help  | faq  | software  | BAR

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, pathways, authors, ontology terms, etc. (e.g. eve, embryo, zen, allele)
  • Use OR to search for either of two terms (e.g. fly OR drosophila) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. dros* for partial matches or fly AND NOT embryo to exclude a term

Search results 301 to 400 out of 43842 for cell

0.088s

Categories

Hits by Category

Hits by Organism

Type Details Score
Gene
Length: 1725  
Chromosome Location: Chr2: 10751656-10753380
Organism . Short Name: A. thaliana
TAIR Computational Description: Serine protease inhibitor (SERPIN) family protein;(source:Araport11)
TAIR Curator Summary: Serine protease inhibitor (SERPIN) family protein;(source:Araport11). Involved in stress response regulated cell death.
TAIR Short Description: Serine protease inhibitor (SERPIN) family protein
TAIR Aliases: AtCCP3, CCP3, SERP5
Gene
Length: 1774  
Chromosome Location: Chr2: 11228825-11230598
Organism . Short Name: A. thaliana
TAIR Computational Description: Serine protease inhibitor (SERPIN) family protein;(source:Araport11)
TAIR Curator Summary: Serine protease inhibitor (SERPIN) family protein;(source:Araport11). Involved in stress response regulated cell death.
TAIR Short Description: Serine protease inhibitor (SERPIN) family protein
TAIR Aliases: SERP4, SRP4
Gene
Length: 742  
Chromosome Location: Chr1: 7865435-7866176
Organism . Short Name: A. thaliana
TAIR Computational Description: Trm112p-like protein;(source:Araport11)
TAIR Curator Summary: Encodes SMO2 (Small Organ 2). Modulates progression of cell division during organ growth.
TAIR Short Description: Trm112p-like protein
TAIR Aliases: AtTRM112b, TRM112b
Gene
Length: 2430  
Chromosome Location: Chr3: 20515630-20518059
Organism . Short Name: A. thaliana
TAIR Computational Description: phragmoplastin interacting protein 1;(source:Araport11)
TAIR Curator Summary: Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation.
TAIR Short Description: phragmoplastin interacting protein 1
TAIR Aliases: PHIP1
Gene
Length: 1853  
Chromosome Location: Chr4: 9978703-9980555
Organism . Short Name: A. thaliana
TAIR Computational Description: NAC domain containing protein 71;(source:Araport11)
TAIR Curator Summary: Encodes ANAC071, a transcription factor involved in cell proliferation in incised inflorescence stems.
TAIR Short Description: NAC domain containing protein 71
TAIR Aliases: anac071, NAC071
Gene
Length: 4316  
Chromosome Location: Chr1: 11249600-11253915
Organism . Short Name: A. thaliana
TAIR Computational Description: Leucine-rich repeat protein kinase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.
TAIR Short Description: Leucine-rich repeat protein kinase family protein
TAIR Aliases: FEI1
Gene
Length: 3847  
Chromosome Location: Chr2: 19191247-19195093
Organism . Short Name: A. thaliana
TAIR Computational Description: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11)
TAIR Curator Summary: ROP (Rho of plant GTPases) family member Involved in cell wall patterning. Encodes ROP inactivator, regulates the formation of ROP-activated domains; these in turn determined the pattern of cell wall pits. Positively regulates pit formation, but negatively regulates pit size, required for periodic formation of secondary cell wall pits.
TAIR Short Description: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
TAIR Aliases: ROPGAP3
Gene
Length: 2801  
Chromosome Location: Chr3: 3617264-3620064
Organism . Short Name: A. thaliana
TAIR Computational Description: rac GTPase activating protein;(source:Araport11)
TAIR Curator Summary: ROP (Rho of plant GTPases) family member Involved in cell wall patterning. Encodes ROP inactivator, regulates the formation of ROP-activated domains; these in turn determined the pattern of cell wall pits. Positively regulates pit formation, but negatively regulates pit size, required for periodic formation of secondary cell wall pits.
TAIR Short Description: rac GTPase activating protein
TAIR Aliases: ROPGAP4
Gene
Length: 3590  
Chromosome Location: Chr5: 20161140-20164729
Organism . Short Name: A. thaliana
TAIR Computational Description: Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11)
TAIR Curator Summary: The gene encodes receptorlike kinase (RLK). Involved in the maintenance organization of cell files or cell morphology in conductive elements. Functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling.
TAIR Short Description: Leucine-rich repeat transmembrane protein kinase family protein
TAIR Aliases: CEPR1, XIP1
Gene
Length: 4934  
Chromosome Location: Chr1: 29957390-29962323
Organism . Short Name: A. thaliana
TAIR Computational Description: Leucine-rich repeat protein kinase family protein;(source:Araport11)
TAIR Curator Summary: VRLK1 is a LRR kinase involved in switching between cell elongation and secondary cell wall thickening.VRLK1 is a member of a gene family that includes a small number of recently duplicated paralogs.
