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Search results 301 to 400 out of 555 for Single Nucleotide Polymorphism

Organism restricted to A. thaliana (x)

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Organism: A. thaliana
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Type Details Score
Protein
A0A1P8BDP4_ARATH | A0A1P8BDP4
Organism . Name: Arabidopsis thaliana
Length: 363  
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Protein
A0A1P8BDS2_ARATH | A0A1P8BDS2
Organism . Name: Arabidopsis thaliana
Length: 380  
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Protein
A0A1P8BDV2_ARATH | A0A1P8BDV2
Organism . Name: Arabidopsis thaliana
Length: 512  
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Protein
A0A1P8BH73_ARATH | A0A1P8BH73
Organism . Name: Arabidopsis thaliana
Length: 250  
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Protein
A0A1P8BH78_ARATH | A0A1P8BH78
Organism . Name: Arabidopsis thaliana
Length: 258  
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Protein
A0A1R7T3I0_ARATH | A0A1R7T3I0
Organism . Name: Arabidopsis thaliana
Length: 489  
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Protein
A0A384L0K4_ARATH | A0A384L0K4
Organism . Name: Arabidopsis thaliana
Length: 382  
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Protein
A0A5S9XFU6_ARATH | A0A5S9XFU6
Organism . Name: Arabidopsis thaliana
Length: 154  
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Protein
A0A5S9XTA9_ARATH | A0A5S9XTA9
Organism . Name: Arabidopsis thaliana
Length: 1830  
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Protein
A0A5S9XTW4_ARATH | A0A5S9XTW4
Organism . Name: Arabidopsis thaliana
Length: 196  
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Protein
A0A654F5I4_ARATH | A0A654F5I4
Organism . Name: Arabidopsis thaliana
Length: 414  
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Protein
A0A654FDC0_ARATH | A0A654FDC0
Organism . Name: Arabidopsis thaliana
Length: 184  
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Protein
A0A654FF51_ARATH | A0A654FF51
Organism . Name: Arabidopsis thaliana
Length: 382  
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Protein
A0A654FQX1_ARATH | A0A654FQX1
Organism . Name: Arabidopsis thaliana
Length: 196  
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Protein
A0A654G6I9_ARATH | A0A654G6I9
Organism . Name: Arabidopsis thaliana
Length: 183  
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Protein
F4I0J2_ARATH | F4I0J2
Organism . Name: Arabidopsis thaliana
Length: 209  
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Protein
B3FXQ4_ARATH | B3FXQ4
Organism . Name: Arabidopsis thaliana
Length: 653  
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Protein
B9DG73_ARATH | B9DG73
Organism . Name: Arabidopsis thaliana
Length: 226  
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Gene
AT2G28050 | locus:2046218 | AT2G28050 | -
Length: 1783  
Chromosome Location: Chr2: 11937871-11939653
Organism . Short Name: A. thaliana
TAIR Computational Description: Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a relatively short regular p-class pentatricopeptide repeat protein comprising seven canonical p repeats and a single short s repeat that is necessary for the 5'-processing and stability of nad2 mRNA in mitochondria.
TAIR Short Description: Pentatricopeptide repeat (PPR) superfamily protein
TAIR Aliases: RPF7
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Gene
AT3G11040 | locus:2074598 | ENGase85B | Endo-beta-N-acetyglucosaminidase 85B
Length: 3546  
Chromosome Location: Chr3: 3459939-3463484
Organism . Short Name: A. thaliana
TAIR Computational Description: Glycosyl hydrolase family 85;(source:Araport11)
TAIR Curator Summary: Encodes a cytosolic beta-endo-N-acetyglucosaminidase (ENGase). ENGases N-glycans cleave the O-glycosidic linkage between the two GlcNAc residues of the N-glycan core structure and thus generate a protein with a single GlcNAc attached to asparagine.
TAIR Short Description: Glycosyl hydrolase family 85
TAIR Aliases: AtENGase85B, ENGase85B
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Gene
AT4G21600 | locus:2119612 | ENDO5 | endonuclease 5
Length: 2555  
Chromosome Location: Chr4: 11484981-11487535
Organism . Short Name: A. thaliana
TAIR Computational Description: endonuclease 5;(source:Araport11)
TAIR Curator Summary: Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches. It also has the ability to cleave indel types of mismatches (heteroduplexes with loops).
