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Search results 201 to 300 out of 6293 for Single Nucleotide Polymorphism

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0.037s

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Hits by Organism

Type Details Score
Gene
AT3G57610 | locus:2076606 | ADSS | adenylosuccinate synthase
Length: 2530  
Chromosome Location: Chr3: 21334191-21336720
Organism . Short Name: A. thaliana
TAIR Computational Description: adenylosuccinate synthase;(source:Araport11)
TAIR Curator Summary: encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate)
TAIR Short Description: adenylosuccinate synthase
TAIR Aliases: ADSS
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Gene
AT2G07020 | locus:2063601 | AT2G07020 | -
 
Length: 2726  
Chromosome Location: Chr2: 2908473-2911198
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT2G16750 | locus:2059919 | AT2G16750 | -
 
Length: 3743  
Chromosome Location: Chr2: 7271012-7274754
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT2G24370 | locus:2061012 | AT2G24370 | -
 
Length: 3965  
Chromosome Location: Chr2: 10369418-10373382
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT3G13690 | locus:2091511 | AT3G13690 | -
 
Length: 4798  
Chromosome Location: Chr3: 4485623-4490420
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT3G20200 | locus:2087610 | AT3G20200 | -
 
Length: 3974  
Chromosome Location: Chr3: 7047409-7051382
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT3G23145 | locus:2829295 | AT3G23145 | -
 
Length: 1059  
Chromosome Location: Chr3: 8252138-8253196
Organism . Short Name: A. thaliana
TAIR Computational Description: ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: zinc ion binding;isoleucine-tRNA ligases;ATP binding;aminoacyl-tRNA ligases;nucleotide binding
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Gene
AT3G42723 | locus:504955786 | AT3G42723 | -
 
Length: 2798  
Chromosome Location: Chr3: 14838392-14841189
Organism . Short Name: A. thaliana
TAIR Computational Description: ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: aminoacyl-tRNA ligases;ATP binding;nucleotide binding
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Gene
AT4G31230 | locus:2128131 | AT4G31230 | -
 
Length: 4061  
Chromosome Location: Chr4: 15172232-15176292
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT5G12000 | locus:2143094 | AT5G12000 | -
 
Length: 3206  
Chromosome Location: Chr5: 3873799-3877004
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT1G16760 | locus:2015656 | AT1G16760 | -
 
Length: 3515  
Chromosome Location: Chr1: 5734190-5737704
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT1G17540 | locus:2007908 | AT1G17540 | -
 
Length: 3723  
Chromosome Location: Chr1: 6029138-6032860
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT1G21590 | locus:2026957 | AT1G21590 | -
 
Length: 3786  
Chromosome Location: Chr1: 7566229-7570014
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT1G55200 | locus:2035686 | AT1G55200 | -
 
Length: 3872  
Chromosome Location: Chr1: 20589129-20593000
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT1G77280 | locus:2195975 | AT1G77280 | -
 
Length: 3825  
Chromosome Location: Chr1: 29030998-29034822
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT1G78940 | locus:2207325 | AT1G78940 | -
 
Length: 3399  
Chromosome Location: Chr1: 29680782-29684180
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT5G35380 | locus:2182613 | AT5G35380 | -
 
Length: 2972  
Chromosome Location: Chr5: 13593322-13596293
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT5G63940 | locus:2160801 | AT5G63940 | -
 