TAIR Short Description: Leucine-rich repeat protein kinase family protein
TAIR Aliases: VRLK1
Gene
Length: 2432  
Chromosome Location: Chr4: 11174450-11176881
Organism . Short Name: A. thaliana
TAIR Computational Description: fatty acid hydroxylase 2;(source:Araport11)
TAIR Curator Summary: encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.
TAIR Short Description: fatty acid hydroxylase 2
TAIR Aliases: ATFAH2, FAH2
Gene
Length: 5710  
Chromosome Location: Chr4: 14409772-14415481
Organism . Short Name: A. thaliana
TAIR Computational Description: NAC domain containing protein 75;(source:Araport11)
TAIR Curator Summary: NAC domain protein involved in negative regulation of flowering and secondary cell wall biosynthesis.
TAIR Short Description: NAC domain containing protein 75
TAIR Aliases: anac075, NAC075, SND4
Gene
Length: 5986  
Chromosome Location: Chr5: 2120472-2126457
Organism . Short Name: A. thaliana
TAIR Computational Description: bZIP transcription factor family protein;(source:Araport11)
TAIR Curator Summary: As part of miR319-TCPs-TGA9/TGA10/ROXY2 regulatory module controls cell fate specification in early anther development.
TAIR Short Description: bZIP transcription factor family protein
TAIR Aliases: bZIP65, TGA10
Gene
Length: 1520  
Chromosome Location: Chr5: 4009168-4010687
Organism . Short Name: A. thaliana
TAIR Computational Description: annexin 8;(source:Araport11)
TAIR Curator Summary: Involved in multiple stress signaling pathways; negatively regulates RPW8.1-mediated cell death and disease resistance.
TAIR Short Description: annexin 8
TAIR Aliases: ANN8, ANNAT8
Gene
Length: 2041  
Chromosome Location: Chr1: 26081566-26083606
Organism . Short Name: A. thaliana
TAIR Computational Description: sporulation protein (DUF155);(source:Araport11)
TAIR Curator Summary: Encodes a mitochondria-localized protein that is required for cell division in the root meristem.
TAIR Short Description: Protein of unknown function (DUF155)
TAIR Aliases: RRG
Gene
Length: 1667  
Chromosome Location: Chr2: 148919-150585
Organism . Short Name: A. thaliana
TAIR Computational Description: ribose-5-phosphate isomerase 2;(source:Araport11)
TAIR Curator Summary: Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.
TAIR Short Description: ribose-5-phosphate isomerase 2
TAIR Aliases: RPI2
Gene
Length: 2584  
Chromosome Location: Chr2: 14665667-14668250
Organism . Short Name: A. thaliana
TAIR Computational Description: fatty acid hydroxylase 1;(source:Araport11)
TAIR Curator Summary: encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.
TAIR Short Description: fatty acid hydroxylase 1
TAIR Aliases: ATFAH1, FAH1
Gene
Length: 6735  
Chromosome Location: Chr1: 2621860-2628594
Organism . Short Name: A. thaliana
TAIR Computational Description: bZIP transcription factor family protein;(source:Araport11)
TAIR Curator Summary: As part of miR319-TCPs-TGA9/TGA10/ROXY2 regulatory module controls cell fate specification in early anther development.
TAIR Short Description: bZIP transcription factor family protein
TAIR Aliases: bZIP21, TGA9
Gene
Length: 2348  
Chromosome Location: Chr1: 4010757-4013104
Organism . Short Name: A. thaliana
TAIR Computational Description: Synaptobrevin family protein;(source:Araport11)
TAIR Curator Summary: Member of SEC22 Gene Family; regulates cell morphogenesis via affecting cytoskeleton organization and stabilities.
TAIR Short Description: Synaptobrevin family protein
TAIR Aliases: ATSEC22, SEC22, SEC221
Gene
Length: 3876  
Chromosome Location: Chr3: 2596023-2599898
Organism . Short Name: A. thaliana
TAIR Computational Description: elongation defective 1 protein / ELD1 protein;(source:Araport11)
TAIR Curator Summary: mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein
TAIR Short Description: elongation defective 1 protein / ELD1 protein
TAIR Aliases: ABI8, ELD1, KOB1
Gene
Length: 758  
Chromosome Location: Chr1: 17716051-17716808
Organism . Short Name: A. thaliana
TAIR Computational Description: pectin methylesterase inhibitor 1;(source:Araport11)
TAIR Curator Summary: Pectin methylesterase inhibitor AtPMEI1. Inactivates AtPPME1 in vitro. Localized to pollen tube cell tip.
TAIR Short Description: pectin methylesterase inhibitor 1
TAIR Aliases: ATPMEI1, PMEI1
Gene
Length: 1163  
Chromosome Location: Chr3: 7969681-7970843
Organism . Short Name: A. thaliana
TAIR Computational Description: Seed maturation protein;(source:Araport11)
TAIR Curator Summary: Atrab28 plays a role in the ion cell balance during late embryogenesis and germination.
