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Search results 101 to 200 out of 6293 for Single Nucleotide Polymorphism

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Type Details Score
Gene
AT5G02280 | locus:2180117 | AT5G02280 | -
Length: 988  
Chromosome Location: Chr5: 469298-470285
Organism . Short Name: A. thaliana
TAIR Computational Description: SNARE-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: SNARE-like superfamily protein
TAIR Aliases: TRAPPC4
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Gene
AT3G17700 | locus:2090572 | CNBT1 | cyclic nucleotide-binding transporter 1
Length: 3862  
Chromosome Location: Chr3: 6048814-6052675
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-binding transporter 1;(source:Araport11)
TAIR Curator Summary: cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. The mRNA is cell-to-cell mobile.
TAIR Short Description: cyclic nucleotide-binding transporter 1
TAIR Aliases: ATCNGC20, CNBT1, CNGC20
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Gene
AT1G80500 | locus:2198983 | AT1G80500 | -
Length: 2224  
Chromosome Location: Chr1: 30270445-30272668
Organism . Short Name: A. thaliana
TAIR Computational Description: SNARE-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: SNARE-like superfamily protein
TAIR Aliases: TRAPPC2
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Gene
AT5G16280 | locus:2181387 | AT5G16280 | -
Length: 8562  
Chromosome Location: Chr5: 5323133-5331694
Organism . Short Name: A. thaliana
TAIR Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Aliases: TRAPPC8, TRS85
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Gene
AT5G54750 | locus:2160115 | AT5G54750 | -
Length: 2244  
Chromosome Location: Chr5: 22241478-22243721
Organism . Short Name: A. thaliana
TAIR Computational Description: Transport protein particle (TRAPP) component;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: Transport protein particle (TRAPP) component
TAIR Aliases: TRAPPC3
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Gene
AT5G14680 | locus:2222687 | AT5G14680 | -
 
Length: 2390  
Chromosome Location: Chr5: 4730836-4733225
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT1G01960 | locus:2025502 | EDA10 | embryo sac development arrest 10
Length: 7325  
Chromosome Location: Chr1: 330588-337912
Organism . Short Name: A. thaliana
TAIR Computational Description: SEC7-like guanine nucleotide exchange family protein;(source:Araport11)
TAIR Curator Summary: Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking.
TAIR Short Description: SEC7-like guanine nucleotide exchange family protein
TAIR Aliases: BIG3, EDA10
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Gene
AT1G09740 | locus:2024291 | AT1G09740 | -
 
Length: 1987  
Chromosome Location: Chr1: 3154390-3156376
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT1G11360 | locus:2200036 | AT1G11360 | -
 
Length: 1983  
Chromosome Location: Chr1: 3821106-3823088
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT1G12400 | locus:2034685 | AT1G12400 | -
 
Length: 1097  
Chromosome Location: Chr1: 4221779-4222875
Organism . Short Name: A. thaliana
TAIR Computational Description: Nucleotide excision repair, TFIIH, subunit TTDA;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Nucleotide excision repair, TFIIH, subunit TTDA
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Gene
AT2G21080 | locus:2047032 | AT2G21080 | -
 
Length: 1691  
Chromosome Location: Chr2: 9043699-9045389
Organism . Short Name: A. thaliana
TAIR Computational Description: Ras guanine nucleotide exchange factor K;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: NULL
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Gene
AT2G21620 | locus:2049334 | RD2 | -
Length: 1787  
Chromosome Location: Chr2: 9248525-9250311
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes gene that is induced in response to desiccation; mRNA expression is seen 10 and 24 hrs after start of desiccation treatment.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: RD2
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Gene
AT2G44100 | locus:2051839 | GDI1 | guanosine nucleotide diphosphate dissociation inhibitor 1
Length: 3540  
Chromosome Location: Chr2: 18241469-18245008
Organism . Short Name: A. thaliana
TAIR Computational Description: guanosine nucleotide diphosphate dissociation inhibitor 1;(source:Araport11)
TAIR Curator Summary: GDP dissociation inhibitor involved in vesicular membrane traffic
TAIR Short Description: guanosine nucleotide diphosphate dissociation inhibitor 1
TAIR Aliases: AT-GDI1, ATGDI1, GDI1
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Gene
AT2G47710 | locus:2043273 | AT2G47710 | -
 
