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Search results 1 to 100 out of 555 for Single Nucleotide Polymorphism

Organism restricted to A. thaliana (x)

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Organism: A. thaliana
Type Details Score
Gene
Length: 1096  
Chromosome Location: Chr1: 11739304-11740399
Organism . Short Name: A. thaliana
TAIR Computational Description: Single hybrid motif superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Single hybrid motif superfamily protein
TAIR Aliases: GDC-H1
Gene  
Length: 1768  
Chromosome Location: Chr2: 14805639-14807406
Organism . Short Name: A. thaliana
TAIR Computational Description: Single hybrid motif superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Single hybrid motif superfamily protein
Gene
Length: 2681  
Chromosome Location: Chr1: 19614931-19617611
Organism . Short Name: A. thaliana
TAIR Computational Description: Single hybrid motif superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Single hybrid motif superfamily protein
TAIR Aliases: BADC2, BLP1
Gene  
Length: 1865  
Chromosome Location: Chr1: 28522554-28524418
Organism . Short Name: A. thaliana
TAIR Computational Description: Single hybrid motif superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Single hybrid motif superfamily protein
Gene
Length: 3206  
Chromosome Location: Chr3: 5316916-5320121
Organism . Short Name: A. thaliana
TAIR Computational Description: Single hybrid motif superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Single hybrid motif superfamily protein
TAIR Aliases: BADC3, BLP2
Gene
Length: 2785  
Chromosome Location: Chr2: 17474527-17477311
Organism . Short Name: A. thaliana
TAIR Computational Description: guanylate kinase 1;(source:Araport11)
TAIR Curator Summary: Guanylate kinase. Involved in nucleotide metabolism.
TAIR Short Description: guanylate kinase 1
TAIR Aliases: AGK1, GK-1
Gene  
Length: 560  
Chromosome Location: Chr1: 4366577-4367136
Organism . Short Name: A. thaliana
TAIR Computational Description: nucleotide binding protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: nucleotide binding
Gene
Length: 2688  
Chromosome Location: Chr2: 158183-160870
Organism . Short Name: A. thaliana
TAIR Computational Description: nucleotide binding protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: nucleotide binding
TAIR Aliases: AIP1-1
Gene  
Length: 3800  
Chromosome Location: Chr3: 19277594-19281393
Organism . Short Name: A. thaliana
TAIR Computational Description: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein;(source:Araport11)
TAIR Curator Summary: Contains single CCCH domain.
TAIR Short Description: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Gene
Length: 3326  
Chromosome Location: Chr4: 14854694-14858019
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-gated channel 17;(source:Araport11)
TAIR Curator Summary: member of Cyclic nucleotide gated channel family
TAIR Short Description: cyclic nucleotide-gated channel 17
TAIR Aliases: ATCNGC17, CNGC17
Gene
Length: 2682  
Chromosome Location: Chr4: 18315545-18318226
Organism . Short Name: A. thaliana
TAIR Computational Description: nucleotide sugar transporter-KT 1;(source:Araport11)
TAIR Curator Summary: Encodes a golgi localized nucleotide sugar transporter.
TAIR Short Description: nucleotide sugar transporter-KT 1
TAIR Aliases: ATNST-KT1, NST-K1, URGT4
Gene
Length: 3528  
Chromosome Location: Chr3: 6045002-6048529
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide gated channel 19;(source:Araport11)
TAIR Curator Summary: member of Cyclic nucleotide gated channel family
TAIR Short Description: cyclic nucleotide gated channel 19
TAIR Aliases: ATCNGC19, CNGC19
Gene
Length: 3004  
Chromosome Location: Chr3: 17721137-17724140
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-gated channel 16;(source:Araport11)
TAIR Curator Summary: member of Cyclic nucleotide gated channel family
TAIR Short Description: cyclic nucleotide-gated channel 16
TAIR Aliases: ATCNGC16, CNGC16
Gene
Length: 3389  
Chromosome Location: Chr4: 434217-437605
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-gated channel 13;(source:Araport11)
TAIR Curator Summary: member of Cyclic nucleotide gated channel family
TAIR Short Description: cyclic nucleotide-gated channel 13
TAIR Aliases: ATCNGC13, CNGC13
Gene
Length: 3309  
Chromosome Location: Chr5: 21537721-21541029
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide gated channel 1;(source:Araport11)
TAIR Curator Summary: member of Cyclic nucleotide gated channel family
TAIR Short Description: cyclic nucleotide gated channel 1
TAIR Aliases: ATCNGC1, CNGC1
Gene
Length: 3058  
Chromosome Location: Chr4: 8845812-8848869
Organism . Short Name: A. thaliana
TAIR Computational Description: F-box/RNI-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Contributes to UV tolerance through nucleotide excision repair.