Length: 3485  
Chromosome Location: Chr5: 25587998-25591482
Organism . Short Name: A. thaliana
TAIR Computational Description: kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
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Gene
AT2G24610 | locus:2046703 | CNGC14 | cyclic nucleotide-gated channel 14
Length: 3693  
Chromosome Location: Chr2: 10456879-10460571
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-gated channel 14;(source:Araport11)
TAIR Curator Summary: Member of Cyclic nucleotide gated channel family; a plasma membrane localized Ca2+ channel, which is required for the normal growth of Arabidopsis root hair tip.
TAIR Short Description: cyclic nucleotide-gated channel 14
TAIR Aliases: ATCNGC14, CNGC14
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Gene
AT4G24040 | locus:2134961 | TRE1 | trehalase 1
Length: 3259  
Chromosome Location: Chr4: 12488040-12491298
Organism . Short Name: A. thaliana
TAIR Computational Description: trehalase 1;(source:Araport11)
TAIR Curator Summary: Encodes a trehalase, member of Glycoside Hydrolase Family 37. Two isoforms, produced from a single transcript, regulate drought stress tolerance.
TAIR Short Description: trehalase 1
TAIR Aliases: ATTRE1, TRE1
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Gene
AT1G14410 | locus:2012542 | WHY1 | WHIRLY 1
Length: 2160  
Chromosome Location: Chr1: 4928921-4931080
Organism . Short Name: A. thaliana
TAIR Computational Description: ssDNA-binding transcriptional regulator;(source:Araport11)
TAIR Curator Summary: Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.
TAIR Short Description: ssDNA-binding transcriptional regulator
TAIR Aliases: ATWHY1, PTAC1, WHY1
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Gene
AT1G09300 | locus:2203038 | AT1G09300 | -
Length: 4887  
Chromosome Location: Chr1: 3003495-3008381
Organism . Short Name: A. thaliana
TAIR Computational Description: Metallopeptidase M24 family protein;(source:Araport11)
TAIR Curator Summary: Encodes a mitochondrial protease ICP55. Alters the stability of proteins by removal of a single amino acid from their sequence.
TAIR Short Description: Metallopeptidase M24 family protein
TAIR Aliases: AtICP55
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Gene
AT5G61770 | locus:2159213 | PPAN | PETER PAN-like protein
Length: 2188  
Chromosome Location: Chr5: 24815541-24817728
Organism . Short Name: A. thaliana
TAIR Computational Description: PETER PAN-like protein;(source:Araport11)
TAIR Curator Summary: A single-copy gene encoding a 346 aa protein with a single Brix domain. Similar to yeast ribosome biogenesis proteins Ssf1/2.
TAIR Short Description: PETER PAN-like protein
TAIR Aliases: PPAN, SNAIL1
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Publication
10742055
First Author: Savolainen O
Title: Contrasting patterns of nucleotide polymorphism at the alcohol dehydrogenase locus in the outcrossing Arabidopsis lyrata and the selfing Arabidopsis thaliana.
Year: 2000
Journal: Mol Biol Evol
Volume: 17
Pages: 645-55
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Gene
AT1G79860 | locus:2017844 | ROPGEF12 | ROP (rho of plants) guanine nucleotide exchange factor 12
Length: 2309  
Chromosome Location: Chr1: 30041989-30044297
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 12;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 12
TAIR Aliases: ATROPGEF12, MEE64, ROPGEF12
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Gene
AT3G27260 | locus:2086498 | GTE8 | global transcription factor group E8
Length: 5232  
Chromosome Location: Chr3: 10067529-10072760
Organism . Short Name: A. thaliana
TAIR Computational Description: global transcription factor group E8;(source:Araport11)
TAIR Curator Summary: Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain
TAIR Short Description: global transcription factor group E8
TAIR Aliases: GTE8
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Gene
AT4G21585 | locus:504955531 | ENDO4 | endonuclease 4
Length: 2366  
Chromosome Location: Chr4: 11477814-11480179
Organism . Short Name: A. thaliana
TAIR Computational Description: endonuclease 4;(source:Araport11)
TAIR Curator Summary: Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.
TAIR Short Description: endonuclease 4
TAIR Aliases: ENDO4
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SO Term
SO:0000441 | ss_oligo
Description: A single stranded oligonucleotide.
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SO Term
SO:0000757 | single_stranded_cDNA
Description: DNA synthesized from RNA by reverse transcriptase, single stranded.
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Protein
Q84V89_ARATH | Q84V89
Organism . Name: Arabidopsis thaliana
Length: 213  
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Protein
A0A178VUT2_ARATH | A0A178VUT2
Organism . Name: Arabidopsis thaliana
Length: 269  