Length: 1403  
Chromosome Location: Chr2: 19554724-19556126
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT3G01520 | locus:2084153 | AT3G01520 | -
 
Length: 1912  
Chromosome Location: Chr3: 208250-210161
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a universal stress protein (USP)-like protein that has been crystallized in complex with AMP, suggesting that it belongs to the ATP-binding USP subfamily. The mRNA is cell-to-cell mobile.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT3G03270 | locus:2097755 | AT3G03270 | -
Length: 2366  
Chromosome Location: Chr3: 761004-763369
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: HRU1 is a hypoxia induced universal stress protein. It exists as two splice variants with AT3G03270.2 , which contains a putative dimerization domain, the predominant transcript found under anoxia. It is induced by RAP2.12. Subcellular localization is dynamic; under anoxia the localization of HRU1 shifts from cytoplasm to the plasma membrane.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: HRU1
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Gene
AT3G03290 | locus:2097735 | AT3G03290 | -
 
Length: 1179  
Chromosome Location: Chr3: 766685-767863
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT4G13450 | locus:2142130 | AT4G13450 | -
 
Length: 1257  
Chromosome Location: Chr4: 7814888-7816144
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT4G18930 | locus:2117099 | AT4G18930 | -
 
Length: 1613  
Chromosome Location: Chr4: 10370433-10372045
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein
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Gene
AT4G18940 | locus:2117114 | AT4G18940 | -
 
Length: 1238  
Chromosome Location: Chr4: 10372658-10373895
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein
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Gene
AT4G27320 | locus:2131719 | PHOS34 | -
Length: 2530  
Chromosome Location: Chr4: 13678417-13680946
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Contains a universal stress protein domain. Protein is phosphorylated in response to Phytophthora infestans zoospores and xylanase.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: ATPHOS34, PHOS34, USP21
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Gene
AT4G35380 | locus:2122143 | AT4G35380 | -
Length: 6356  
Chromosome Location: Chr4: 16819792-16826147
Organism . Short Name: A. thaliana
TAIR Computational Description: SEC7-like guanine nucleotide exchange family protein;(source:Araport11)
TAIR Curator Summary: Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking.
TAIR Short Description: SEC7-like guanine nucleotide exchange family protein
TAIR Aliases: BIG4
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Gene
AT4G35910 | locus:2125359 | AT4G35910 | -
Length: 3255  
Chromosome Location: Chr4: 17008388-17011642
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a cytoplasmic thiouridylase that is essential for tRNA thiolation. Its activity appears to be important in root development.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: CTU2
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Gene
AT4G38200 | locus:2120923 | AT4G38200 | -
Length: 7527  
Chromosome Location: Chr4: 17915206-17922732
Organism . Short Name: A. thaliana
TAIR Computational Description: SEC7-like guanine nucleotide exchange family protein;(source:Araport11)
TAIR Curator Summary: Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking.
TAIR Short Description: SEC7-like guanine nucleotide exchange family protein
TAIR Aliases: BIG1
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Gene
AT5G05940 | locus:2153684 | ROPGEF5 | ROP (rho of plants) guanine nucleotide exchange factor 5
Length: 2756  
Chromosome Location: Chr5: 1785845-1788600
Organism . Short Name: A. thaliana
TAIR Computational Description: ROP guanine nucleotide exchange factor 5;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: ROP guanine nucleotide exchange factor 5
TAIR Aliases: ATROPGEF5, ROPGEF5
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Gene
AT1G44760 | locus:2194824 | AT1G44760 | -
 
Length: 1967  
Chromosome Location: Chr1: 16896679-16898645
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT1G48960 | locus:2028516 | AT1G48960 | -
 
Length: 1276  
Chromosome Location: Chr1: 18112458-18113733
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT1G52240 | locus:2018169 | ROPGEF11 | ROP (rho of plants) guanine nucleotide exchange factor 11
Length: 2575  
Chromosome Location: Chr1: 19455495-19458069
Organism . Short Name: A. thaliana
TAIR Computational Description: rop guanine nucleotide exchange factor-like protein;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .
TAIR Short Description: RHO guanyl-nucleotide exchange factor 11
TAIR Aliases: ATROPGEF11, PIRF1, ROPGEF11
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Gene
AT1G62886 | locus:4515102707 | AT1G62886 | -
 