TAIR Short Description: endonuclease 5
TAIR Aliases: ENDO5
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Gene
AT5G05460 | locus:2153579 | ENGase85A | Endo-beta-N-acetyglucosaminidase 85A
Length: 3601  
Chromosome Location: Chr5: 1615507-1619107
Organism . Short Name: A. thaliana
TAIR Computational Description: Glycosyl hydrolase family 85;(source:Araport11)
TAIR Curator Summary: Encodes a cytosolic beta-endo-N-acetyglucosaminidase (ENGase). ENGases N-glycans cleave the O-glycosidic linkage between the two GlcNAc residues of the N-glycan core structure and thus generate a protein with a single GlcNAc attached to asparagine.
TAIR Short Description: Glycosyl hydrolase family 85
TAIR Aliases: AtENGase85A, ENGase85A
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Gene
AT1G67030 | locus:2019723 | ZFP6 | zinc finger protein 6
Length: 1111  
Chromosome Location: Chr1: 25016402-25017512
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger protein 6;(source:Araport11)
TAIR Curator Summary: Encodes a novel C2H2 zinc finger protein containing only a single zinc finger which plays a key role in regulating trichome development by integrating GA and cytokinin signaling. The mRNA is cell-to-cell mobile.
TAIR Short Description: zinc finger protein 6
TAIR Aliases: ZFP6
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Gene
AT2G41940 | locus:2064579 | ZFP8 | zinc finger protein 8
Length: 1274  
Chromosome Location: Chr2: 17507343-17508616
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger protein 8;(source:Araport11)
TAIR Curator Summary: Encodes a zinc finger protein containing only a single zinc finger. Together with GIS and GIS2 plays partially redundant and essential role in inflorescence trichome initiation and in its regulation by GA and cytokinins.
TAIR Short Description: zinc finger protein 8
TAIR Aliases: ZFP8
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Gene
AT1G63245 | locus:504956189 | CLE14 | CLAVATA3/ESR-RELATED 14
Length: 687  
Chromosome Location: Chr1: 23460198-23460884
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 14;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo.Involved in the regulation of ROS signaling during leaf senescence.
TAIR Short Description: CLAVATA3/ESR-RELATED 14
TAIR Aliases: CLE14
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Gene
AT2G36640 | locus:2040615 | ECP63 | embryonic cell protein 63
Length: 1790  
Chromosome Location: Chr2: 15356830-15358619
Organism . Short Name: A. thaliana
TAIR Computational Description: embryonic cell protein 63;(source:Araport11)
TAIR Curator Summary: Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.
TAIR Short Description: embryonic cell protein 63
TAIR Aliases: ATECP63, ECP63
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Gene
AT3G24225 | locus:504955740 | CLE19 | CLAVATA3/ESR-RELATED 19
Length: 850  
Chromosome Location: Chr3: 8768846-8769695
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 19;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo. Regulates root meristem size in a SCR and SHR-independent pathway.
TAIR Short Description: CLAVATA3/ESR-RELATED 19
TAIR Aliases: ATCLE19, CLE19, ESR19
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Gene
AT1G69680 | locus:2205070 | AT1G69680 | -
 
Length: 2187  
Chromosome Location: Chr1: 26204805-26206991
Organism . Short Name: A. thaliana
TAIR Computational Description: ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
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Gene
AT5G46020 | locus:2161403 | AT5G46020 | -
Length: 2104  
Chromosome Location: Chr5: 18662805-18664908
Organism . Short Name: A. thaliana
TAIR Computational Description: 28 kDa heat/acid-stable phosphoprotein-like protein;(source:Araport11)
TAIR Curator Summary: MUSE7 was identified in a forward genetic screen to identify snc1 enhancers using a mos4 snc1 background. muse7 mos4 snc1 plants are morphologiclly similar to snc1 plants with slightly twisted leaves. The triple mutant also shows PR gene activation and enhanced resistance to pathogens, like the snc1 single mutant. It is a single copy gene conserved in plants and metazoans.MUSE7 encodes an evolutionarily conserved putative kinase substrate of unknown function that affects the accumulation of NLR proteins.