TAIR Short Description: F-box/RNI-like superfamily protein
TAIR Aliases: RAD7b
Gene
Length: 3453  
Chromosome Location: Chr2: 2352145-2355597
Organism . Short Name: A. thaliana
TAIR Computational Description: F-box/LRR protein;(source:Araport11)
TAIR Curator Summary: Contributes to UV tolerance through nucleotide excision repair.
TAIR Short Description: NULL
TAIR Aliases: RAD7a
Gene
Length: 2362  
Chromosome Location: Chr5: 7238174-7240535
Organism . Short Name: A. thaliana
TAIR Computational Description: RNI-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Contributes to UV tolerance through nucleotide excision repair.
TAIR Short Description: RNI-like superfamily protein
TAIR Aliases: RAD7c
Gene
Length: 2704  
Chromosome Location: Chr3: 1479339-1482042
Organism . Short Name: A. thaliana
TAIR Computational Description: nucleotide repair protein;(source:Araport11)
TAIR Curator Summary: encodes a homolog of human ERCC1 protein (yeast RAD10), which is a DNA repair endonuclease. Mutants are sensitive to UV-B and gamma radiation (G2 cell cycle phase arrest) and are defective in dark-repair of pyrimidine pyrimidone dimers. This protein incises the 5' end of damaged DNA, similar to ERCC1/RAD10.
TAIR Short Description: nucleotide repair protein, putative
TAIR Aliases: ERCC1, UVR7
Gene
Length: 3068  
Chromosome Location: Chr1: 30191538-30194605
Organism . Short Name: A. thaliana
TAIR Computational Description: nucleotide transporter 1;(source:Araport11)
TAIR Curator Summary: Encodes an ATP/ADP transporter. The mRNA is cell-to-cell mobile.
TAIR Short Description: nucleotide transporter 1
TAIR Aliases: ATNTT1, NTT1
Gene  
Length: 3306  
Chromosome Location: Chr4: 14061403-14064708
Organism . Short Name: A. thaliana
TAIR Computational Description: WD repeat and SOF domain-containing protein 1;(source:Araport11)
TAIR Curator Summary: This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase
TAIR Short Description: nucleotide binding;protein binding
Gene
Length: 2845  
Chromosome Location: Chr1: 4323533-4326377
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA processing FACTOR;(source:Araport11)
TAIR Curator Summary: Encodes RNA PROCESSING FACTOR 1 (RPF1), a pentatricopeptide repeat (PPR) protein of the P-class containing canonical PPR-repeats. RPF1 is required for the 5?-end processing of the nad4 mRNA in mitochondria. Ler and other accessions impaired in processing of the nad4 mRNA 5′-end, contain a single nucleotide polymorphism (SNP) 807 nucleotides downstream of the predicted translation start codon (G807A). The resulting premature translation termination codon abolishes the function of the RPF1 gene in Ler. Required for the formation of nad4L-atp4 transcripts with -318 5′ termini.
TAIR Short Description: ATP binding;nucleic acid binding;helicases
TAIR Aliases: RPF1
Gene
Length: 3442  
Chromosome Location: Chr4: 8244053-8247494
Organism . Short Name: A. thaliana
TAIR Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)
TAIR Curator Summary: Orphan kinesin with processive motility on single microtubules.
TAIR Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR Aliases: PAKRP2
Gene
Length: 1711  
Chromosome Location: Chr1: 26502909-26504619
Organism . Short Name: A. thaliana
TAIR Computational Description: equilibrative nucleotide transporter 1;(source:Araport11)
TAIR Curator Summary: encodes an adenosine transporter that catalyze a proton-dependent adenosine transport. The mRNA is cell-to-cell mobile.
TAIR Short Description: equilibrative nucleotide transporter 1
TAIR Aliases: ENT1, ENT1,AT
Gene
Length: 2888  
Chromosome Location: Chr4: 477141-480028
Organism . Short Name: A. thaliana
TAIR Computational Description: adenine nucleotide transporter 1;(source:Araport11)
TAIR Curator Summary: Adenine nucleotide transporter. Located in mitochondrion. Expressed in a broad range of tissues, but predominantly in root tips. Loss of function mutants exhibit reduced root growth and respiration.