Length: 298  
Chromosome Location: Chr1: 23294413-23294710
Organism . Short Name: A. thaliana
TAIR Computational Description: Nucleotide excision repair, TFIIH, subunit TTDA;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Nucleotide excision repair, TFIIH, subunit TTDA
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Gene
AT1G68300 | locus:2199282 | AT1G68300 | -
 
Length: 1020  
Chromosome Location: Chr1: 25598331-25599350
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT1G69080 | locus:2033245 | AT1G69080 | -
 
Length: 1591  
Chromosome Location: Chr1: 25971915-25973505
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT3G17020 | locus:2086102 | AT3G17020 | -
 
Length: 1790  
Chromosome Location: Chr3: 5802493-5804282
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT3G24560 | locus:2091732 | RSY3 | RASPBERRY 3
Length: 2847  
Chromosome Location: Chr3: 8963770-8966616
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: novel gene involved in embryogenesis
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: RSY3
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Gene
AT3G25930 | locus:2092170 | AT3G25930 | -
 
Length: 1538  
Chromosome Location: Chr3: 9492765-9494302
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT3G28140 | locus:2091378 | AT3G28140 | -
 
Length: 1132  
Chromosome Location: Chr3: 10470392-10471523
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein
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Gene
AT3G53990 | locus:2084525 | AT3G53990 | -
Length: 1895  
Chromosome Location: Chr3: 19989292-19991186
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes universal stress protein (USP). Functions as a molecular chaperone under heat shock and oxidative stress conditions. Chaperone activity and assembly into complexes is redox regulated.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: AtUSP, USP17
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Gene
AT3G58450 | locus:2076381 | AT3G58450 | -
Length: 1173  
Chromosome Location: Chr3: 21621994-21623166
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: USP domain containing protein, member of the universal stress protein family, regulated by ABA and possibly regulated by the ABA-dependent transcription factor AREB/ABF. Involved in the regulation of seed germination.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: GRUSP, USP
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Gene
AT2G03720 | locus:2044274 | MRH6 | morphogenesis of root hair 6
Length: 1260  
Chromosome Location: Chr2: 1132120-1133379
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Involved in root hair development
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: MRH6
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Gene
AT3G60860 | locus:2101906 | AT3G60860 | -
Length: 7539  
Chromosome Location: Chr3: 22484397-22491935
Organism . Short Name: A. thaliana
TAIR Computational Description: SEC7-like guanine nucleotide exchange family protein;(source:Araport11)
TAIR Curator Summary: Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking. The mRNA is cell-to-cell mobile.
TAIR Short Description: SEC7-like guanine nucleotide exchange family protein
TAIR Aliases: BIG2
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Gene
AT3G62550 | locus:2096089 | AT3G62550 | -
 
Length: 1544  
Chromosome Location: Chr3: 23135630-23137173
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT3G11930 | locus:2081531 | AT3G11930 | -
 
Length: 1575  
Chromosome Location: Chr3: 3776177-3777751
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT5G17390 | locus:2178920 | AT5G17390 | -
 
Length: 1216  
Chromosome Location: Chr5: 5727473-5728688
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT5G19560 | locus:2180781 | ROPGEF10 | ROP (rho of plants) guanine nucleotide exchange factor 10
Length: 3597  
Chromosome Location: Chr5: 6602910-6606506
Organism . Short Name: A. thaliana
TAIR Computational Description: ROP uanine nucleotide exchange factor 10;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: ROP uanine nucleotide exchange factor 10
TAIR Aliases: ATROPGEF10, GEF10, ROPGEF10
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Gene
AT5G20310 | locus:2149244 | AT5G20310 | -
 
Length: 1593  
Chromosome Location: Chr5: 6857553-6859145
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT5G40190 | locus:2173792 | AT5G40190 | -
 
Length: 1002  
Chromosome Location: Chr5: 16069043-16070044
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11)
TAIR Curator Summary: Identified in a screen for calmodulin-binding proteins obtained from an auxin treated cDNA library.
TAIR Short Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein
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Gene
AT5G47740 | locus:2160907 | AT5G47740 | -
 