TAIR Short Description: NULL
TAIR Aliases: MUSE7
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Gene
AT1G66040 | locus:2013800 | VIM4 | VARIANT IN METHYLATION 4
Length: 3021  
Chromosome Location: Chr1: 24583740-24586760
Organism . Short Name: A. thaliana
TAIR Computational Description: Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)
TAIR Curator Summary: predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH4/VIM4 cDNA through RT-PCR were unsuccessful and analysis of the expression of this gene is difficult since it shares 99% nucleotide identity with ORTH5/VIM2.
TAIR Short Description: Zinc finger (C3HC4-type RING finger) family protein
TAIR Aliases: ORTH4, VIM4
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Gene
AT5G54250 | locus:2162605 | CNGC4 | cyclic nucleotide-gated cation channel 4
Length: 5065  
Chromosome Location: Chr5: 22025035-22030099
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-gated cation channel 4;(source:Araport11)
TAIR Curator Summary: member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.
TAIR Short Description: cyclic nucleotide-gated cation channel 4
TAIR Aliases: ATCNGC4, CNGC4, DND2, HLM1
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Gene
AT3G49850 | locus:2097325 | TRB3 | telomere repeat binding factor 3
Length: 2005  
Chromosome Location: Chr3: 18488993-18490997
Organism . Short Name: A. thaliana
TAIR Computational Description: telomere repeat binding factor 3;(source:Araport11)
TAIR Curator Summary: Encodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain.
TAIR Short Description: telomere repeat binding factor 3
TAIR Aliases: ATTRB3, TBP2, TRB3
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Gene
AT3G59280 | locus:2081152 | TXR1 | THAXTOMIN A RESISTANT 1
Length: 2310  
Chromosome Location: Chr3: 21908429-21910738
Organism . Short Name: A. thaliana
TAIR Computational Description: Protein Transporter, Pam16;(source:Araport11)
TAIR Curator Summary: Encodes the ortholog of yeast PAM16, part of the mitochondrial inner membrane protein import motor. Single mutant plants exhibit a smaller size and enhanced resistance against virulent pathogens. They also display elevated reactive oxygen species (ROS) accumulation.
TAIR Short Description: Protein Transporter, Pam16
TAIR Aliases: AtPAM16, MUSE5, PAM16, TXR1
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Gene
AT4G25120 | locus:2117303 | SRS2 | SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2
Length: 7957  
Chromosome Location: Chr4: 12890545-12898501
Organism . Short Name: A. thaliana
TAIR Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3’- to 5’-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.
TAIR Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR Aliases: ATSRS2, SRS2
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Gene
AT4G21590 | locus:2119687 | ENDO3 | endonuclease 3
Length: 2445  
Chromosome Location: Chr4: 11480321-11482765
Organism . Short Name: A. thaliana
TAIR Computational Description: endonuclease 3;(source:Araport11)
TAIR Curator Summary: Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.
TAIR Short Description: endonuclease 3
TAIR Aliases: ENDO3
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Gene
AT4G16950 | locus:2130270 | RPP5 | RECOGNITION OF PERONOSPORA PARASITICA 5
Length: 6523  
Chromosome Location: Chr4: 9538233-9544755
Organism . Short Name: A. thaliana
TAIR Computational Description: Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)
TAIR Curator Summary: Contains a putative nucleotide binding site and leucine-rich repeats. Similar to the plant resistance genes N and L6, and to the toll and interleukin-1 receptors. Confers resistance to Peronospora parasitica.Redundant function together with SIKIC1 and 3 in SNC1-mediated autoimmunity. Protein levels controlled by MUSE1 and MUSE2.
TAIR Short Description: Disease resistance protein (TIR-NBS-LRR class) family
TAIR Aliases: RPP5, SIKIC2
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Gene
AT5G23580 | locus:2171726 | CDPK9 | calmodulin-like domain protein kinase 9
Length: 2418  
Chromosome Location: Chr5: 7950202-7952619
Organism . Short Name: A. thaliana
TAIR Computational Description: calmodulin-like domain protein kinase 9;(source:Araport11)
TAIR Curator Summary: Member of a unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus; recombinant protein is fully active and induced by Ca2+
TAIR Short Description: calmodulin-like domain protein kinase 9
TAIR Aliases: ATCDPK9, ATCPK12, CDPK9, CPK12
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Protein
Q9LVC4_ARATH | Q9LVC4
Organism . Name: Arabidopsis thaliana
Length: 256  
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Protein
A0A654GC16_ARATH | A0A654GC16
Organism . Name: Arabidopsis thaliana
Length: 238  
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Gene
AT1G67740 | locus:2008555 | PSBY | photosystem II BY
Length: 1219  
Chromosome Location: Chr1: 25394031-25395249
Organism . Short Name: A. thaliana
TAIR Computational Description: photosystem II BY;(source:Araport11)
TAIR Curator Summary: PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese. Important for the redox control of cytochrome b559.