TAIR Short Description: Seed maturation protein
TAIR Aliases: ATRAB28, RAB28
Gene
Length: 5982  
Chromosome Location: Chr4: 15790133-15796114
Organism . Short Name: A. thaliana
TAIR Computational Description: Homeodomain-like protein;(source:Araport11)
TAIR Curator Summary: Encodes a putative c-myb-like transcription factor with three MYB repeats. Part of the TSO1-MYB3R1 transcriptional module that controls the number and size of the stem cell pools at the shoot apex and root tip; the TSO1-MYB3R1 module is integrated with the cell cycle machinery to control cell division at the shoot meristem.
TAIR Short Description: Homeodomain-like protein
TAIR Aliases: ATMYB3R-1, ATMYB3R1, MYB3R-1, MYB3R1, PC-MYB1
Gene
Length: 1200  
Chromosome Location: Chr5: 880148-881347
Organism . Short Name: A. thaliana
TAIR Computational Description: C2H2-type zinc finger family protein;(source:Araport11)
TAIR Curator Summary: C2H2 zinc finger protein; part of the gene regulatory network of root cap developmental programmed cell death acting downstream of SMB. ZAT14-inducible misexpression leads to extensive ectopic cell death. Both the canonical EAR motif and a conserved L-box motif of ZAT14 act as transcriptional repression motifs and are required to trigger cell death.
TAIR Short Description: C2H2-type zinc finger family protein
TAIR Aliases: ZAT14
Gene
Length: 792  
Chromosome Location: Chr5: 1266625-1267416
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclin-dependent protein kinase inhibitor;(source:Araport11)
TAIR Curator Summary: Encodes a novel nuclear 14-kD protein containing a cyclin binding motif and a motif found in ICK/KRP cell cycle inhibitor proteins. It is required for coordinating cell division and cell differentiation during the development of Arabidopsis trichomes, playing a key role in the mitosis-to-endoreduplication transition. It interacts with D-type cyclins in vivo.
TAIR Short Description: cyclin-dependent protein kinase inhibitors
TAIR Aliases: SIM
Gene
Length: 8520  
Chromosome Location: Chr2: 9406059-9414578
Organism . Short Name: A. thaliana
TAIR Computational Description: binding protein;(source:Araport11)
TAIR Curator Summary: Encodes a protein involved in cell elongation in root and anther filaments. Mutants have greater cell volumes in root tissues and have additive phenotypes with other cell expansion mutants such as those carrying mutations in COB, QUI and POM1 loci. POM2/CSI1 promotes Cellulose Synthase and microtubule co-alignment. The mRNA is cell-to-cell mobile.
TAIR Short Description: binding
TAIR Aliases: CSI1, POM2
Gene
Length: 3497  
Chromosome Location: Chr4: 17110645-17114141
Organism . Short Name: A. thaliana
TAIR Computational Description: NAC domain containing protein 76;(source:Araport11)
TAIR Curator Summary: Encodes a NAC-domain transcription factor that is expressed in developing xylem. Over expression of this protein causes ectopic secondary cell wall growth. Complements some of the cell wall defects seen in SND1/NST1 double mutants.
TAIR Short Description: NAC domain containing protein 76
TAIR Aliases: ANAC076, NAC076, VND2
Gene
Length: 2826  
Chromosome Location: Chr5: 1679230-1682055
Organism . Short Name: A. thaliana
TAIR Computational Description: gamma-tubulin complex protein 2;(source:Araport11)
TAIR Curator Summary: Paralog of TUBG1, required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant. Enriched at the post-cytokinetic cell edges in leaves and roots.
TAIR Short Description: gamma-tubulin complex protein 2
TAIR Aliases: ATGCP2, GCP2, TUBG2
Gene
Length: 2632  
Chromosome Location: Chr1: 29081654-29084285
Organism . Short Name: A. thaliana
TAIR Computational Description: CYCLIN A1;(source:Araport11)
TAIR Curator Summary: Encodes a core cell cycle gene involved in meiosis II during microsporogenesis. Recessive mutants exhibit delayed and asynchronous meiosis in pollen mother cell populations and uncoordinated nuclear division and cytokinesis resulting in dyad microspores.
TAIR Short Description: CYCLIN A1;2
TAIR Aliases: CYCA1, CYCA1;2, DYP, TAM
Gene
Length: 3103  
Chromosome Location: Chr1: 4162826-4165928
Organism . Short Name: A. thaliana
TAIR Computational Description: NAC 007;(source:Araport11)
TAIR Curator Summary: Encodes a NAC-domain transcription factor that is expressed in developing xylem. Over expression of this protein causes ectopic secondary cell wall growth. Complements some of the cell wall defects seen in SND1/NST1 double mutants.