Length: 1265  
Chromosome Location: Chr5: 19338511-19339775
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
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Gene
AT5G54430 | locus:2147319 | PHOS32 | -
Length: 2932  
Chromosome Location: Chr5: 22096920-22099851
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Contains a universal stress protein domain. Protein is phosphorylated in response to Phytophthora infestans zoospores and xylanase.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: ATPHOS32, PHOS32
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Gene
AT1G11190 | locus:2202114 | BFN1 | bifunctional nuclease i
Length: 2715  
Chromosome Location: Chr1: 3750066-3752780
Organism . Short Name: A. thaliana
TAIR Computational Description: bifunctional nuclease i;(source:Araport11)
TAIR Curator Summary: Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).
TAIR Short Description: bifunctional nuclease i
TAIR Aliases: BFN1, ENDO1
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Gene
AT1G55970 | locus:2012090 | HAC4 | histone acetyltransferase of the CBP family 4
Length: 5902  
Chromosome Location: Chr1: 20932451-20938352
Organism . Short Name: A. thaliana
TAIR Computational Description: histone acetyltransferase of the CBP family 4;(source:Araport11)
TAIR Curator Summary: HAC4 is most likely to be an expressed pseudogene that lacks HAT function. there is a single nucleotide deletion in both the HAC4 genomic and cDNA sequences relative to its homologs. The resulting frameshift within the open reading frame causes a stop codon to occur within the predicted acetyltransferase catalytic domain.
TAIR Short Description: histone acetyltransferase of the CBP family 4
TAIR Aliases: HAC04, HAC4, HAC6, HAG04, HAG4
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Gene
AT5G10860 | locus:2183740 | CBSX3 | CBS domain containing protein 3
Length: 1651  
Chromosome Location: Chr5: 3428842-3430492
Organism . Short Name: A. thaliana
TAIR Computational Description: Cystathionine beta-synthase (CBS) family protein;(source:Araport11)
TAIR Curator Summary: Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system.
TAIR Short Description: Cystathionine beta-synthase (CBS) family protein
TAIR Aliases: CBSX3
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Gene
AT4G36910 | locus:2114970 | LEJ2 | LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2
Length: 2854  
Chromosome Location: Chr4: 17390626-17393479
Organism . Short Name: A. thaliana
TAIR Computational Description: Cystathionine beta-synthase (CBS) family protein;(source:Araport11)
TAIR Curator Summary: Encodes a single cystathionine beta-synthase domain-containing protein. Modulates development by regulating the thioredoxin system.
TAIR Short Description: Cystathionine beta-synthase (CBS) family protein
TAIR Aliases: CBSX1, CDCP2, LEJ2
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Gene
AT5G13820 | locus:2159048 | TBP1 | telomeric DNA binding protein 1
Length: 3898  
Chromosome Location: Chr5: 4460840-4464737
Organism . Short Name: A. thaliana
TAIR Computational Description: telomeric DNA binding protein 1;(source:Araport11)
TAIR Curator Summary: Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding (SANT) domain in C-terminus that prefers the sequence TTTAGGG. Single Myb Histone (SMH) gene family member.
TAIR Short Description: telomeric DNA binding protein 1
TAIR Aliases: ATBP-1, ATBP1, ATTBP1, HPPBF-1, TBP1
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Gene
AT5G67580 | locus:2158611 | TRB2 | -
Length: 2207  
Chromosome Location: Chr5: 26955568-26957774
Organism . Short Name: A. thaliana
TAIR Computational Description: Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11)
TAIR Curator Summary: Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.
TAIR Short Description: Homeodomain-like/winged-helix DNA-binding family protein
TAIR Aliases: ATTBP3, ATTRB2, TBP3, TRB2
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Gene
AT4G31790 | locus:2124859 | AT4G31790 | -
 