TAIR Short Description: photosystem II BY
TAIR Aliases: PSBY, YCF32
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Gene
AT5G67030 | locus:2158083 | ABA1 | ABA DEFICIENT 1
Length: 3934  
Chromosome Location: Chr5: 26753469-26757402
Organism . Short Name: A. thaliana
TAIR Computational Description: zeaxanthin epoxidase (ZEP) (ABA1);(source:Araport11)
TAIR Curator Summary: Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.
TAIR Short Description: zeaxanthin epoxidase (ZEP) (ABA1)
TAIR Aliases: ABA1, ATABA1, ATZEP, IBS3, LOS6, NPQ2, ZEP
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Gene
AT3G09350 | locus:2083559 | Fes1A | Fes1A
Length: 2363  
Chromosome Location: Chr3: 2870970-2873332
Organism . Short Name: A. thaliana
TAIR Computational Description: Fes1A;(source:Araport11)
TAIR Curator Summary: Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.
TAIR Short Description: Fes1A
TAIR Aliases: Fes1A
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Gene
AT2G01820 | locus:2059703 | AT2G01820 | -
Length: 3572  
Chromosome Location: Chr2: 357353-360924
Organism . Short Name: A. thaliana
TAIR Computational Description: Leucine-rich repeat protein kinase family protein;(source:Araport11)
TAIR Curator Summary: Transmembrane kinase (TMK), member of the plant receptor-like kinase (RLK) family. TMKs are characterized by an extracellular leucine-rich-repeat (LRR) domain, a single transmembrane region and a cytoplasmic kinase domain. TMKs have been shown to act as critical modulators of cell expansion and cell proliferation.
TAIR Short Description: Leucine-rich repeat protein kinase family protein
TAIR Aliases: TMK3
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Gene
AT5G06370 | locus:2164260 | AT5G06370 | -
Length: 1608  
Chromosome Location: Chr5: 1947005-1948612
Organism . Short Name: A. thaliana
TAIR Computational Description: NC domain-containing protein-like protein;(source:Araport11)
TAIR Curator Summary: PSE1 is a single copy gene that is induced in response to lead and confers increased tolerance to lead when overexpressed. It is localized to the cytoplasm. The protein has an NC domain. PSE1 appears to regulate tolerance via a GSH dependent phytochelatin synthesis pathway.
TAIR Short Description: NC domain-containing protein-related
TAIR Aliases: PSE1
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Gene
AT1G68290 | locus:2199297 | ENDO2 | endonuclease 2
Length: 1768  
Chromosome Location: Chr1: 25596671-25598438
Organism . Short Name: A. thaliana
TAIR Computational Description: endonuclease 2;(source:Araport11)
TAIR Curator Summary: Encodes an endonuclease ENDO2. ENDO2 purified from transgenic Arabidopsis digests RNA, ssDNA, and dsDNA, with a substrate preference for ssDNA and RNA. ENDO2 produced and purified from Nicotiana benthamiana expression showed no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, in vitro.
TAIR Short Description: endonuclease 2
TAIR Aliases: AtBFN2, ENDO2
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Gene
AT1G71030 | locus:2026306 | MYBL2 | MYB-like 2
Length: 1481  
Chromosome Location: Chr1: 26795052-26796532
Organism . Short Name: A. thaliana
TAIR Computational Description: MYB-like 2;(source:Araport11)
TAIR Curator Summary: Encodes a putative myb family transcription factor. In contrast to most other myb-like proteins its myb domain consists of a single repeat. A proline-rich region potentially involved in transactivation is found in the C-terminal part of the protein. Its transcript accumulates mainly in leaves.