TAIR Short Description: adenine nucleotide transporter 1
TAIR Aliases: ADNT1
Gene
Length: 2003  
Chromosome Location: Chr5: 20734136-20736138
Organism . Short Name: A. thaliana
TAIR Computational Description: nucleotide binding protein 35;(source:Araport11)
TAIR Curator Summary: Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.
TAIR Short Description: nucleotide binding protein 35
TAIR Aliases: ATNBP35, NBP35
Protein
Organism . Name: Arabidopsis thaliana
Length: 249  
Protein
Organism . Name: Arabidopsis thaliana
Length: 173  
Protein
Organism . Name: Arabidopsis thaliana
Length: 247  
Protein
Organism . Name: Arabidopsis thaliana
Length: 263  
Gene
Length: 1481  
Chromosome Location: Chr1: 4747186-4748666
Organism . Short Name: A. thaliana
TAIR Computational Description: KTI12-like, chromatin associated protein;(source:Araport11)
TAIR Curator Summary: Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots. Mutants also have no ncm5U (5-carbamoylmethyluridine).
TAIR Short Description: calmodulin binding;purine nucleotide binding
TAIR Aliases: AtKTI12, DRL1
Gene
Length: 3838  
Chromosome Location: Chr1: 7462327-7466164
Organism . Short Name: A. thaliana
TAIR Computational Description: nucleic acid/nucleotide binding protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: nucleotide binding;nucleic acid binding
TAIR Aliases: NSRb
Gene  
Length: 2204  
Chromosome Location: Chr2: 14789245-14791448
Organism . Short Name: A. thaliana
TAIR Computational Description: ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: nucleotide binding;ATP binding;aminoacyl-tRNA ligases
Gene
Length: 1125  
Chromosome Location: Chr5: 23295652-23296776
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger protein 2;(source:Araport11)
TAIR Curator Summary: Encodes a zinc finger protein containing only a single zinc finger.
TAIR Short Description: zinc finger protein 2
TAIR Aliases: ATZFP2, ZFP2
Gene
Length: 1424  
Chromosome Location: Chr1: 8725789-8727212
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger protein 7;(source:Araport11)
TAIR Curator Summary: Encodes a zinc finger protein containing only a single zinc finger.
TAIR Short Description: zinc finger protein 7
TAIR Aliases: ZFP7
Gene
Length: 2288  
Chromosome Location: Chr1: 24619830-24622117
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger protein 4;(source:Araport11)
TAIR Curator Summary: Encodes a zinc finger protein containing only a single zinc finger.
TAIR Short Description: zinc finger protein 4
TAIR Aliases: ZFP4
Gene
Length: 1228  
Chromosome Location: Chr5: 8687188-8688415
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger protein 3;(source:Araport11)
TAIR Curator Summary: Encodes a zinc finger protein containing only a single zinc finger.
TAIR Short Description: zinc finger protein 3
TAIR Aliases: ZFP3
Gene
Length: 3655  
Chromosome Location: Chr1: 132270-135924
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide gated channel 10;(source:Araport11)
TAIR Curator Summary: member of Cyclic nucleotide gated channel family, regulated by Bacillus amyloliquefaciens under high calcium stress.
TAIR Short Description: cyclic nucleotide gated channel 10
TAIR Aliases: ACBK1, ATCNGC10, CNGC10
Gene
Length: 2146  
Chromosome Location: Chr2: 7180142-7182287
Organism . Short Name: A. thaliana
TAIR Computational Description: GLN phosphoribosyl pyrophosphate amidotransferase 1;(source:Araport11)
TAIR Curator Summary: Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis
TAIR Short Description: GLN phosphoribosyl pyrophosphate amidotransferase 1
TAIR Aliases: ASE1, ATASE, ATASE1
Gene
Length: 4057  
Chromosome Location: Chr5: 23456565-23460621
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide gated channel 5;(source:Araport11)
TAIR Curator Summary: Encodes a cyclic GMP activated Ca2+-permeable cation channel in the plasma membrane of guard cells. Required for constitutive growth of root hairs as Ca2+-permeable channels.