Length: 1868  
Chromosome Location: Chr4: 15377158-15379025
Organism . Short Name: A. thaliana
TAIR Computational Description: Tetrapyrrole (Corrin/Porphyrin) Methylase;(source:Araport11)
TAIR Curator Summary: AT4G31790.1 structure is probably incorrect. Annotated CDS doesn't translate into a single open reading frame.
TAIR Short Description: Tetrapyrrole (Corrin/Porphyrin) Methylases
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Gene
AT2G46440 | locus:2039099 | CNGC11 | cyclic nucleotide-gated channels
Length: 3250  
Chromosome Location: Chr2: 19061688-19064937
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-gated channels;(source:Araport11)
TAIR Curator Summary: Member of Cyclic nucleotide gated channel family. Positive regulator of resistance against avirulent fungal pathogen. The mRNA is cell-to-cell mobile.
TAIR Short Description: cyclic nucleotide-gated channels
TAIR Aliases: ATCNGC11, CNGC11
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Gene
AT1G19400 | locus:2016382 | AT1G19400 | -
Length: 2462  
Chromosome Location: Chr1: 6712022-6714483
Organism . Short Name: A. thaliana
TAIR Computational Description: Erythronate-4-phosphate dehydrogenase family protein;(source:Araport11)
TAIR Curator Summary: Tail-anchored (TA) OEP membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids.
TAIR Short Description: Erythronate-4-phosphate dehydrogenase family protein
TAIR Aliases: E-4PDHase
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Gene
AT1G28540 | locus:2018713 | AT1G28540 | -
 
Length: 1787  
Chromosome Location: Chr1: 10035617-10037403
Organism . Short Name: A. thaliana
TAIR Computational Description: transmembrane protein;(source:Araport11)
TAIR Curator Summary: Tail-anchored (TA) OEP membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids.
TAIR Short Description: NULL
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Gene
AT1G01700 | locus:2198220 | ROPGEF2 | ROP (rho of plants) guanine nucleotide exchange factor 2
Length: 2361  
Chromosome Location: Chr1: 259307-261667
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 2;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 2
TAIR Aliases: ATROPGEF2, ROPGEF2
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Gene
AT1G31650 | locus:2028701 | ROPGEF14 | ROP (rho of plants) guanine nucleotide exchange factor 14
Length: 4541  
Chromosome Location: Chr1: 11326251-11330791
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 14;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 14
TAIR Aliases: ATROPGEF14, ROPGEF14
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Gene
AT4G13240 | locus:2119320 | ROPGEF9 | ROP (rho of plants) guanine nucleotide exchange factor 9
Length: 2673  
Chromosome Location: Chr4: 7679950-7682622
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 9;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 9
TAIR Aliases: ATROPGEF9, ROPGEF9
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Gene
AT3G16130 | locus:2093467 | ROPGEF13 | ROP (rho of plants) guanine nucleotide exchange factor 13
Length: 2529  
Chromosome Location: Chr3: 5466246-5468774
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 13;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 13
TAIR Aliases: ATROPGEF13, PIRF2, ROPGEF13
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Gene
AT3G24620 | locus:2091742 | ROPGEF8 | ROP (rho of plants) guanine nucleotide exchange factor 8
Length: 2504  
Chromosome Location: Chr3: 8980400-8982903
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 8;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 8
TAIR Aliases: ATROPGEF8, ROPGEF8
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Gene
AT3G55660 | locus:2078976 | ROPGEF6 | ROP (rho of plants) guanine nucleotide exchange factor 6
Length: 2691  
Chromosome Location: Chr3: 20648794-20651484
Organism . Short Name: A. thaliana
TAIR Computational Description: ROP (rho of plants) guanine nucleotide exchange factor 6;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: ROP (rho of plants) guanine nucleotide exchange factor 6
TAIR Aliases: ATROPGEF6, ROPGEF6
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Gene
AT4G00460 | locus:2126071 | ROPGEF3 | ROP (rho of plants) guanine nucleotide exchange factor 3
Length: 2698  
Chromosome Location: Chr4: 211000-213697
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 3;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 3
TAIR Aliases: ATROPGEF3, ROPGEF3
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Gene
AT4G32272 | locus:4010713922 | AT4G32272 | -
Length: 3134  
Chromosome Location: Chr4: 15576763-15579896
Organism . Short Name: A. thaliana
TAIR Computational Description: Nucleotide/sugar transporter family protein;(source:Araport11)
TAIR Curator Summary: Golgi-localized nucleotide sugar (UDP-GlcNAc) transporter that delivers an essential substrate for the maturation of N-glycans and the GIPC class of sphingolipids.
TAIR Short Description: Nucleotide/sugar transporter family protein
TAIR Aliases: UGNT1
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: A loss-of-function mutation due to a single nucleotide deletion in gibberellin20-oxidase1 (GA5) was identified as the cause of dwarfism in an alpine accession.
Organism: A. thaliana
Gene: GA20OX1
PubMed Id: 25941313
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Gene
AT5G57340 | locus:2165590 | AT5G57340 | -
 