TAIR Short Description: NAC 007
TAIR Aliases: ANAC007, EMB2749, NAC007, VND4
Protein
Organism . Name: Arabidopsis thaliana
Length: 844  
Protein
Organism . Name: Arabidopsis thaliana
Length: 670  
Protein
Organism . Name: Arabidopsis thaliana
Length: 604  
Protein
Organism . Name: Arabidopsis thaliana
Length: 599  
Protein
Organism . Name: Arabidopsis thaliana
Length: 264  
Protein
Organism . Name: Arabidopsis thaliana
Length: 349  
Protein
Organism . Name: Arabidopsis thaliana
Length: 705  
Protein
Organism . Name: Arabidopsis thaliana
Length: 599  
Protein
Organism . Name: Arabidopsis thaliana
Length: 705  
Protein
Organism . Name: Arabidopsis thaliana
Length: 599  
Protein
Organism . Name: Arabidopsis thaliana
Length: 351  
Protein
Organism . Name: Arabidopsis thaliana
Length: 316  
Protein
Organism . Name: Arabidopsis thaliana
Length: 222  
Gene
Length: 2816  
Chromosome Location: Chr4: 12431097-12433912
Organism . Short Name: A. thaliana
TAIR Computational Description: UDP-D-glucose/UDP-D-galactose 4-epimerase 2;(source:Araport11)
TAIR Curator Summary: Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in growth and cell wall carbohydrate biosynthesis.
TAIR Short Description: UDP-D-glucose/UDP-D-galactose 4-epimerase 2
TAIR Aliases: ATUGE2, UGE2
Gene
Length: 3496  
Chromosome Location: Chr4: 13529260-13532755
Organism . Short Name: A. thaliana
TAIR Computational Description: Galactosyltransferase family protein;(source:Araport11)
TAIR Curator Summary: Putative beta 1,3-galactosyltransferase that acts redundantly with CAGE1 during primary and secondary cell wall biosynthesis.
TAIR Short Description: Galactosyltransferase family protein
TAIR Aliases: CAGE2
Gene
Length: 3290  
Chromosome Location: Chr4: 14703065-14706354
Organism . Short Name: A. thaliana
TAIR Computational Description: auxin response factor 16;(source:Araport11)
TAIR Curator Summary: Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.
TAIR Short Description: auxin response factor 16
TAIR Aliases: ARF16
Gene
Length: 1546  
Chromosome Location: Chr5: 3433742-3435287
Organism . Short Name: A. thaliana
TAIR Computational Description: myosin heavy chain-like protein;(source:Araport11)
TAIR Curator Summary: Functions redundantly with POLAR, a stomatal lineage scaffolding protein to regulate stomatal asymmetric cell division.
TAIR Short Description: myosin heavy chain-related
TAIR Aliases: PL1
Gene
Length: 3007  
Chromosome Location: Chr5: 6979157-6982163
Organism . Short Name: A. thaliana
TAIR Computational Description: guanine nucleotide-binding protein subunit gamma;(source:Araport11)
TAIR Curator Summary: Encodes an atypical heterotrimeric G-protein gamma-subunit involved in guard cell K+-channel regulation and morphological development.
TAIR Short Description: NULL
TAIR Aliases: AGG3
Gene
Length: 1256  
Chromosome Location: Chr2: 14689624-14690879
Organism . Short Name: A. thaliana
TAIR Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)
TAIR Curator Summary: Basic helix loop helix protein. Functions redundantly with BNB1 in microgametogenesis, specificaly, generative cell differentiation.
TAIR Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR Aliases: BNB2
Gene
Length: 3275  
Chromosome Location: Chr1: 1490974-1494248
Organism . Short Name: A. thaliana
TAIR Computational Description: Galactosyltransferase family protein;(source:Araport11)
TAIR Curator Summary: Putative beta 1,3-galactosyltransferase that acts redundantly with CAGE2 during primary and secondary cell wall biosynthesis.
TAIR Short Description: Galactosyltransferase family protein
TAIR Aliases: CAGE1
Gene
Length: 1016  
Chromosome Location: Chr1: 10879173-10880188
Organism . Short Name: A. thaliana
TAIR Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)
TAIR Curator Summary: Basic helix loop helix protein. Functions redundantly with BNB2 in microgametogenesis, specificaly, generative cell differentiation.
TAIR Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR Aliases: BNB1
Gene
Length: 7203  
Chromosome Location: Chr1: 11399607-11406809
Organism . Short Name: A. thaliana
TAIR Computational Description: Formin Homology 14;(source:Araport11)
TAIR Curator Summary: Encodes the Type II Arabidopsis formin14. Interacts with microtubules and microfilaments to regulate cell division.
TAIR Short Description: Formin Homology 14
TAIR Aliases: AFH14, AtFH14
Gene
Length: 1089  
Chromosome Location: Chr3: 21548484-21549572
Organism . Short Name: A. thaliana
TAIR Computational Description: lateral organ boundaries-domain 29;(source:Araport11)
TAIR Curator Summary: This gene contains two auxin-responsive element (AuxRE). Required for triggering cell reprogramming during callus formation.
TAIR Short Description: lateral organ boundaries-domain 29
TAIR Aliases: ASL16, LBD29
Gene
Length: 3649  
Chromosome Location: Chr4: 306869-310517
Organism . Short Name: A. thaliana
TAIR Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a Golgi-localized type II membrane pectin methyltransferase regulating cell wall biosynthesis in suspension cells.