TAIR Short Description: MYB-like 2
TAIR Aliases: ATMYBL2, MYBL2
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Gene
AT5G63440 | locus:2167361 | AT5G63440 | -
Length: 2205  
Chromosome Location: Chr5: 25406252-25408456
Organism . Short Name: A. thaliana
TAIR Computational Description: hypothetical protein (DUF167);(source:Araport11)
TAIR Curator Summary: Encodes a single copy protein in Arabidopsis containing a DUF167 domain that is conserved in eukaryotes. Genetically CSU suppresses mutations in COP1. In vitro, it interacts with CACTIN and in vivo with CCA1. CSU4 promotes photomorphogenesis via negative regulation of CCA1 and PIF4 expression.
TAIR Short Description: Protein of unknown function (DUF167)
TAIR Aliases: CSU4
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Gene
AT2G19020 | locus:2044435 | RALFL10 | ralf-like 10
Length: 351  
Chromosome Location: Chr2: 8246160-8246510
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 10;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 10
TAIR Aliases: RALFL10
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Gene
AT2G19030 | locus:2059046 | RALFL11 | ralf-like 11
Length: 456  
Chromosome Location: Chr2: 8247726-8248181
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 11;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 11
TAIR Aliases: RALFL11
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Gene
AT2G19040 | locus:2059068 | RALFL12 | RALF-like 12
Length: 332  
Chromosome Location: Chr2: 8249877-8250208
Organism . Short Name: A. thaliana
TAIR Computational Description: RALF-like 12;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: RALF-like 12
TAIR Aliases: RALFL12
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Gene
AT2G19045 | locus:4010713632 | RALFL13 | RALF-like 13
Length: 460  
Chromosome Location: Chr2: 8251612-8252071
Organism . Short Name: A. thaliana
TAIR Computational Description: RALF-like 13;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: RALF-like 13
TAIR Aliases: RALFL13
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Gene
AT2G20660 | locus:2046031 | RALFL14 | ralf-like 14
Length: 306  
Chromosome Location: Chr2: 8909467-8909772
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 14;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 14
TAIR Aliases: RALFL14
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Gene
AT2G33130 | locus:2046580 | RALFL18 | ralf-like 18
Length: 676  
Chromosome Location: Chr2: 14046388-14047063
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 18;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 18
TAIR Aliases: RALF18, RALFL18
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Gene
AT2G33775 | locus:504955964 | RALFL19 | ralf-like 19
Length: 991  
Chromosome Location: Chr2: 14288323-14289313
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 19;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 19
TAIR Aliases: RALF19, RALFL19
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Gene
AT3G05490 | locus:2079787 | RALFL22 | ralf-like 22
Length: 1933  
Chromosome Location: Chr3: 1591115-1593047
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 22;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 22
TAIR Aliases: RALFL22
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Gene
AT3G23805 | locus:505006366 | RALFL24 | ralf-like 24
Length: 913  
Chromosome Location: Chr3: 8586359-8587271
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 24;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 24
TAIR Aliases: RALFL24
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Gene
AT3G25165 | locus:505006372 | RALFL25 | ralf-like 25
Length: 599  
Chromosome Location: Chr3: 9163340-9163938
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 25;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 25
TAIR Aliases: RALFL25
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Gene
AT3G25170 | locus:2090260 | RALFL26 | ralf-like 26
Length: 1154  
Chromosome Location: Chr3: 9165667-9166820
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 26;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 26
TAIR Aliases: RALFL26
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Gene
AT3G29780 | locus:2100582 | RALFL27 | ralf-like 27
Length: 603  
Chromosome Location: Chr3: 11671637-11672239
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 27;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 27
TAIR Aliases: RALFL27
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Gene
AT4G11510 | locus:2123091 | RALFL28 | ralf-like 28
Length: 459  
Chromosome Location: Chr4: 6983911-6984369
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 28;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 28
TAIR Aliases: RALFL28
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Gene
AT4G13950 | locus:2129261 | RALFL31 | ralf-like 31
Length: 752  
Chromosome Location: Chr4: 8058072-8058823
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 31;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 31
TAIR Aliases: RALFL31
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Gene
AT4G14010 | locus:2129341 | RALFL32 | ralf-like 32
Length: 866  
Chromosome Location: Chr4: 8092687-8093552
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 32;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 32
TAIR Aliases: RALFL32
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Gene
AT1G16710 | locus:2015676 | HAC12 | histone acetyltransferase of the CBP family 12
Length: 8821  
Chromosome Location: Chr1: 5713794-5722614
Organism . Short Name: A. thaliana
TAIR Computational Description: histone acetyltransferase of the CBP family 12;(source:Araport11)
TAIR Curator Summary: Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.