TAIR Short Description: cyclic nucleotide gated channel 5
TAIR Aliases: ATCNGC5, CNGC5
Gene
Length: 2981  
Chromosome Location: Chr1: 2242012-2244992
Organism . Short Name: A. thaliana
TAIR Computational Description: golgi nucleotide sugar transporter 2;(source:Araport11)
TAIR Curator Summary: Encodes a GDP-mannose transporter.
TAIR Short Description: golgi nucleotide sugar transporter 2
TAIR Aliases: GONST2
Gene
Length: 3060  
Chromosome Location: Chr1: 5491133-5494192
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide gated channel 7;(source:Araport11)
TAIR Curator Summary: Encodes a plasma membrane localized member of the cyclic nucleotide gated channel (CNGC) family that is essential for male reproductive fertility.
TAIR Short Description: cyclic nucleotide gated channel 7
TAIR Aliases: ATCNGC7, CNGC7
Gene
Length: 2965  
Chromosome Location: Chr1: 6833669-6836633
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide gated channel 8;(source:Araport11)
TAIR Curator Summary: Encodes a member of the cyclic nucleotide gated channel (CNGC) family that is essential for male reproductive fertility.
TAIR Short Description: cyclic nucleotide gated channel 8
TAIR Aliases: ATCNGC8, CNGC8
Gene
Length: 1636  
Chromosome Location: Chr1: 7678208-7679843
Organism . Short Name: A. thaliana
TAIR Computational Description: golgi nucleotide sugar transporter 5;(source:Araport11)
TAIR Curator Summary: Encodes a Golgi-localized nucleotide-sugar transporter.
TAIR Short Description: golgi nucleotide sugar transporter 5
TAIR Aliases: GONST5
Gene
Length: 3494  
Chromosome Location: Chr2: 19057999-19061492
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide gated channel 3;(source:Araport11)
TAIR Curator Summary: Encodes a cyclic nucleotide gated channel, downstream component of the signaling pathways leading to hypersensitive response (HR) resistance.
TAIR Short Description: cyclic nucleotide gated channel 3
TAIR Aliases: ATCNGC3, CNGC3, CNGC3.C
Gene
Length: 2005  
Chromosome Location: Chr3: 1505831-1507835
Organism . Short Name: A. thaliana
TAIR Computational Description: peroxisomal adenine nucleotide carrier 1;(source:Araport11)
TAIR Curator Summary: encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.
TAIR Short Description: peroxisomal adenine nucleotide carrier 1
TAIR Aliases: AtPNC1, PNC1
Gene
Length: 3522  
Chromosome Location: Chr4: 14926834-14930355
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide gated channel 9;(source:Araport11)
TAIR Curator Summary: member of Cyclic nucleotide gated channel family. Required for constitutive growth of root hairs as Ca2+-permeable channels.
TAIR Short Description: cyclic nucleotide gated channel 9
TAIR Aliases: ATCNGC9, CNGC9
Gene
Length: 1274  
Chromosome Location: Chr1: 18232407-18233680
Organism . Short Name: A. thaliana
TAIR Computational Description: Rho guanine nucleotide exchange factor;(source:Araport11)
TAIR Curator Summary: Paternally expressed gene that is localized around the sperm nuclei of pollen. PEG2 acts as a sponge for siRNA854 during endosperm development, this action is necessary to induce triploid seed abortion.
TAIR Short Description: NULL
TAIR Aliases: PEG2
Gene
Length: 2088  
Chromosome Location: Chr1: 28634881-28636968
Organism . Short Name: A. thaliana
TAIR Computational Description: golgi nucleotide sugar transporter 3;(source:Araport11)
TAIR Curator Summary: Encodes a nucleotide-sugar transporter. It is is likely the primary Golgi GDP-L-galactose transporter, and provides GDP-L-galactose for RG-II biosynthesis. Knockout lines are lethal. RNAi suppressor lines were used for analysis. GDP-L-Galactose transport was affected. This process was required for pectic RG-II biosynthesis.
TAIR Short Description: golgi nucleotide sugar transporter 3
TAIR Aliases: GGLT1, GONST3
Gene  
Length: 1701  
Chromosome Location: Chr3: 21748228-21749928
Organism . Short Name: A. thaliana
TAIR Computational Description: secretion-regulating guanine nucleotide exchange factor;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: NULL
Gene
Length: 3480  
Chromosome Location: Chr2: 5687316-5690795
Organism . Short Name: A. thaliana
TAIR Computational Description: golgi nucleotide sugar transporter 1;(source:Araport11)
TAIR Curator Summary: Encodes a Golgi-localized GDP-mannose transporter. It can transport ADP-glucose in vitro.