TAIR Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
TAIR Aliases: QUA3
Gene
Length: 1782  
Chromosome Location: Chr5: 16779643-16781424
Organism . Short Name: A. thaliana
TAIR Computational Description: GRAS family transcription factor;(source:Araport11)
TAIR Curator Summary: Encodes a GRAS family transcription factor that is involved in bundle sheath cell fate specification.
TAIR Short Description: GRAS family transcription factor
TAIR Aliases: AtSCL23, SCL23
Gene  
Length: 2918  
Chromosome Location: Chr4: 976246-979163
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
Gene
Length: 3065  
Chromosome Location: Chr1: 23399112-23402176
Organism . Short Name: A. thaliana
TAIR Computational Description: GRAS family transcription factor;(source:Araport11)
TAIR Curator Summary: Transcription factor belonging to the GRAS family which controls the mitotic cell cycle and division plane orientation. Forms a dimer with the AP2-type transcription factor, SMOS1 , regulating G2 to control cell size and number.
TAIR Short Description: GRAS family transcription factor
TAIR Aliases: SCL28
Gene
Length: 2679  
Chromosome Location: Chr3: 18200587-18203265
Organism . Short Name: A. thaliana
TAIR Computational Description: peroxidase CA;(source:Araport11)
TAIR Curator Summary: Class III peroxidase Perx33. Expressed in roots. Located in the cell wall. Involved in cell elongation. Expression activated by light. May play a role in generating H2O2 during defense response. The mRNA is cell-to-cell mobile.
TAIR Short Description: peroxidase CA
TAIR Aliases: ATPCA, ATPRX33, PRX33, PRXCA
Gene
Length: 5342  
Chromosome Location: Chr2: 8631959-8637300
Organism . Short Name: A. thaliana
TAIR Computational Description: CDC27 family protein;(source:Araport11)
TAIR Curator Summary: Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.
TAIR Short Description: CDC27 family protein
TAIR Aliases: CDC27b, HBT
Gene
Length: 2591  
Chromosome Location: Chr5: 7835965-7838555
Organism . Short Name: A. thaliana
TAIR Computational Description: K-box region and MADS-box transcription factor family protein;(source:Araport11)
TAIR Curator Summary: Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. Plays a maternal role in fertilization and seed development.
TAIR Short Description: K-box region and MADS-box transcription factor family protein
TAIR Aliases: ABS, AGL32, TT16
Gene
Length: 2563  
Chromosome Location: Chr4: 10896579-10899141
Organism . Short Name: A. thaliana
TAIR Computational Description: glycosyltransferase family protein (DUF23);(source:Araport11)
TAIR Curator Summary: Together with GALS1 and GALS2 involved in the accumulation of b-1,4-galactan in the cell walls during cold acclimation. The gals1 gals2 gals3 triple mutant, which has reduced b-1,4-galactan in the cell wall, exhibited impaired freezing tolerance.
TAIR Short Description: Domain of unknown function (DUF23)
TAIR Aliases: GALS3
Gene
Length: 2482  
Chromosome Location: Chr2: 14216771-14219252
Organism . Short Name: A. thaliana
TAIR Computational Description: glycosyltransferase family protein (DUF23);(source:Araport11)
TAIR Curator Summary: Together with GALS2 and GALS3 involved in the accumulation of b-1,4-galactan in the cell walls during cold acclimation. The gals1 gals2 gals3 triple mutant, which has reduced b-1,4-galactan in the cell wall, exhibited impaired freezing tolerance.
TAIR Short Description: Domain of unknown function (DUF23)
TAIR Aliases: GALS1
Gene
Length: 4156  
Chromosome Location: Chr1: 594502-598657
Organism . Short Name: A. thaliana
TAIR Computational Description: cellulose synthase-like D5;(source:Araport11)
TAIR Curator Summary: Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.It's expression is cell cycle dependent and it appears to function in cell plate formation.
TAIR Short Description: cellulose synthase-like D5
TAIR Aliases: ATCSLD5, CSLD5, SOS6
Gene
Length: 2604  
Chromosome Location: Chr5: 18018905-18021508
Organism . Short Name: A. thaliana
TAIR Computational Description: glycosyltransferase family protein (DUF23);(source:Araport11)
TAIR Curator Summary: Together with GALS1 and GALS3 involved in the accumulation of b-1,4-galactan in the cell walls during cold acclimation. The gals1 gals2 gals3 triple mutant, which has reduced b-1,4-galactan in the cell wall, exhibited impaired freezing tolerance.
TAIR Short Description: Domain of unknown function (DUF23)
TAIR Aliases: GALS2
Gene
Length: 1821  
Chromosome Location: Chr5: 361081-362901
Organism . Short Name: A. thaliana
TAIR Computational Description: Glycosyl hydrolase superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a endo-beta-mannanase involved in seed germination and the formation of cell walls in vascular tissues
TAIR Short Description: Glycosyl hydrolase superfamily protein
TAIR Aliases: AtMAN6, MAN6
Gene
Length: 4856  
Chromosome Location: Chr5: 8045540-8050395
Organism . Short Name: A. thaliana
TAIR Computational Description: Pectinacetylesterase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves.