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Protein
A0A5S9WX26_ARATH | A0A5S9WX26
Organism . Name: Arabidopsis thaliana
Length: 259  
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Protein
A0A5S9WXB2_ARATH | A0A5S9WXB2
Organism . Name: Arabidopsis thaliana
Length: 486  
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Protein
A0A654F2Q5_ARATH | A0A654F2Q5
Organism . Name: Arabidopsis thaliana
Length: 259  
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Protein
A0A654FZB3_ARATH | A0A654FZB3
Organism . Name: Arabidopsis thaliana
Length: 454  
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Gene
AT3G63160 | locus:2077224 | OEP6 | outer envelope protein 6
Length: 636  
Chromosome Location: Chr3: 23333399-23334034
Organism . Short Name: A. thaliana
TAIR Computational Description: outer envelope membrane protein;(source:Araport11)
TAIR Curator Summary: Member of the Arabidopsis 7-kDa OEP family. Tail-anchored (TA) membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids.
TAIR Short Description: NULL
TAIR Aliases: OEP6, OEP7.2
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Gene
AT1G16000 | locus:2200512 | AT1G16000 | -
Length: 827  
Chromosome Location: Chr1: 5494533-5495359
Organism . Short Name: A. thaliana
TAIR Computational Description: GAG1At protein;(source:Araport11)
TAIR Curator Summary: Member of the Arabidopsis 7-kDa OEP family. Tail-anchored (TA) membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids.
TAIR Short Description: NULL
TAIR Aliases: OEP9.1
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Ontology Term Synonym
Ontology Term Synonym
Name: consensus amplified fragment length polymorphism fragment
Type: synonym
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Gene
AT2G28260 | locus:2062814 | CNGC15 | cyclic nucleotide-gated channel 15
Length: 3201  
Chromosome Location: Chr2: 12049443-12052643
Organism . Short Name: A. thaliana
TAIR Computational Description: cyclic nucleotide-gated channel 15;(source:Araport11)
TAIR Curator Summary: Cyclic nucleotide gated channel family member, involved in response to calcium and nitrate induced calcium signaling.Forms a membrane complex with NRT1.1 that couples nitrogen sensing with Ca2+ signaling.
TAIR Short Description: cyclic nucleotide-gated channel 15
TAIR Aliases: ATCNGC15, CNGC15
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Protein Domain
IPR006899
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Gene
AT2G21650 | locus:2049374 | MEE3 | MATERNAL EFFECT EMBRYO ARREST 3
Length: 1187  
Chromosome Location: Chr2: 9259511-9260697
Organism . Short Name: A. thaliana
TAIR Computational Description: Homeodomain-like superfamily protein;(source:Araport11)
TAIR Curator Summary: RSM1 is a member of a small sub-family of single MYB transcription factors. Analysis of overexpressin lines indicate its involvement during early morphogenesis.
TAIR Short Description: Homeodomain-like superfamily protein
TAIR Aliases: ATRL2, MEE3, RSM1
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Gene
AT3G50410 | locus:2074850 | OBP1 | OBF binding protein 1
Length: 1224  
Chromosome Location: Chr3: 18709613-18710836
Organism . Short Name: A. thaliana
TAIR Computational Description: OBF binding protein 1;(source:Araport11)
TAIR Curator Summary: Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development.
TAIR Short Description: OBF binding protein 1
TAIR Aliases: DOF3.4, OBP1
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Gene
AT3G07040 | locus:2077572 | RPM1 | RESISTANCE TO P. SYRINGAE PV MACULICOLA 1
Length: 3701  
Chromosome Location: Chr3: 2225855-2229555
Organism . Short Name: A. thaliana
TAIR Computational Description: NB-ARC domain-containing disease resistance protein;(source:Araport11)
TAIR Curator Summary: Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.
TAIR Short Description: NB-ARC domain-containing disease resistance protein
TAIR Aliases: RPM1, RPS3
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Ontology Term Synonym
Ontology Term Synonym
Name: single strand overhang
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: single strand oligo
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: single strand oligonucleotide
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: single stranded oligonucleotide
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: single strand cDNA
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: single stranded cDNA
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: single organism localization
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: single organism signaling
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: single organism process
Type: synonym
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Protein Domain
IPR008373
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Gene
AT2G31085 | locus:505006281 | CLE6 | CLAVATA3/ESR-RELATED 6
Length: 708  