TAIR Short Description: golgi nucleotide sugar transporter 1
TAIR Aliases: GONST1
Gene
Length: 1642  
Chromosome Location: Chr5: 5728789-5730430
Organism . Short Name: A. thaliana
TAIR Computational Description: endoplasmic reticulum-adenine nucleotide transporter 1;(source:Araport11)
TAIR Curator Summary: This gene is predicted to encode an ER-localized adenine nucleotide transporter with six putative transmembrane helices. It appears to act as a ATP:ADP antiporter when expressed in E.coli plasma membranes. Transcript levels for several ER-localized chaperones (e.g. BIP1/2) and other ATP-requiring ER proteins (e.g. CPK2) are reduced in er-ant1 knock-out lines, suggesting a lack of adequate ATP transport into the ER in these mutants. They also have reduced seed oil and seed protein levels.
TAIR Short Description: endoplasmic reticulum-adenine nucleotide transporter 1
TAIR Aliases: ER-ANT1
Gene
Length: 1540  
Chromosome Location: Chr5: 6749613-6751152
Organism . Short Name: A. thaliana
TAIR Computational Description: golgi nucleotide sugar transporter 4;(source:Araport11)
TAIR Curator Summary: Encodes a Golgi-localized nucleotide-sugar transporter.
TAIR Short Description: golgi nucleotide sugar transporter 4
TAIR Aliases: GFT1, GONST4
Gene
Length: 2071  
Chromosome Location: Chr5: 9714348-9716418
Organism . Short Name: A. thaliana
TAIR Computational Description: peroxisomal adenine nucleotide carrier 2;(source:Araport11)
TAIR Curator Summary: encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.
TAIR Short Description: peroxisomal adenine nucleotide carrier 2
TAIR Aliases: AtPNC2, PNC2
Gene
Length: 2165  
Chromosome Location: Chr4: 15638353-15640517
Organism . Short Name: A. thaliana
TAIR Computational Description: Mitochondrial substrate carrier family protein;(source:Araport11)
TAIR Curator Summary: Encodes a plastidial nucleotide uniport carrier protein required to export newly synthesized adenylates into the cytosol.
TAIR Short Description: Mitochondrial substrate carrier family protein
TAIR Aliases: ATBT1, BR1, EMB104, EMB42, SHS1
Gene  
Length: 2930  
Chromosome Location: Chr1: 6024636-6027565
Organism . Short Name: A. thaliana
TAIR Computational Description: Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11)
TAIR Curator Summary: Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain.
TAIR Short Description: Homeodomain-like/winged-helix DNA-binding family protein
Gene  
Length: 2665  
Chromosome Location: Chr1: 27380260-27382924
Organism . Short Name: A. thaliana
TAIR Computational Description: Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11)
TAIR Curator Summary: Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain.
TAIR Short Description: Homeodomain-like/winged-helix DNA-binding family protein
Protein
Organism . Name: Arabidopsis thaliana
Length: 457  
Protein
Organism . Name: Arabidopsis thaliana
Length: 234  
Protein
Organism . Name: Arabidopsis thaliana
Length: 457  
Protein
Organism . Name: Arabidopsis thaliana
Length: 294  
Gene
Length: 2061  
Chromosome Location: Chr2: 13658888-13660948
Organism . Short Name: A. thaliana
TAIR Computational Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a xanthosine monophosphate (XMP)phosphatase. Dephosphorylates XMP to xanthosine as an initial step in purine nucleotide catabolism.
TAIR Short Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
TAIR Aliases: XMPP
Gene
Length: 3059  
Chromosome Location: Chr5: 25283063-25286121
Organism . Short Name: A. thaliana
TAIR Computational Description: Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)
TAIR Curator Summary: Nucleotide binding leucine rich repeat protein of the C-NB-LRR (CNL) type. Involved in TOPP4 mediated immune response.
TAIR Short Description: Disease resistance protein (CC-NBS-LRR class) family
TAIR Aliases: SUT1
Gene
Length: 1781  
Chromosome Location: Chr1: 5404130-5405910
Organism . Short Name: A. thaliana
TAIR Computational Description: prephenate dehydrogenase family protein;(source:Araport11)
TAIR Curator Summary: Plastidic arogenate dehydrogenase with minimal prephenate dehydrogenase activity. Contains a single catalytic domain.