TAIR Short Description: Pectinacetylesterase family protein
TAIR Aliases: PAE9
Gene
Length: 5357  
Chromosome Location: Chr2: 9599420-9604776
Organism . Short Name: A. thaliana
TAIR Computational Description: Di-glucose binding protein with Kinesin motor domain-containing protein;(source:Araport11)
TAIR Curator Summary: Malectin domain kinesin. Possible role in cell division, with a possible secondary function in the nuclei.
TAIR Short Description: Di-glucose binding protein with Kinesin motor domain
TAIR Aliases: MDKIN2
Gene
Length: 3546  
Chromosome Location: Chr1: 4494924-4498469
Organism . Short Name: A. thaliana
TAIR Computational Description: Actin-like ATPase superfamily protein;(source:Araport11)
TAIR Curator Summary: Mutant has defect in trichome cell expansion and actin organization resulting in a distorted trichome phenotype.
TAIR Short Description: Actin-like ATPase superfamily protein
TAIR Aliases: ARP3, ATARP3, DIS1
Gene
Length: 2945  
Chromosome Location: Chr2: 19283456-19286400
Organism . Short Name: A. thaliana
TAIR Computational Description: Pectinacetylesterase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves.
TAIR Short Description: Pectinacetylesterase family protein
TAIR Aliases: PAE3
Gene
Length: 2443  
Chromosome Location: Chr3: 229075-231517
Organism . Short Name: A. thaliana
TAIR Computational Description: NAC domain containing protein 44;(source:Araport11)
TAIR Curator Summary: Promotes growth arrest and programmed cell death; accumulates after the initial recruitment of RBR to foci.
TAIR Short Description: NAC domain containing protein 44
TAIR Aliases: anac044, NAC044
Gene
Length: 2830  
Chromosome Location: Chr3: 6105908-6108737
Organism . Short Name: A. thaliana
TAIR Computational Description: receptor-like kinase 902;(source:Araport11)
TAIR Curator Summary: Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.
TAIR Short Description: receptor-like kinase 902
TAIR Aliases: RLK902
Gene
Length: 8953  
Chromosome Location: Chr3: 6948774-6957726
Organism . Short Name: A. thaliana
TAIR Computational Description: myosin 1;(source:Araport11)
TAIR Curator Summary: Class VIII myosin involved in sucrose and auxin stimulated cell division.Localized to plasma membrane and plasmodesmata.
TAIR Short Description: myosin 1
TAIR Aliases: ATM1
Gene
Length: 3241  
Chromosome Location: Chr1: 17557091-17560331
Organism . Short Name: A. thaliana
TAIR Computational Description: Serine protease inhibitor (SERPIN) family protein;(source:Araport11)
TAIR Curator Summary: Inhibitor of pro-apoptotic proteases, which is involved in the regulation of the programmed cell death induction.
TAIR Short Description: Serine protease inhibitor (SERPIN) family protein
TAIR Aliases: AtSERPIN1, SERPIN1
Gene
Length: 3384  
Chromosome Location: Chr1: 20719473-20722856
Organism . Short Name: A. thaliana
TAIR Computational Description: evolutionarily conserved C-terminal region 4;(source:Araport11)
TAIR Curator Summary: YTHDF protein which togeteher with ECT2 and ECT3 is involved in cell proliferation during plant organogenesis.
TAIR Short Description: evolutionarily conserved C-terminal region 4
TAIR Aliases: ECT4
Gene
Length: 3174  
Chromosome Location: Chr3: 16863088-16866261
Organism . Short Name: A. thaliana
TAIR Computational Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 4;(source:Araport11)
TAIR Curator Summary: Encodes a cysteine-rich receptor-like protein kinase. Involved in programmed cell death and defense response to pathogen.
TAIR Short Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 4
TAIR Aliases: CRK4
Gene
Length: 3942  
Chromosome Location: Chr3: 23042212-23046153
Organism . Short Name: A. thaliana
TAIR Computational Description: HCO3- transporter family;(source:Araport11)
TAIR Curator Summary: BOR2 is involved in efficient borate crosslinking of rhamnogalacturonan II in cell walls under boron limitation.
TAIR Short Description: HCO3- transporter family
TAIR Aliases: BOR2
Gene
Length: 3453  
Chromosome Location: Chr4: 2224422-2227874
Organism . Short Name: A. thaliana
TAIR Computational Description: Saposin-like aspartyl protease family protein;(source:Araport11)
TAIR Curator Summary: Developmental programmed cell death associated gene, downstream target of downstream targets of SMB, ANAC087, and ANAC046.
TAIR Short Description: Saposin-like aspartyl protease family protein
TAIR Aliases: AtPaspA3, PaspA3
Gene
Length: 2903  
Chromosome Location: Chr4: 7487225-7490127
Organism . Short Name: A. thaliana
TAIR Computational Description: MutT/nudix family protein;(source:Araport11)
TAIR Curator Summary: Encodes a protein with ADP-ribose hydrolase activity. Negatively regulates EDS1-conditioned plant defense and programmed cell death.