Length: 3348  
Chromosome Location: Chr5: 23225951-23229298
Organism . Short Name: A. thaliana
TAIR Computational Description: ras guanine nucleotide exchange factor Q-like protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: NULL
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Ontology Term Synonym
Ontology Term Synonym
Name: amplified fragment length polymorphism PCR
Type: synonym
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SO Term
SO:0001830 | AFLP_fragment
Description: A PCR product obtained by applying the AFLP technique, based on a restriction enzyme digestion of genomic DNA and an amplification of the resulting fragments.
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Gene
AT5G12990 | locus:2182325 | CLE40 | CLAVATA3/ESR-RELATED 40
Length: 551  
Chromosome Location: Chr5: 4109234-4109784
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 40;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 40
TAIR Aliases: CLE40
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Gene
AT1G05065 | locus:504956102 | CLE20 | CLAVATA3/ESR-RELATED 20
Length: 717  
Chromosome Location: Chr1: 1454606-1455322
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 20;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 20
TAIR Aliases: CLE20
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Gene
AT1G06225 | locus:505006104 | CLE3 | CLAVATA3/ESR-RELATED 3
Length: 381  
Chromosome Location: Chr1: 1905918-1906298
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 3;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 3
TAIR Aliases: CLE3
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Gene
AT2G31081 | locus:504955980 | CLE4 | CLAVATA3/ESR-RELATED 4
Length: 608  
Chromosome Location: Chr2: 13238021-13238628
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 4;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 4
TAIR Aliases: CLE4
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Gene
AT2G31082 | locus:504955981 | CLE7 | CLAVATA3/ESR-RELATED 7
Length: 512  
Chromosome Location: Chr2: 13241345-13241856
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 7;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 7
TAIR Aliases: CLE7
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Gene
AT2G31083 | locus:504955982 | CLE5 | CLAVATA3/ESR-RELATED 5
Length: 839  
Chromosome Location: Chr2: 13252076-13252914
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 5;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 5
TAIR Aliases: AtCLE5, CLE5
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Gene
AT1G66145 | locus:504956311 | CLE18 | CLAVATA3/ESR-RELATED 18
Length: 306  
Chromosome Location: Chr1: 24628530-24628835
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 18;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 18
TAIR Aliases: CLE18
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Gene
AT1G68795 | locus:505006210 | CLE12 | CLAVATA3/ESR-RELATED 12
Length: 1061  
Chromosome Location: Chr1: 25840626-25841686
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 12;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 12
TAIR Aliases: CLE12
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Gene
AT1G69320 | locus:2007091 | CLE10 | CLAVATA3/ESR-RELATED 10
Length: 763  
Chromosome Location: Chr1: 26061774-26062536
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 10;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 10
TAIR Aliases: CLE10
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Gene
AT3G25905 | locus:505006378 | CLE27 | CLAVATA3/ESR-RELATED 27
Length: 757  
Chromosome Location: Chr3: 9486168-9486924
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 27;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 27
TAIR Aliases: CLE27
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Gene
AT5G64800 | locus:2177629 | CLE21 | CLAVATA3/ESR-RELATED 21
Length: 758  
Chromosome Location: Chr5: 25905956-25906713
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 21;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
TAIR Short Description: CLAVATA3/ESR-RELATED 21
TAIR Aliases: CLE21
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Gene
AT2G46450 | locus:2039114 | CNGC12 | cyclic nucleotide-gated channel 12
Length: 4034  
Chromosome Location: Chr2: 19065536-19069569
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-gated channel 12;(source:Araport11)