Chromosome Location: Chr2: 13254152-13254859
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 6;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can replace CLV3 function in vivo.
TAIR Short Description: CLAVATA3/ESR-RELATED 6
TAIR Aliases: AtCLE6, CLE6
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Gene
AT1G73165 | locus:504956162 | CLE1 | CLAVATA3/ESR-RELATED 1
Length: 829  
Chromosome Location: Chr1: 27508444-27509272
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 1;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can replace CLV3 function in vivo.
TAIR Short Description: CLAVATA3/ESR-RELATED 1
TAIR Aliases: CLE1
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Gene
AT5G15400 | locus:2180862 | AT5G15400 | -
Length: 5765  
Chromosome Location: Chr5: 4997489-5003253
Organism . Short Name: A. thaliana
TAIR Computational Description: U-box domain-containing protein;(source:Araport11)
TAIR Curator Summary: Single copy gene encoding a putative ubiquitin conjugating E4 factor. Contains Ub elongating factor core domain and C-terminal U-box. Involved in ubiquitination of NLRs.
TAIR Short Description: U-box domain-containing protein
TAIR Aliases: MUSE3, UFD2
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Gene
AT3G19770 | locus:2092211 | VPS9A | -
Length: 2785  
Chromosome Location: Chr3: 6866717-6869501
Organism . Short Name: A. thaliana
TAIR Computational Description: Vacuolar sorting protein 9 (VPS9) domain-containing protein;(source:Araport11)
TAIR Curator Summary: Guanine nucleotide exchange factor VPS9a. Can activate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development.
TAIR Short Description: Vacuolar sorting protein 9 (VPS9) domain
TAIR Aliases: ATVPS9A, VPS9, VPS9A
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Gene
AT1G30620 | locus:2204639 | MUR4 | MURUS 4
Length: 3764  
Chromosome Location: Chr1: 10854517-10858280
Organism . Short Name: A. thaliana
TAIR Computational Description: NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)
TAIR Curator Summary: encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.
TAIR Short Description: NAD(P)-binding Rossmann-fold superfamily protein
TAIR Aliases: HSR8, MUR4, UXE1
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GO Term
GO:0007338 | single fertilization
Description: The union of male and female gametes to form a zygote.
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Protein
PNC2_ARATH | Q8VZS0
Organism . Name: Arabidopsis thaliana
Length: 321  
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Protein
PNC1_ARATH | Q9MA90
Organism . Name: Arabidopsis thaliana
Length: 322  
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Protein
BRT1_ARATH | Q9SUV1
Organism . Name: Arabidopsis thaliana
Length: 392  
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Protein
ADNT1_ARATH | O04619
Organism . Name: Arabidopsis thaliana
Length: 352  
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Protein
A0A178UJK0_ARATH | A0A178UJK0
Organism . Name: Arabidopsis thaliana
Length: 1133  
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Protein
A0A1P8AVR5_ARATH | A0A1P8AVR5
Organism . Name: Arabidopsis thaliana
Length: 542  
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Protein
A0A5S9YBZ7_ARATH | A0A5S9YBZ7
Organism . Name: Arabidopsis thaliana
Length: 1134  
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Protein
A0A654F5W8_ARATH | A0A654F5W8
Organism . Name: Arabidopsis thaliana
Length: 322  
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Protein
A0A654G918_ARATH | A0A654G918
Organism . Name: Arabidopsis thaliana
Length: 1134  
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Protein
A0A7G2FHK9_ARATH | A0A7G2FHK9
Organism . Name: Arabidopsis thaliana
Length: 1085  
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Protein
A0A178UJW0_ARATH | A0A178UJW0
Organism . Name: Arabidopsis thaliana
Length: 413  
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Protein
A0A178V9T1_ARATH | A0A178V9T1
Organism . Name: Arabidopsis thaliana
Length: 344  
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Protein
A0A178VGY2_ARATH | A0A178VGY2
Organism . Name: Arabidopsis thaliana
Length: 296  
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Protein
A0A178WAX4_ARATH | A0A178WAX4
Organism . Name: Arabidopsis thaliana
Length: 418  
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Protein
A0A1I9LMT8_ARATH | A0A1I9LMT8
Organism . Name: Arabidopsis thaliana
Length: 520  
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Protein
A0A1I9LMT9_ARATH | A0A1I9LMT9
Organism . Name: Arabidopsis thaliana
Length: 642  
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Protein
A0A1P8B1R5_ARATH | A0A1P8B1R5
Organism . Name: Arabidopsis thaliana
Length: 244  
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Protein
A0A1P8B1R6_ARATH | A0A1P8B1R6
Organism . Name: Arabidopsis thaliana