TAIR Short Description: MutT/nudix family protein
TAIR Aliases: AtNUDT7, GFG1, NUDT7
Gene
Length: 2943  
Chromosome Location: Chr5: 24556994-24559936
Organism . Short Name: A. thaliana
TAIR Computational Description: evolutionarily conserved C-terminal region 3;(source:Araport11)
TAIR Curator Summary: YTHDF protein which togeteher with ECT2 and ECT4 is involved in cell proliferation during plant organogenesis.
TAIR Short Description: evolutionarily conserved C-terminal region 3
TAIR Aliases: ECT3
Gene
Length: 4278  
Chromosome Location: Chr5: 24934962-24939239
Organism . Short Name: A. thaliana
TAIR Computational Description: SEUSS-like 2;(source:Araport11)
TAIR Curator Summary: Encodes a protein that functions with LUH to promote Al binding to the root cell wall.
TAIR Short Description: SEUSS-like 2
TAIR Aliases: SLK2
Gene
Length: 5407  
Chromosome Location: Chr2: 505375-510781
Organism . Short Name: A. thaliana
TAIR Computational Description: indeterminate(ID)-domain 5;(source:Araport11)
TAIR Curator Summary: RAVEN is part of the network regulated by BLJUEJAY, JACKDAW, SACRECROW and SHORT-ROOT to regulate root tissue patterning through cell lineage specification and asymmetric cell division. RAVEN is directly activated by SHORT-ROOT and directly repressed by JACKDAW.
TAIR Short Description: indeterminate(ID)-domain 5
TAIR Aliases: AtIDD5, IDD5, RVN
Gene
Length: 2828  
Chromosome Location: Chr5: 23915440-23918267
Organism . Short Name: A. thaliana
TAIR Computational Description: UDP-glucuronic acid decarboxylase 3;(source:Araport11)
TAIR Curator Summary: Encodes a cytosolic isoform of UDP-glucuronic acid decarboxylase. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.
TAIR Short Description: UDP-glucuronic acid decarboxylase 3
TAIR Aliases: ATUXS3, UXS3
Gene
Length: 3686  
Chromosome Location: Chr1: 19963267-19966952
Organism . Short Name: A. thaliana
TAIR Computational Description: RING/U-box superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes HEI10, a RING finger-containing protein. HEI10 belongs to a group of proteins well conserved among species known as ZMM. Required for class I crossover formation. The mRNA is cell-to-cell mobile.
TAIR Short Description: RING/U-box superfamily protein
TAIR Aliases: HEI10
Gene
Length: 3053  
Chromosome Location: Chr3: 17089013-17092065
Organism . Short Name: A. thaliana
TAIR Computational Description: UDP-XYL synthase 5;(source:Araport11)
TAIR Curator Summary: Encodes a cytosolic isoform of UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.
TAIR Short Description: UDP-XYL synthase 5
TAIR Aliases: UXS5
Gene
Length: 2683  
Chromosome Location: Chr3: 18207651-18210333
Organism . Short Name: A. thaliana
TAIR Computational Description: peroxidase CB;(source:Araport11)
TAIR Curator Summary: Class III peroxidase Perx34. Expressed in roots, leaves and stems. Located in the cell wall. Involved in cell elongation. Expression activated by light. May play a role in generating H2O2 during defense response. The mRNA is cell-to-cell mobile.
TAIR Short Description: peroxidase CB
TAIR Aliases: ATPCB, ATPERX34, AtPRX34, PERX34, PRX34, PRXCB
Gene
Length: 3039  
Chromosome Location: Chr3: 19841374-19844412
Organism . Short Name: A. thaliana
TAIR Computational Description: UDP-glucuronic acid decarboxylase 1;(source:Araport11)
TAIR Curator Summary: Encodes a Golgi localized isoform of UDP-glucuronic acid decarboxylase. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.
TAIR Short Description: UDP-glucuronic acid decarboxylase 1
TAIR Aliases: ATUXS1, UXS1
Gene
Length: 3296  
Chromosome Location: Chr3: 23232272-23235567
Organism . Short Name: A. thaliana
TAIR Computational Description: NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a Golgi localized isoform of UDP-glucuronic acid decarboxylase. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.
TAIR Short Description: NAD(P)-binding Rossmann-fold superfamily protein
TAIR Aliases: ATUXS2, AUD1, UXS2
Gene
Length: 2074  
Chromosome Location: Chr5: 19135952-19138025
Organism . Short Name: A. thaliana
TAIR Computational Description: BAX inhibitor 1;(source:Araport11)
TAIR Curator Summary: Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta. The mRNA is cell-to-cell mobile.
TAIR Short Description: BAX inhibitor 1
TAIR Aliases: ATBI-1, ATBI1, BI-1, BI1
Gene
Length: 1196  
Chromosome Location: Chr5: 19738646-19739841
Organism . Short Name: A. thaliana
TAIR Computational Description: AGAMOUS-like 80;(source:Araport11)
TAIR Curator Summary: AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.