TAIR Short Description: histone acetyltransferase of the CBP family 12
TAIR Aliases: HAC12
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Gene
AT1G22260 | locus:2015031 | ZYP1a | -
Length: 5634  
Chromosome Location: Chr1: 7859630-7865263
Organism . Short Name: A. thaliana
TAIR Computational Description: Myosin heavy chain-related protein;(source:Araport11)
TAIR Curator Summary: One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.
TAIR Short Description: Myosin heavy chain-related protein
TAIR Aliases: AtZYP1a, ZYP1, ZYP1a
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Gene
AT1G22275 | locus:505006139 | ZYP1b | -
Length: 5649  
Chromosome Location: Chr1: 7867067-7872715
Organism . Short Name: A. thaliana
TAIR Computational Description: Myosin heavy chain-related protein;(source:Araport11)
TAIR Curator Summary: One of two nearly identical proteins (ZYP1a) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.
TAIR Short Description: Myosin heavy chain-related protein
TAIR Aliases: ZYP1, ZYP1b
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Gene
AT1G61563 | locus:505006195 | RALFL8 | ralf-like 8
Length: 528  
Chromosome Location: Chr1: 22714921-22715448
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 8;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 8
TAIR Aliases: AtRALFL8, RALF8, RALFL8
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Gene
AT1G61566 | locus:505006196 | RALFL9 | ralf-like 9
Length: 551  
Chromosome Location: Chr1: 22717060-22717610
Organism . Short Name: A. thaliana
TAIR Computational Description: ralf-like 9;(source:Araport11)
TAIR Curator Summary: Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: ralf-like 9
TAIR Aliases: RALFL9
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Gene
AT1G67775 | locus:1009023120 | CLE8 | CLAVATA3/ESR-RELATED 8
Length: 385  
Chromosome Location: Chr1: 25411312-25411696
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 8;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. It positively regulates expression of the transcription factor gene WUSCHEL-LIKE HOMEOBOX8 (WOX8), and together CLE8 and WOX8 form a signaling module that promotes seed growth and overall seed size.
TAIR Short Description: CLAVATA3/ESR-RELATED 8
TAIR Aliases: CLE8
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Gene
AT4G25540 | locus:2131829 | MSH3 | homolog of DNA mismatch repair protein MSH3
Length: 5808  
Chromosome Location: Chr4: 13042455-13048262
Organism . Short Name: A. thaliana
TAIR Computational Description: homolog of DNA mismatch repair protein MSH3;(source:Araport11)
TAIR Curator Summary: encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).
TAIR Short Description: homolog of DNA mismatch repair protein MSH3
TAIR Aliases: ATMSH3, MSH3
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Gene
AT1G12220 | locus:2201996 | RPS5 | RESISTANT TO P. SYRINGAE 5
Length: 3683  
Chromosome Location: Chr1: 4144257-4147939
Organism . Short Name: A. thaliana
TAIR Computational Description: Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)
TAIR Curator Summary: Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB.
TAIR Short Description: Disease resistance protein (CC-NBS-LRR class) family
TAIR Aliases: RPS5
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Gene
AT5G14800 | locus:2185435 | P5CR | pyrroline-5- carboxylate (P5C) reductase
Length: 2037  
Chromosome Location: Chr5: 4785960-4787996
Organism . Short Name: A. thaliana
TAIR Computational Description: pyrroline-5- carboxylate (P5C) reductase;(source:Araport11)
TAIR Curator Summary: Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.