Length: 208  
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Protein
A0A2H1ZEA3_ARATH | A0A2H1ZEA3
Organism . Name: Arabidopsis thaliana
Length: 354  
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Protein
A0A5S9XPN0_ARATH | A0A5S9XPN0
Organism . Name: Arabidopsis thaliana
Length: 352  
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Protein
A0A5S9YHD2_ARATH | A0A5S9YHD2
Organism . Name: Arabidopsis thaliana
Length: 452  
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Protein
A0A654GE64_ARATH | A0A654GE64
Organism . Name: Arabidopsis thaliana
Length: 452  
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Protein
A0A7G2EDK6_ARATH | A0A7G2EDK6
Organism . Name: Arabidopsis thaliana
Length: 485  
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Gene
AT2G33330 | locus:2051089 | PDLP3 | plasmodesmata-located protein 3
Length: 2721  
Chromosome Location: Chr2: 14122806-14125526
Organism . Short Name: A. thaliana
TAIR Computational Description: plasmodesmata-located protein 3;(source:Araport11)
TAIR Curator Summary: Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.
TAIR Short Description: plasmodesmata-located protein 3
TAIR Aliases: PDLP3
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Gene
AT5G12235 | locus:504954845 | CLE22 | CLAVATA3/ESR-RELATED 22
Length: 609  
Chromosome Location: Chr5: 3957521-3958129
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 22;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo.
TAIR Short Description: CLAVATA3/ESR-RELATED 22
TAIR Aliases: CLE22
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Gene
AT1G26600 | locus:2197905 | CLE9 | CLAVATA3/ESR-RELATED 9
Length: 1088  
Chromosome Location: Chr1: 9191503-9192590
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 9;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo.
TAIR Short Description: CLAVATA3/ESR-RELATED 9
TAIR Aliases: CLE9
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Gene
AT1G49005 | locus:504956243 | CLE11 | CLAVATA3/ESR-RELATED 11
Length: 2999  
Chromosome Location: Chr1: 18128524-18131522
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 11;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo.
TAIR Short Description: CLAVATA3/ESR-RELATED 11
TAIR Aliases: CLE11
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Gene
AT1G69970 | locus:2020683 | CLE26 | CLAVATA3/ESR-RELATED 26
Length: 2051  
Chromosome Location: Chr1: 26352563-26354613
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 26;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo.
TAIR Short Description: CLAVATA3/ESR-RELATED 26
TAIR Aliases: CLE26
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Gene
AT1G73965 | locus:504956232 | CLE13 | CLAVATA3/ESR-RELATED 13
Length: 842  
Chromosome Location: Chr1: 27815627-27816468
Organism . Short Name: A. thaliana
TAIR Computational Description: CLAVATA3/ESR-RELATED 13;(source:Araport11)
TAIR Curator Summary: Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo.
TAIR Short Description: CLAVATA3/ESR-RELATED 13
TAIR Aliases: CLE13
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Gene
AT5G54440 | locus:2147324 | CLUB | CLUB
Length: 8086  
Chromosome Location: Chr5: 22099764-22107849
Organism . Short Name: A. thaliana
TAIR Computational Description: CLUB;(source:Araport11)
TAIR Curator Summary: Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis. Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.
TAIR Short Description: CLUB
TAIR Aliases: AtTRS130, CLUB, TRAPPC10, TRS130
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: MSH2 shapes the meiotic crossover landscape in relation to interhomolog polymorphism in Arabidopsis.
Organism: A. thaliana
Gene: MSH2
PubMed Id: 32935357
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Gene
AT1G70730 | locus:2033583 | PGM2 | phosphoglucomutase 2
Length: 4521  
Chromosome Location: Chr1: 26668646-26673166
Organism . Short Name: A. thaliana
TAIR Computational Description: Phosphoglucomutase/phosphomannomutase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.
TAIR Short Description: Phosphoglucomutase/phosphomannomutase family protein
TAIR Aliases: PGM2
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Gene
AT1G10480 | locus:2194599 | ZFP5 | zinc finger protein 5
Length: 1660  
Chromosome Location: Chr1: 3449567-3451226
Organism . Short Name: A. thaliana
TAIR Computational Description: zinc finger protein 5;(source:Araport11)
TAIR Curator Summary: Encodes a zinc finger protein containing only a single zinc finger that acts downstream of ZFP6 in regulating trichome development by integrating GA and cytokinin signaling.
TAIR Short Description: zinc finger protein 5
TAIR Aliases: ZFP5
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Gene
AT5G52360 | locus:2156727 | ADF10 | actin depolymerizing factor 10
Length: 1475  
Chromosome Location: Chr5: 21257934-21259408
Organism . Short Name: A. thaliana