TAIR Short Description: AGAMOUS-like 80
TAIR Aliases: AGL80, FEM111
Gene
Length: 2173  
Chromosome Location: Chr4: 16369357-16371529
Organism . Short Name: A. thaliana
TAIR Computational Description: Cyclase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a cyclase-family protein that is a negative regulator of cell death that regulates pathogen-induced symptom development.
TAIR Short Description: Cyclase family protein
TAIR Aliases: CYCLASE1
Gene
Length: 2281  
Chromosome Location: Chr5: 1461786-1464066
Organism . Short Name: A. thaliana
TAIR Computational Description: Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11)
TAIR Curator Summary: Encodes a protein that modulates the activity of pectin methylesterase within the cell wall; pectin methylesterase inhibitor.
TAIR Short Description: Plant invertase/pectin methylesterase inhibitor superfamily
TAIR Aliases: PME46, PMEI-PME46
Gene
Length: 1938  
Chromosome Location: Chr5: 7375839-7377776
Organism . Short Name: A. thaliana
TAIR Computational Description: NAC domain containing protein 89;(source:Araport11)
TAIR Curator Summary: Encodes ANAC089, a membrane-tethered transcription factor that negatively regulates floral initiation. Also controls ER-stress-induced programmed cell death.
TAIR Short Description: NAC domain containing protein 89
TAIR Aliases: anac089, FSQ6, NAC089, NTL14
Gene
Length: 5844  
Chromosome Location: Chr1: 27268092-27273935
Organism . Short Name: A. thaliana
TAIR Computational Description: CCAAT-binding factor;(source:Araport11)
TAIR Curator Summary: Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development.
TAIR Short Description: CCAAT-binding factor
TAIR Aliases: EDA25, SWA2
Gene
Length: 1363  
Chromosome Location: Chr2: 12956445-12957807
Organism . Short Name: A. thaliana
TAIR Computational Description: ovate family protein 2;(source:Araport11)
TAIR Curator Summary: Part of a transcription repressor complex with OFP1/4?MYB75?KNAT7?BLH6; controls histone deacetylation resulting in xylem vessel cell differentiation.
TAIR Short Description: ovate family protein 2
TAIR Aliases: ATOFP2, OFP2
Gene
Length: 7626  
Chromosome Location: Chr1: 2359111-2366736
Organism . Short Name: A. thaliana
TAIR Computational Description: Leucine-rich repeat transmembrane protein kinase;(source:Araport11)
TAIR Curator Summary: Leucine-rich repeat receptor-like kinase with extracellular malectin-like domain, which possesses cell death induction activity in plant leaves.
TAIR Short Description: Leucine-rich repeat transmembrane protein kinase
TAIR Aliases: LMK1
Gene
Length: 3284  
Chromosome Location: Chr1: 10828373-10831656
Organism . Short Name: A. thaliana
TAIR Computational Description: hercules receptor kinase 2;(source:Araport11)
TAIR Curator Summary: Encodes HERCULES2 (HERK2), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.
TAIR Short Description: hercules receptor kinase 2
TAIR Aliases: HERK2
Gene
Length: 3598  
Chromosome Location: Chr2: 16878901-16882498
Organism . Short Name: A. thaliana
TAIR Computational Description: Nop53 protein;(source:Araport11)
TAIR Curator Summary: Encodes a homolog of yeast NOP53 that is an important regulator of cell division during organ growth.
TAIR Short Description: NULL
TAIR Aliases: SMO4
Gene
Length: 2343  
Chromosome Location: Chr3: 1753289-1755631
Organism . Short Name: A. thaliana
TAIR Computational Description: anaphase-promoting complex/cyclosome 11;(source:Araport11)
TAIR Curator Summary: Subunit of the anaphase promoting complex, a ubiquitin ligase complex that regulates progression through the cell cycle.
TAIR Short Description: anaphase-promoting complex/cyclosome 11
TAIR Aliases: APC11, ZGY1, ZYG1
Gene
Length: 3153  
Chromosome Location: Chr3: 4532762-4535914
Organism . Short Name: A. thaliana
TAIR Computational Description: Glycosyl hydrolases family 32 protein;(source:Araport11)
TAIR Curator Summary: Encodes a protein with invertase activity. Cell wall invertase; involved in pollen development and pollen tube growth.
TAIR Short Description: Glycosyl hydrolases family 32 protein
TAIR Aliases: ATBFRUCT1, AtCWI1, ATCWINV1, CWI1, CWIN1
Gene
Length: 1313  
Chromosome Location: Chr4: 735653-736965
Organism . Short Name: A. thaliana
TAIR Computational Description: ARP2/3 complex 16 kDa subunit (p16-Arc);(source:Araport11)
TAIR Curator Summary: belongs to the DIS(distorted) gene family. Encodes a actin polymerization factor. Involved in cell expansion of trichome.
TAIR Short Description: ARP2/3 complex 16 kDa subunit (p16-Arc)
TAIR Aliases: ARPC5, CRK