TAIR Short Description: prephenate dehydrogenase family protein
TAIR Aliases: TyrA2
Gene  
Length: 4572  
Chromosome Location: Chr4: 10677202-10681773
Organism . Short Name: A. thaliana
TAIR Computational Description: nucleotide/nucleic acid binding protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: nucleotide binding;nucleic acid binding;RNA binding
Gene
Length: 1844  
Chromosome Location: Chr5: 23486777-23488620
Organism . Short Name: A. thaliana
TAIR Computational Description: Transport protein particle (TRAPP) component;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: Transport protein particle (TRAPP) component
TAIR Aliases: TRAPPC5
Gene
Length: 1388  
Chromosome Location: Chr2: 9000450-9001837
Organism . Short Name: A. thaliana
TAIR Computational Description: SNARE-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: SNARE-like superfamily protein
TAIR Aliases: tTRAPPC2(L)
Gene
Length: 3725  
Chromosome Location: Chr2: 19625459-19629183
Organism . Short Name: A. thaliana
TAIR Computational Description: trafficking protein particle complex subunit-like protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: NULL
TAIR Aliases: TRAPPC13
Gene
Length: 1657  
Chromosome Location: Chr3: 1387175-1388831
Organism . Short Name: A. thaliana
TAIR Computational Description: Transport protein particle (TRAPP) component;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: Transport protein particle (TRAPP) component
TAIR Aliases: TRAPPC6, TRS33
Gene
Length: 2115  
Chromosome Location: Chr4: 18475946-18478060
Organism . Short Name: A. thaliana
TAIR Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Aliases: TRAPPC12
Gene
Length: 988  
Chromosome Location: Chr5: 469298-470285
Organism . Short Name: A. thaliana
TAIR Computational Description: SNARE-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: SNARE-like superfamily protein
TAIR Aliases: TRAPPC4
Gene
Length: 3862  
Chromosome Location: Chr3: 6048814-6052675
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-binding transporter 1;(source:Araport11)
TAIR Curator Summary: cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. The mRNA is cell-to-cell mobile.
TAIR Short Description: cyclic nucleotide-binding transporter 1
TAIR Aliases: ATCNGC20, CNBT1, CNGC20
Gene
Length: 2224  
Chromosome Location: Chr1: 30270445-30272668
Organism . Short Name: A. thaliana
TAIR Computational Description: SNARE-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: SNARE-like superfamily protein
TAIR Aliases: TRAPPC2
Gene
Length: 8562  
Chromosome Location: Chr5: 5323133-5331694
Organism . Short Name: A. thaliana
TAIR Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Aliases: TRAPPC8, TRS85
Gene
Length: 2244  
Chromosome Location: Chr5: 22241478-22243721
Organism . Short Name: A. thaliana
TAIR Computational Description: Transport protein particle (TRAPP) component;(source:Araport11)
TAIR Curator Summary: Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: Transport protein particle (TRAPP) component
TAIR Aliases: TRAPPC3
Gene  
Length: 2390  
Chromosome Location: Chr5: 4730836-4733225
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene
Length: 7325  
Chromosome Location: Chr1: 330588-337912
Organism . Short Name: A. thaliana
TAIR Computational Description: SEC7-like guanine nucleotide exchange family protein;(source:Araport11)
TAIR Curator Summary: Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking.