TAIR Short Description: pyrroline-5- carboxylate (P5C) reductase
TAIR Aliases: AT-P5C1, AT-P5R, EMB2772, P5CR
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Gene
AT1G13710 | locus:2023848 | CYP78A5 | cytochrome P450, family 78, subfamily A, polypeptide 5
Length: 2038  
Chromosome Location: Chr1: 4702657-4704694
Organism . Short Name: A. thaliana
TAIR Computational Description: cytochrome P450, family 78, subfamily A, polypeptide 5;(source:Araport11)
TAIR Curator Summary: Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth. In ovules it is required for megagametogenesis, maternal control of seed size and restricting megaspore mother cell fate to a single cell.
TAIR Short Description: cytochrome P450, family 78, subfamily A, polypeptide 5
TAIR Aliases: CYP78A5, KLU
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Gene
AT1G07050 | locus:2007482 | AT1G07050 | -
Length: 1687  
Chromosome Location: Chr1: 2163575-2165261
Organism . Short Name: A. thaliana
TAIR Computational Description: CCT motif family protein;(source:Araport11)
TAIR Curator Summary: FITNESS encodes a protein with a single CCT domain and belongs to the CCT motif family genes (CMF). FITNESS acts upstream JUB1 thereby controlling H2O2 levels. FITNESS has a role in cellular redox homeostasis controlling H2O2 levels, due to changes in enzymes, metabolites and transcripts related to ROS detoxification.
TAIR Short Description: CCT motif family protein
TAIR Aliases: FITNESS
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Gene
AT5G16710 | locus:2149015 | DHAR3 | dehydroascorbate reductase 1
Length: 1926  
Chromosome Location: Chr5: 5483260-5485185
Organism . Short Name: A. thaliana
TAIR Computational Description: dehydroascorbate reductase 1;(source:Araport11)
TAIR Curator Summary: DHAR3 protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.Encodes 30-40% of extractable leaf GSH-dependent DHAR activity. Single knockout mutants show unaltered ascorbate and glutathione status in optimal and oxidative stress conditions.Makes a minor contribution to glutathione oxidation in response to increased intracellular hydrogen peroxide (catalase deficiency) (PMID:28381499).
TAIR Short Description: dehydroascorbate reductase 1
TAIR Aliases: DHAR3
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Gene
AT5G57345 | locus:505006695 | AT5G57345 | -
Length: 1459  
Chromosome Location: Chr5: 23229291-23230749
Organism . Short Name: A. thaliana
TAIR Computational Description: transmembrane protein;(source:Araport11)
TAIR Curator Summary: OXR is a single copy gene in Arabidopsis. It is localized to the ER. It is expressed throughout the plant and expression is induced in response to abiotic stress. While the function of OXR is unknown, overexpression results in increased abiotic stress tolerance and increased ascorbic acid content.
TAIR Short Description: NULL
TAIR Aliases: AtOxR
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Protein
F4I5M8_ARATH | F4I5M8
Organism . Name: Arabidopsis thaliana
Length: 753  
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Protein
Q9LIC9_ARATH | Q9LIC9
Organism . Name: Arabidopsis thaliana
Length: 753  
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Protein
F4IDG2_ARATH | F4IDG2
Organism . Name: Arabidopsis thaliana
Length: 754  
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Protein
F4IDG3_ARATH | F4IDG3
Organism . Name: Arabidopsis thaliana
Length: 680  
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Protein
F4IJR9_ARATH | F4IJR9
Organism . Name: Arabidopsis thaliana
Length: 239  
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Protein
F4IJS0_ARATH | F4IJS0
Organism . Name: Arabidopsis thaliana
Length: 227  
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Protein
F4IK85_ARATH | F4IK85
Organism . Name: Arabidopsis thaliana
Length: 700  
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Protein
F4IWM0_ARATH | F4IWM0
Organism . Name: Arabidopsis thaliana
Length: 818  
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Protein
F4J2W0_ARATH | F4J2W0
Organism . Name: Arabidopsis thaliana
Length: 158  
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Protein
F4JZT9_ARATH | F4JZT9
Organism . Name: Arabidopsis thaliana
Length: 731  
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Protein
Q9M999_ARATH | Q9M999
Organism . Name: Arabidopsis thaliana
Length: 756  
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Protein
A0A1I9LNS7_ARATH | A0A1I9LNS7
Organism . Name: Arabidopsis thaliana
Length: 736  
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Protein
A0A1I9LNS8_ARATH | A0A1I9LNS8
Organism . Name: Arabidopsis thaliana
Length: 762  
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Protein
A0A1P8AMZ9_ARATH | A0A1P8AMZ9
Organism . Name: Arabidopsis thaliana
Length: 751  
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Protein
A0A1P8AP30_ARATH | A0A1P8AP30
Organism . Name: Arabidopsis thaliana
Length: 716  
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Protein
A0A1P8AW87_ARATH | A0A1P8AW87
Organism . Name: Arabidopsis thaliana
Length: 762  
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Protein
A0A1P8B5B9_ARATH | A0A1P8B5B9
Organism . Name: Arabidopsis thaliana
Length: 665  
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Protein
A0A1P8BC68_ARATH | A0A1P8BC68
Organism . Name: Arabidopsis thaliana
Length: 616  
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Protein
F4I4J4_ARATH | F4I4J4
Organism . Name: Arabidopsis thaliana
Length: 758  
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Gene
AT2G46920 | locus:2041444 | POL | poltergeist
Length: 3928  
Chromosome Location: Chr2: 19277884-19281811
Organism . Short Name: A. thaliana
TAIR Computational Description: Protein phosphatase 2C family protein;(source:Araport11)
TAIR Curator Summary: Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.
TAIR Short Description: Protein phosphatase 2C family protein
TAIR Aliases: POL
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Gene
AT4G20850 | locus:2133039 | TPP2 | tripeptidyl peptidase ii
Length: 9351  
Chromosome Location: Chr4: 11160721-11170071
Organism . Short Name: A. thaliana
TAIR Computational Description: tripeptidyl peptidase ii;(source:Araport11)
TAIR Curator Summary: Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.
TAIR Short Description: tripeptidyl peptidase ii
TAIR Aliases: TPP2
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Gene
AT4G16340 | locus:2130484 | SPK1 | SPIKE1
Length: 13445  
Chromosome Location: Chr4: 9228185-9241629
Organism . Short Name: A. thaliana
TAIR Computational Description: guanyl-nucleotide exchange factors;(source:Araport11)
TAIR Curator Summary: Encodes SPIKE1 (SPK1), the lone DOCK family guanine nucleotide exchange factor (GEF) in Arabidopsis. SPK1 is a peripheral membrane protein that accumulates at, and promotes the formation of, a specialized domain of the endoplasmic reticulum (ER) termed the ER exit site (ERES). SPK1 promotes polarized growth and cell-cell adhesion in the leaf epidermis. Mutant has seedling lethal; cotyledon, leaf-shape, trichome defects.
TAIR Short Description: guanyl-nucleotide exchange factors;GTPase binding;GTP binding
TAIR Aliases: SPK1
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Gene
AT2G21480 | locus:2050080 | AT2G21480 | -
Length: 2978  
Chromosome Location: Chr2: 9202494-9205471
Organism . Short Name: A. thaliana
TAIR Computational Description: Malectin/receptor-like protein kinase family protein;(source:Araport11)
TAIR Curator Summary: BUSP2 plays a smaller role than BUSP1 in pollen tube growth. bups1/2 double mutants have reduced feritlity due to premature rupture of pollen tubes before they reach the ovule but single busp2 mutants are fertile. BUSP2 interacts with RALF4/19 peptide ligands and ANX1/2 receptors. BUPS/ANX signaling may regulate and promote pollen tube growth.
TAIR Short Description: Malectin/receptor-like protein kinase family protein
TAIR Aliases: BUPS2
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Gene
AT2G32835 | locus:4010713670 | RALFL16 | RALF-like 16
Length: 288  
Chromosome Location: Chr2: 13931166-13931453
Organism . Short Name: A. thaliana
TAIR Computational Description: RALF-like 16;(source:Araport11)
TAIR Curator Summary: Rapid alkalinization factor (RALF) family protein. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: RALF-like 16
TAIR Aliases: RALF16, RALFL16
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Gene
AT2G34825 | locus:4010713678 | RALFL20 | RALF-like 20
Length: 537  
Chromosome Location: Chr2: 14691376-14691912
Organism . Short Name: A. thaliana
TAIR Computational Description: RALF-like 20;(source:Araport11)
TAIR Curator Summary: Rapid alkalinization factor (RALF) family protein. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
TAIR Short Description: RALF-like 20
TAIR Aliases: RALFL20
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