PEBP (phosphatidylethanolamine-binding protein) family protein
TAIR Aliases: FT, RSB8
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mRNA
AT3G58070.1
Length: 1168  
Chromosome Location: Chr3: 21506572-21507739
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mRNA
AT4G29010.1
Length: 2705  
Chromosome Location: Chr4: 14297044-14302287
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Protein Domain
IPR031140
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Publication
10521521
First Author: Richmond TA
Title: A defect in beta-oxidation causes abnormal inflorescence development in Arabidopsis.
Year: 1999
Journal: Plant Cell
Volume: 11
Pages: 1911-24
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Publication
15155890
First Author: Bao X
Title: Repression of AGAMOUS by BELLRINGER in floral and inflorescence meristems.
Year: 2004
Journal: Plant Cell
Volume: 16
Pages: 1478-89
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Publication
12324613
First Author: Schultz EA
Title: LEAFY, a Homeotic Gene That Regulates Inflorescence Development in Arabidopsis.
Year: 1991
Journal: Plant Cell
Volume: 3
Pages: 771-781
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Publication
24989784
First Author: Fernández-Nohales P
Title: AGO1 controls arabidopsis inflorescence architecture possibly by regulating TFL1 expression.
Year: 2014
Journal: Ann Bot
Volume: 114
Pages: 1471-81
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Publication
16741748
First Author: Kanrar S
Title: Arabidopsis inflorescence architecture requires the activities of KNOX-BELL homeodomain heterodimers.
Year: 2006
Journal: Planta
Volume: 224
Pages: 1163-73
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Publication
25763694
First Author: Taniguchi M
Title: Identification of gravitropic response indicator genes in Arabidopsis inflorescence stems.
Year: 2014
Journal: Plant Signal Behav
Volume: 9
Pages: e29570
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Publication
31289115
First Author: Vanhaelewyn L
Title: Differential UVR8 Signal across the Stem Controls UV-B-Induced Inflorescence Phototropism.
Year: 2019
Journal: Plant Cell
Volume: 31
Pages: 2070-2088
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Gene
AT4G20370 | locus:2005521 | TSF | TWIN SISTER OF FT
Length: 2240  
Chromosome Location: Chr4: 11000771-11003010
Organism . Short Name: A. thaliana
TAIR Computational Description: PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11)
TAIR Curator Summary: Encodes a floral inducer that is a homolog of FT. Plants overexpressing this gene flower earlier than Col. Loss-of-function mutations flower later in short days. TSF and FT play overlapping roles in the promotion of flowering, with FT playing the dominant role and together playing an antagonistic role to TFL1 in the determination of inflorescence meristem identity. .TSF sequences show extensive variation in different accessions and may contribute to quantitative variation in flowering time in these accessions. TSF has a complex pattern of spatial expression; it is expressed mainly in phloem and expression is regulated by daylength and vernalization.
TAIR Short Description: PEBP (phosphatidylethanolamine-binding protein) family protein
TAIR Aliases: TSF
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Protein
IRK_ARATH | Q9LY03
Organism . Name: Arabidopsis thaliana
Length: 964  
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Gene
AT2G46685 | locus:1009023169 | MIR166A | microRNA166A
Length: 170  
Chromosome Location: Chr2: 19176108-19176277
Organism . Short Name: A. thaliana
TAIR Computational Description: microRNA ath-MIR166a precursor;(source:Araport11)
TAIR Curator Summary: Encodes a microRNA that targets several HD-ZIPIII family members including PHV, PHB, REV, ATHB-8, and ATHB-15. This particular miRNA is involved in the regulation of vascular development in inflorescence stems, primarily through the regulation of mRNA cleavage of the class III homeodomain-leucine zipper transcription factor ATHB15. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UCGGACCAGGCUUCAUUCCCC. Pri-mRNA coordinates for MIR166a (converted to TAIR10 based on PMID19304749): Chr2: 19175959-19177071 (forward), length: 1113 bp; exon coordinates: exon 1: 19175959 to 19176341, exon 2: 19176820 to 19177071; mature miRNA and miRNA* are located on exon 1.
TAIR Short Description: MIR166/MIR166A; miRNA
TAIR Aliases: MIR166, MIR166A
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Gene
AT3G33520 | locus:2102202 | ARP6 | actin-related protein 6
Length: 1933  
Chromosome Location: Chr3: 14093656-14095588
Organism . Short Name: A. thaliana
TAIR Computational Description: actin-related protein 6;(source:Araport11)
TAIR Curator Summary: Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature through incorporation of variant histone H2A.Z into chromatin.
TAIR Short Description: actin-related protein 6
TAIR Aliases: ARP6, ATARP6, ESD1, SUF3
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Publication
16676184
First Author: Guan CM
Title: Hormone-regulated inflorescence induction and TFL1 expression in Arabidopsis callus in vitro.
Year: 2006
Journal: Plant Cell Rep
Volume: 25
Pages: 1133-7
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Publication
25127215
First Author: Davière JM
Title: Class I TCP-DELLA interactions in inflorescence shoot apex determine plant height.
Year: 2014
Journal: Curr Biol
Volume: 24
Pages: 1923-8
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Publication
12324621
First Author: Shannon S
Title: A Mutation in the Arabidopsis TFL1 Gene Affects Inflorescence Meristem Development.
Year: 1991
Journal: Plant Cell
Volume: 3
Pages: 877-892
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