TAIR Curator Summary: Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner.
TAIR Short Description: cyclic nucleotide-gated channel 12
TAIR Aliases: ATCNGC12, CNGC12
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Protein
A0A1P8B4I5_ARATH | A0A1P8B4I5
Organism . Name: Arabidopsis thaliana
Length: 302  
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Protein
A0A5S9XQI9_ARATH | A0A5S9XQI9
Organism . Name: Arabidopsis thaliana
Length: 418  
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Protein
ENT8_ARATH | Q84XI3
Organism . Name: Arabidopsis thaliana
Length: 389  
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Protein
ENT8_ARATH-2 | Q84XI3-2
Organism . Name: Arabidopsis thaliana
Length: 345  
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Protein
ENT1_ARATH | Q8VXY7
Organism . Name: Arabidopsis thaliana
Length: 450  
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Protein
ENT7_ARATH | Q944P0
Organism . Name: Arabidopsis thaliana
Length: 417  
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Protein
ENT4_ARATH | Q9M0Y2
Organism . Name: Arabidopsis thaliana
Length: 418  
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Protein
ENT5_ARATH | Q9M0Y1
Organism . Name: Arabidopsis thaliana
Length: 419  
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Protein
ENT2_ARATH | Q9SR64
Organism . Name: Arabidopsis thaliana
Length: 417  
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Protein
F4JHS4_ARATH | F4JHS4
Organism . Name: Arabidopsis thaliana
Length: 366  
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Protein
F4JW16_ARATH | F4JW16
Organism . Name: Arabidopsis thaliana
Length: 333  
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Protein
Q8GXK0_ARATH | Q8GXK0
Organism . Name: Arabidopsis thaliana
Length: 54  
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Protein
A0A654FM32_ARATH | A0A654FM32
Organism . Name: Arabidopsis thaliana
Length: 418  
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Protein
ENT6_ARATH | Q944N8
Organism . Name: Arabidopsis thaliana
Length: 418  
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Protein
ENT3_ARATH | Q9M0Y3
Organism . Name: Arabidopsis thaliana
Length: 418  
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Gene
AT3G51050 | locus:2080988 | AT3G51050 | -
Length: 4122  
Chromosome Location: Chr3: 18953842-18957963
Organism . Short Name: A. thaliana
TAIR Computational Description: FG-GAP repeat-containing protein;(source:Araport11)
TAIR Curator Summary: NERD1 is a single copy locus encoding a protein of unknown function that is localized to the nucleus. Single mutants show defects in root hair growth, root meristem function, cell elongation. NERD1 appears to act synergistically with the exocyst in root development.
TAIR Short Description: FG-GAP repeat-containing protein
TAIR Aliases: NERD1
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Gene
AT4G23910 | locus:2138111 | AT4G23910 | -
Length: 2916  
Chromosome Location: Chr4: 12426546-12429461
Organism . Short Name: A. thaliana
TAIR Computational Description: hypothetical protein;(source:Araport11)
TAIR Curator Summary: UAP56-interacting factor2, binds single stranded RNA and, along with UIEF1,,appears to play a role in nuclear export of RNA.
TAIR Short Description: NULL
TAIR Aliases: UIEF2
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Gene
AT4G34120 | locus:2124276 | LEJ1 | LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1
Length: 2212  
Chromosome Location: Chr4: 16340907-16343118
Organism . Short Name: A. thaliana
TAIR Computational Description: Cystathionine beta-synthase (CBS) family protein;(source:Araport11)
TAIR Curator Summary: Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system. The mRNA is cell-to-cell mobile.
TAIR Short Description: Cystathionine beta-synthase (CBS) family protein
TAIR Aliases: CBSX2, CDCP1, LEJ1
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Gene
AT4G10970 | locus:2123471 | AT4G10970 | -
Length: 3139  
Chromosome Location: Chr4: 6719207-6722345
Organism . Short Name: A. thaliana
TAIR Computational Description: ribosome maturation factor;(source:Araport11)
TAIR Curator Summary: UAP56-interacting factor1, binds single stranded RNA and, along with UIEF2,,appears to play a role in nuclear export of RNA.
TAIR Short Description: NULL
TAIR Aliases: UIEF1
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