TAIR Computational Description: actin depolymerizing factor 10;(source:Araport11)
TAIR Curator Summary: ADF10 is an actin-depolymerizing factor that preferentially binds ADP-G-actin and inhibits G-actin nucleotide exchange. ADF10 promotes actin turnover in pollen , regulating organization of actin filaments and vesicle trafficking during pollen tube growth.
TAIR Short Description: actin depolymerizing factor 10
TAIR Aliases: ADF10
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Gene
AT2G45890 | locus:2050699 | ROPGEF4 | ROP (rho of plants) guanine nucleotide exchange factor 4
Length: 2353  
Chromosome Location: Chr2: 18883377-18885729
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 4;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Mutants exhibit longer root hairs under phosphate-deficient conditions. Involved in cell wall patterning. Encodes ROP activator, regulates the formation of ROP-activated domains; these in turn determine the pattern of cell wall pits. Forms a dimer that interacts with activated ROP11 in vivo, which could provide positive feedback for ROP activation. Required for periodic formation of secondary cell wall pits
TAIR Short Description: RHO guanyl-nucleotide exchange factor 4
TAIR Aliases: ATROPGEF4, GEF4, RHS11, ROPGEF4
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Gene
AT4G38430 | locus:2121828 | ROPGEF1 | ROP (rho of plants) guanine nucleotide exchange factor 1
Length: 2486  
Chromosome Location: Chr4: 17986384-17988869
Organism . Short Name: A. thaliana
TAIR Computational Description: rho guanyl-nucleotide exchange factor 1;(source:Araport11)
TAIR Curator Summary: Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity. ropgef1 mutants have defects in auxin transport that result in abnormal development of embryos and growth defects.
TAIR Short Description: rho guanyl-nucleotide exchange factor 1
TAIR Aliases: ATROPGEF1, ROPGEF1
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Gene
AT5G02010 | locus:2185153 | ROPGEF7 | ROP (rho of plants) guanine nucleotide exchange factor 7
Length: 2758  
Chromosome Location: Chr5: 383153-385910
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 7;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Involved in cell wall patterning. Encodes ROP activator, regulates the formation of ROP-activated domains; these in turn determine the pattern of cell wall pits. Required for periodic formation of secondary cell wall pits.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 7
TAIR Aliases: ATROPGEF7, ROPGEF7
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Gene
AT1G30230 | locus:2009807 | eEF-1Bb1 | eukaryotic elongation factor 1B beta 1
Length: 2064  
Chromosome Location: Chr1: 10638878-10640941
Organism . Short Name: A. thaliana
TAIR Computational Description: translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11)
TAIR Curator Summary: Encodes a guanine nucleotide exchange factor that plays an important role in translation elongation. It is localized in the plasma membrane and cytosol. Mutants display ectopic lignin deposition as well as cell expansion defects
TAIR Short Description: Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6
TAIR Aliases: eEF-1Bb1, EF1Bb
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Gene
AT1G53000 | locus:2037015 | CKS | CMP-KDO synthetase
Length: 2857  
Chromosome Location: Chr1: 19744948-19747804
Organism . Short Name: A. thaliana
TAIR Computational Description: Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a mitochondrial-localized CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. This is the enzyme activating KDO as a nucleotide sugar prior to its incorporation into rhamnogalacturonan-II. Heterozygous mutants are defective in pollen development and in pollen tube elongation.
TAIR Short Description: Nucleotide-diphospho-sugar transferases superfamily protein
TAIR Aliases: AtCKS, CKS, KDSB
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Gene
AT1G23190 | locus:2028110 | PGM3 | phosphoglucomutase 3
Length: 4740  
Chromosome Location: Chr1: 8219808-8224547
Organism . Short Name: A. thaliana
TAIR Computational Description: Phosphoglucomutase/phosphomannomutase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development. The mRNA is cell-to-cell mobile.
TAIR Short Description: Phosphoglucomutase/phosphomannomutase family protein
TAIR Aliases: PGM3
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Gene
AT2G01660 | locus:2065450 | PDLP6 | plasmodesmata-located protein 6
Length: 2116  
Chromosome Location: Chr2: 290573-292688
Organism . Short Name: A. thaliana
TAIR Computational Description: plasmodesmata-located protein 6;(source:Araport11)
TAIR Curator Summary: Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.
TAIR Short Description: plasmodesmata-located protein 6
TAIR Aliases: PDLP6
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