TAIR Short Description: SEC7-like guanine nucleotide exchange family protein
TAIR Aliases: BIG3, EDA10
Gene  
Length: 1987  
Chromosome Location: Chr1: 3154390-3156376
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene  
Length: 1983  
Chromosome Location: Chr1: 3821106-3823088
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene  
Length: 1097  
Chromosome Location: Chr1: 4221779-4222875
Organism . Short Name: A. thaliana
TAIR Computational Description: Nucleotide excision repair, TFIIH, subunit TTDA;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Nucleotide excision repair, TFIIH, subunit TTDA
Gene  
Length: 1691  
Chromosome Location: Chr2: 9043699-9045389
Organism . Short Name: A. thaliana
TAIR Computational Description: Ras guanine nucleotide exchange factor K;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: NULL
Gene
Length: 1787  
Chromosome Location: Chr2: 9248525-9250311
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes gene that is induced in response to desiccation; mRNA expression is seen 10 and 24 hrs after start of desiccation treatment.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: RD2
Gene
Length: 3540  
Chromosome Location: Chr2: 18241469-18245008
Organism . Short Name: A. thaliana
TAIR Computational Description: guanosine nucleotide diphosphate dissociation inhibitor 1;(source:Araport11)
TAIR Curator Summary: GDP dissociation inhibitor involved in vesicular membrane traffic
TAIR Short Description: guanosine nucleotide diphosphate dissociation inhibitor 1
TAIR Aliases: AT-GDI1, ATGDI1, GDI1
Gene  
Length: 1403  
Chromosome Location: Chr2: 19554724-19556126
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene  
Length: 1912  
Chromosome Location: Chr3: 208250-210161
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a universal stress protein (USP)-like protein that has been crystallized in complex with AMP, suggesting that it belongs to the ATP-binding USP subfamily. The mRNA is cell-to-cell mobile.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene
Length: 2366  
Chromosome Location: Chr3: 761004-763369
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: HRU1 is a hypoxia induced universal stress protein. It exists as two splice variants with AT3G03270.2 , which contains a putative dimerization domain, the predominant transcript found under anoxia. It is induced by RAP2.12. Subcellular localization is dynamic; under anoxia the localization of HRU1 shifts from cytoplasm to the plasma membrane.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: HRU1
Gene  
Length: 1179  
Chromosome Location: Chr3: 766685-767863
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene  
Length: 1257  
Chromosome Location: Chr4: 7814888-7816144
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene  
Length: 1613  
Chromosome Location: Chr4: 10370433-10372045
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein
Gene  
Length: 1238  
Chromosome Location: Chr4: 10372658-10373895
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: RNA ligase/cyclic nucleotide phosphodiesterase family protein
Gene
Length: 2530  
Chromosome Location: Chr4: 13678417-13680946
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Contains a universal stress protein domain. Protein is phosphorylated in response to Phytophthora infestans zoospores and xylanase.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: ATPHOS34, PHOS34, USP21
Gene
Length: 6356  
Chromosome Location: Chr4: 16819792-16826147
Organism . Short Name: A. thaliana
TAIR Computational Description: SEC7-like guanine nucleotide exchange family protein;(source:Araport11)
TAIR Curator Summary: Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking.
TAIR Short Description: SEC7-like guanine nucleotide exchange family protein
TAIR Aliases: BIG4
Gene
Length: 3255  
Chromosome Location: Chr4: 17008388-17011642
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a cytoplasmic thiouridylase that is essential for tRNA thiolation. Its activity appears to be important in root development.
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
TAIR Aliases: CTU2
Gene
Length: 7527  
Chromosome Location: Chr4: 17915206-17922732
Organism . Short Name: A. thaliana
TAIR Computational Description: SEC7-like guanine nucleotide exchange family protein;(source:Araport11)
TAIR Curator Summary: Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking.
TAIR Short Description: SEC7-like guanine nucleotide exchange family protein
TAIR Aliases: BIG1
Gene
Length: 2756  
Chromosome Location: Chr5: 1785845-1788600
Organism . Short Name: A. thaliana
TAIR Computational Description: ROP guanine nucleotide exchange factor 5;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description: ROP guanine nucleotide exchange factor 5
TAIR Aliases: ATROPGEF5, ROPGEF5
Gene  
Length: 1967  
Chromosome Location: Chr1: 16896679-16898645
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene  
Length: 1276  
Chromosome Location: Chr1: 18112458-18113733
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Gene
Length: 2575  
Chromosome Location: Chr1: 19455495-19458069
Organism . Short Name: A. thaliana
TAIR Computational Description: rop guanine nucleotide exchange factor-like protein;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .
TAIR Short Description: RHO guanyl-nucleotide exchange factor 11
TAIR Aliases: ATROPGEF11, PIRF1, ROPGEF11
Gene  
Length: 298  
Chromosome Location: Chr1: 23294413-23294710
Organism . Short Name: A. thaliana
TAIR Computational Description: Nucleotide excision repair, TFIIH, subunit TTDA;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Nucleotide excision repair, TFIIH, subunit TTDA
Gene  
Length: 1020  
Chromosome Location: Chr1: 25598331-25599350
Organism . Short Name: A. thaliana
TAIR Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein