help  | faq  | software  | BAR

Search our database by keyword

- or -

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, pathways, authors, ontology terms, etc. (e.g. eve, embryo, zen, allele)
  • Use OR to search for either of two terms (e.g. fly OR drosophila) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. dros* for partial matches or fly AND NOT embryo to exclude a term

Search results 101 to 200 out of 233 for Single Nucleotide Polymorphism

Category restricted to Generif (x)

<< First    < Previous  |  Next >    Last >>
0.049s

Categories

Category: Generif
« show all
Type Details Score
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Unlike single gene mutants, the ukl1 ukl2 double mutant has severe developmental defects and reduced biomass accumulation, indicating these enzymes catalyze redundant reactions.
Organism: A. thaliana
Gene: UK/UPRT1
PubMed Id: 21828290
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Farnesyl diphosphate synthase (FPS) single fps1 and fps2 knockout mutants are phenotypically indistinguishable from wild-type plants, while fps1/fps2 double mutants are embryo lethal.
Organism: A. thaliana
Gene: FPS1
PubMed Id: 27382138
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data indicate that nitrate uptake through AtNRT1.1 conforms to a single low-affinity transport system that makes virtually no contribution to high-affinity nitrate uptake.
Organism: A. thaliana
Gene: NRT1.1
PubMed Id: 24089435
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The crystal structures of the nucleotide binding domain of HMA6 and HMA8 from Arabidopsis thaliana are reported at 1.5A and 1.75A resolution, respectively, providing the first structural information on plants Cu+-ATPases.
Organism: A. thaliana
Gene: PAA1
PubMed Id: 27802305
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The crystal structures of the nucleotide binding domain of HMA6 and HMA8 from Arabidopsis thaliana are reported at 1.5A and 1.75A resolution, respectively, providing the first structural information on plants Cu+-ATPases.
Organism: A. thaliana
Gene: PAA2
PubMed Id: 27802305
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data indicate that single and double mutants of phosphatidylinositol 3-phosphate 5-kinases (PI3P5Ks) FAB1A, FAB1B, FAB1C and FAB1D exhibited slow stomatal closure upon ABA treatment.
Organism: A. thaliana
Gene: FAB1B
PubMed Id: 23757398
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data indicate that the THI4 (AT5G54770) and the ThiM (AT3G24030)/THI4 mutants did not grow, as was expected, and the ThiM single mutant grew normally.
Organism: A. thaliana
Gene: AT3G24030
PubMed Id: 23816351
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data indicate that single and double mutants of phosphatidylinositol 3-phosphate 5-kinases (PI3P5Ks) FAB1A, FAB1B, FAB1C and FAB1D exhibited slow stomatal closure upon ABA treatment.
Organism: A. thaliana
Gene: FAB1A
PubMed Id: 23757398
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data indicate that the THI4 (AT5G54770) and the ThiM (AT3G24030)/THI4 mutants did not grow, as was expected, and the ThiM single mutant grew normally.
Organism: A. thaliana
Gene: THI1
PubMed Id: 23816351
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data indicate that single and double mutants of phosphatidylinositol 3-phosphate 5-kinases (PI3P5Ks) FAB1A, FAB1B, FAB1C and FAB1D exhibited slow stomatal closure upon ABA treatment.
Organism: A. thaliana
Gene: FAB1D
PubMed Id: 23757398
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Arabidopsis has two functional type-II pantothenate kinases with overlapping activity. AtPANK1 is a monofunctional enzyme that has a single type-II antothenate kinase domain. [PANK1]
Organism: A. thaliana
Gene: PANK1
PubMed Id: 16897480
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data indicate that single and double mutants of phosphatidylinositol 3-phosphate 5-kinases (PI3P5Ks) FAB1A, FAB1B, FAB1C and FAB1D exhibited slow stomatal closure upon ABA treatment.
Organism: A. thaliana
Gene: FAB1C
PubMed Id: 23757398
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: we have identified an Arabidopsis thaliana nucleotide sugar transporter that is able to complement CMP-sialic acid transport deficiency of Lec2 cells. At5g41760 is a member of the triose-phosphate/nucleotide sugar transporter gene family.
Organism: A. thaliana
Gene: AT5G41760
PubMed Id: 18258224
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: MRP1 is important for vacuolar accumulation of antifolates as well as tolerance against arsenic, both of which involved phosphorylation in the serine triads at the C terminal nucleotide binding domain of MRP1.
Organism: A. thaliana
Gene: ABCC1
PubMed Id: 27428365
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: AvrB is activated inside the host cell by nucleotide binding and subsequent phosphorylation and interacts with RIN4. Aactivated AvrB, bound to RIN4, is indirectly recognized by RPM1 to initiate plant immune system function.
Organism: A. thaliana
Gene: RPM1
PubMed Id: 17397263
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: In Arabidosis, there is high similarity of Bub3.1 and Bub3.2 sequences at the nucleotide level but Bub3.1 and not Bub3.2 showed increased expression during mitosis. Bub3.1 appeared to be essential during embryogenesis. [Bub3.1]
Organism: A. thaliana
Gene: BUB3.1
PubMed Id: 18508582
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: AvrB is activated inside the host cell by nucleotide binding and subsequent phosphorylation and interacts with RIN4. Aactivated AvrB, bound to RIN4, is indirectly recognized by RPM1 to initiate plant immune system function.
Organism: A. thaliana
Gene: RIN4
PubMed Id: 17397263
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The biochemical properties of A. thaliana P5CR suggest a complex regulation of enzyme activity by the redox status of the pyridine nucleotide pools, and the concentrations of proline and chloride in the cytosol.
Organism: A. thaliana
Gene: P5CR
PubMed Id: 24467670
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: When grown in a light-dark regime, mesophyll chloroplasts of dpe2-1xphs1a contain a single starch granule but under continuous illumination more granules per chloroplast are formed.
Organism: A. thaliana
Gene: DPE2
PubMed Id: 24302650
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: When grown in a light-dark regime, mesophyll chloroplasts of dpe2-1xphs1a contain a single starch granule but under continuous illumination more granules per chloroplast are formed.
Organism: A. thaliana
Gene: PHS1
PubMed Id: 24302650
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Site-directed mutagenesis in the putative catalytic triad of AvrRpm1 results in loss of both AvrRpm1-dependent virulence and AvrRpm1-mediated activation of RPM1 but causes the ability to activate the RPS2 nucleotide binding leucine-rich repeat sensor.
Organism: A. thaliana
Gene: RPS2
PubMed Id: 22880057
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: ). DNA recognized by AtSPL14 contained the core binding motif (GTAC) found for other SBP domain proteins, but mutational analyses indicated that at least one additional flanking nucleotide is necessary for effective AtSPL14-DNA interaction.
Organism: A. thaliana
Gene: SPL14
PubMed Id: 18302343
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: In contrast to other plastochromanol-8 biosynthetic mutants, neither the single atsps knock-outs nor the atsps1 atsps2 double knock-out displayed any defects in tocopherols accumulation or germination.
Organism: A. thaliana
Gene: SPS2
PubMed Id: 23913686
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: In contrast to other plastochromanol-8 biosynthetic mutants, neither the single atsps knock-outs nor the atsps1 atsps2 double knock-out displayed any defects in tocopherols accumulation or germination.
Organism: A. thaliana
Gene: SPS1
PubMed Id: 23913686
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: RDR2 converts Pol IV transcripts into double-stranded RNAs and then typically adds an extra untemplated 3' terminal nucleotide to the second strands. The dicer endonuclease DCL3 cuts resulting duplexes to generate 24- and 23-nt siRNAs.
Organism: A. thaliana
Gene: NRPD2A
PubMed Id: 31398324
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: RDR2 converts Pol IV transcripts into double-stranded RNAs and then typically adds an extra untemplated 3' terminal nucleotide to the second strands. The dicer endonuclease DCL3 cuts resulting duplexes to generate 24- and 23-nt siRNAs.
Organism: A. thaliana
Gene: DCL3
PubMed Id: 31398324
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: RDR2 converts Pol IV transcripts into double-stranded RNAs and then typically adds an extra untemplated 3' terminal nucleotide to the second strands. The dicer endonuclease DCL3 cuts resulting duplexes to generate 24- and 23-nt siRNAs.
Organism: A. thaliana
Gene: RDR2
PubMed Id: 31398324
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: A pair of Arabidopsis nucleotide binding and leucine rich repeat-type R genes, RPS4 and RRS1, properly function in two other Brassicaceae, Brassica rapa and Brassica napus, but also in two Solanaceae, Nicotiana benthamiana and tomato.
Organism: A. thaliana
Gene: RPS1
PubMed Id: 23437080
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: A pair of Arabidopsis nucleotide binding and leucine rich repeat-type R genes, RPS4 and RRS1, properly function in two other Brassicaceae, Brassica rapa and Brassica napus, but also in two Solanaceae, Nicotiana benthamiana and tomato.
Organism: A. thaliana
Gene: RPS4
PubMed Id: 23437080
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: A pair of Arabidopsis nucleotide binding and leucine rich repeat-type R genes, RPS4 and RRS1, properly function in two other Brassicaceae, Brassica rapa and Brassica napus, but also in two Solanaceae, Nicotiana benthamiana and tomato.
Organism: A. thaliana
Gene: RRS1
PubMed Id: 23437080
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data suggest that binding of nucleotide to nucleoside diphosphate kinase 2 (NDPK2) plays a regulatory role in phytochrome signaling and that the C-terminal extension of NDPK2 provides a potential binding surface for interaction with phytochromes.
Organism: A. thaliana
Gene: NDPK2
PubMed Id: 15465053
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: In Arabidopsis mitochondria and plastids, a single protein called 'proteinaceous RNase P' (PRORP1) can perform the endonucleolytic maturation of tRNA precursors that defines RNase P activity. [PRORP1]
Organism: A. thaliana
Gene: PRORP1
PubMed Id: 20473316
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data show that thymidine kinase was encoded by AtTK1a (AT3G07800) and (AT5G23070), and deoxyadenosine, deoxyguanosine and deoxycytidine kinase activities were encoded by a single AtdNK (AT1G72040) gene.
Organism: A. thaliana
Gene: TK1a
PubMed Id: 22897443
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: These findings demonstrate a specific role for AtBBX32 in modulating soybean development, and demonstrate the validity of expressing single genes in crops to deliver increased agricultural productivity.
Organism: A. thaliana
Gene: BBX32
PubMed Id: 22363475
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: med12 and med13 single mutants exhibit shoot and root phenotypes consistent with altered auxin homeostasis including altered primary root growth, lateral root development, and root hair elongation.
Organism: A. thaliana
Gene: CCT
PubMed Id: 28780645
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: While single cbl2 or cbl3 mutants did not display discernable phenotypes, cbl2/cbl3 mutants exhibited defects in vegetative growth and were severely impaired in seed development and morphology.
Organism: A. thaliana
Gene: CBL3
PubMed Id: 24479654
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: CFM4, one of two Arabidopsis genes encoding a single CRM domain-containing protein, harbors RNA chaperone activity and plays a role in the Arabidopsis growth and stress response.[CFM4]
Organism: A. thaliana
Gene: AT4G39040
PubMed Id: 24739417
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data show that thymidine kinase was encoded by AtTK1a (AT3G07800) and (AT5G23070), and deoxyadenosine, deoxyguanosine and deoxycytidine kinase activities were encoded by a single AtdNK (AT1G72040) gene.
Organism: A. thaliana
Gene: TK1b
PubMed Id: 22897443
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Constitutive AAA-ATPase expression, stunted growth, reduced Chl content, disturbed chloroplast division and spontaneous cell deaths in caa33 are caused by the mutation of a single gene, CRL.
Organism: A. thaliana
Gene: CRL
PubMed Id: 22014227
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: While single cbl2 or cbl3 mutants did not display discernable phenotypes, cbl2/cbl3 mutants exhibited defects in vegetative growth and were severely impaired in seed development and morphology.
Organism: A. thaliana
Gene: CBL2
PubMed Id: 24479654
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: med12 and med13 single mutants exhibit shoot and root phenotypes consistent with altered auxin homeostasis including altered primary root growth, lateral root development, and root hair elongation.[MED13]
Organism: A. thaliana
Gene: GCT
PubMed Id: 28780645
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data show that thymidine kinase was encoded by AtTK1a (AT3G07800) and (AT5G23070), and deoxyadenosine, deoxyguanosine and deoxycytidine kinase activities were encoded by a single AtdNK (AT1G72040) gene.
Organism: A. thaliana
Gene: dNK
PubMed Id: 22897443
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Under oxidative stress, AtNUDX7 serves to maintain NAD(+) levels by supplying ATP via nucleotide recycling from free ADP-Rib molecules and thus regulates the defense mechanisms against oxidative DNA damage via modulation of the PAR reaction. [AtNUDX7]
Organism: A. thaliana
Gene: NUDT7
PubMed Id: 19656905
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Reduced repla resembling Arabidopsis rpl mutant correlated across the Brassicaceae with a point mutation in a conserved cis-element of RPL. When introduced in Arabidopsis, this nucleotide change specifically reduced RPL expression + function in the fruit.
Organism: A. thaliana
Gene: RPL
PubMed Id: 21737279
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Phenotypic characterization and quantitative analysis of endogenous gibberellin (GA) contents of single and double kao mutants further confirm an overlapping role of KAO1 and KAO2 throughout Arabidopsis development.
Organism: A. thaliana
Gene: KAO2
PubMed Id: 25146977
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: NLP7 expression maintains pectin and cellulose levels in the root and represses the expression of CEL5, XTH5, PL, SMB, and BRN1/2, thereby preventing single cell border-like cell release.
Organism: A. thaliana
Gene: NLP7
PubMed Id: 27221617
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: the existence of partial redundancy between SERK3 and SERK1 as well as the promoting or repressive activity of a single coreceptor in multiple simultaneously active pathways, is reported.
Organism: A. thaliana
Gene: BAK1
PubMed Id: 27803191
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: established the roles of one of these genes, At5g46920 (AtnMat2), in the splicing of several mitochondrial introns, including the single intron within cox2, nad1 intron2, and nad7 intron2.
Organism: A. thaliana
Gene: AT5G46920
PubMed Id: 19946041
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Phenotypic characterization and quantitative analysis of endogenous gibberellin (GA) contents of single and double kao mutants further confirm an overlapping role of KAO1 and KAO2 throughout Arabidopsis development.
Organism: A. thaliana
Gene: CYP88A3
PubMed Id: 25146977
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data show that acyl-lipid thioesterase 1-4 ALT1 (At1g35290) and ALT2 (At1g35250) are separated by four genes, while ALT3 (At1g68260) and ALT4 (At1g68280) are separated by a single gene.
Organism: A. thaliana
Gene: AT1G35250
PubMed Id: 24214063
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data show that acyl-lipid thioesterase 1-4 ALT1 (At1g35290) and ALT2 (At1g35250) are separated by four genes, while ALT3 (At1g68260) and ALT4 (At1g68280) are separated by a single gene.
Organism: A. thaliana
Gene: AT1G35290
PubMed Id: 24214063
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data show that acyl-lipid thioesterase 1-4 ALT1 (At1g35290) and ALT2 (At1g35250) are separated by four genes, while ALT3 (At1g68260) and ALT4 (At1g68280) are separated by a single gene.
Organism: A. thaliana
Gene: AT1G68260
PubMed Id: 24214063
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data show that acyl-lipid thioesterase 1-4 ALT1 (At1g35290) and ALT2 (At1g35250) are separated by four genes, while ALT3 (At1g68260) and ALT4 (At1g68280) are separated by a single gene.
Organism: A. thaliana
Gene: AT1G68280
PubMed Id: 24214063
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: the existence of partial redundancy between SERK3 and SERK1 as well as the promoting or repressive activity of a single coreceptor in multiple simultaneously active pathways, is reported.
Organism: A. thaliana
Gene: SERK1
PubMed Id: 27803191
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: efficacy of biotin supplementation was significantly lower in double than in single mutants, showing that transport of biotin into the embryo is lower in the absence of SUC5
Organism: A. thaliana
Gene: SUC5
PubMed Id: 23031218
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: sporophytic, but not gametophytic, defects are the main cause of the observed reduction in seed yield in cngc2 plants, and suggest that correct cyclic nucleotide and calcium signaling are important for cell elongation and pollen tube guidance.
Organism: A. thaliana
Gene: DND1
PubMed Id: 19368669
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Examination of different single and multiple drb mutants revealed a clear association between the loss of DRB2 activity and altered accumulation for both the elevated and reduced miRNA classes.
Organism: A. thaliana
Gene: DRB2
PubMed Id: 22545148
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: TIP1;1 and TIP1;2 single or double mutants did not show significant changes in water content or water retention, and showed no sign of early senescence or growth retardation. [TIP1;1]
Organism: A. thaliana
Gene: GAMMA-TIP
PubMed Id: 18643996
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: SeLCY transgenic Arabidopsis improved salt tolerance by increasing synthesis of carotenoids, and as a single gene, SeLCY functionally showed no advantage for salt tolerance improvement compared with AtLCY. [AtLCy]
Organism: A. thaliana
Gene: LYC
PubMed Id: 21471119
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: TIP1;1 and TIP1;2 single or double mutants did not show significant changes in water content or water retention, and showed no sign of early senescence or growth retardation. [TIP1;2]
Organism: A. thaliana
Gene: TIP2
PubMed Id: 18643996
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: defective farnesylation of a single factor-heat-shock protein 40 (HSP40), encoded by the J2 and J3 genes-is sufficient to confer abscisic acid hypersensitivity, drought resistance, late flowering, and enlarged meristems.
Organism: A. thaliana
Gene: J3
PubMed Id: 29269486
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Double mutations in the plastid K(+) exchange antiporter (KEA) transporters kea1kea2 and a single mutation that does not visibly affect chloroplast structure, kea3, impaired the rapid hyperosmotic-induced Ca(2+) responses.
Organism: A. thaliana
Gene: KEA3
PubMed Id: 27528686
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Double mutations in the plastid K(+) exchange antiporter (KEA) transporters kea1kea2 and a single mutation that does not visibly affect chloroplast structure, kea3, impaired the rapid hyperosmotic-induced Ca(2+) responses.
Organism: A. thaliana
Gene: KEA2
PubMed Id: 27528686
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: double loss-of-function mutant (mkk1/2) of MKK1 and MKK2 is shown to have marked phenotypes in development and disease resistance similar to those of the single mekk1 and mpk4 mutants
Organism: A. thaliana
Gene: MEK1
PubMed Id: 18599650
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: ALDH3I1 and ALDH7B4 are strongly induced by heat stress. Higher levels of ALDH7B4 accumulated in response to dehydration-heat, heat-salt and wounding-heat combination stress than in response to single stressors.
Organism: A. thaliana
Gene: ALDH3I1
PubMed Id: 28922758
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: A novel interaction between mutant alleles of two genes, gl3-sst derived from GL3, and SIM exhibits mounds of cells derived from the proliferation of single trichome precursors. [SIAMESE] [SIM]
Organism: A. thaliana
Gene: SIM
PubMed Id: 17764505
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: EFR(N143Q) lacking a single conserved N-glycosylation site from the EFR ectodomain accumulated to reduced levels and lost the ability to bind its ligand and to mediate elf18-elicited oxidative burst.
Organism: A. thaliana
Gene: EFR
PubMed Id: 20007973
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: defective farnesylation of a single factor-heat-shock protein 40 (HSP40), encoded by the J2 and J3 genes-is sufficient to confer abscisic acid hypersensitivity, drought resistance, late flowering, and enlarged meristems.
Organism: A. thaliana
Gene: J2
PubMed Id: 29269486
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The tgg1, single and tgg1 tgg2 double mutants showed morphological changes compared to wild-type plants visible as changes in pavement cells, stomatal cells and the ultrastructure of the cuticle.
Organism: A. thaliana
Gene: TGG2
PubMed Id: 27976683
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The tgg1, single and tgg1 tgg2 double mutants showed morphological changes compared to wild-type plants visible as changes in pavement cells, stomatal cells and the ultrastructure of the cuticle.
Organism: A. thaliana
Gene: TGG1
PubMed Id: 27976683
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The results provide evidence that in plants, Pop1p is associated with MRP RNAs and with the catalytic subunit of RNase P, either separately or in a single large complex.
Organism: A. thaliana
Gene: ABCI21
PubMed Id: 22641852
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Double mutations in the plastid K(+) exchange antiporter (KEA) transporters kea1kea2 and a single mutation that does not visibly affect chloroplast structure, kea3, impaired the rapid hyperosmotic-induced Ca(2+) responses.
Organism: A. thaliana
Gene: KEA1
PubMed Id: 27528686
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: ALDH3I1 and ALDH7B4 are strongly induced by heat stress. Higher levels of ALDH7B4 accumulated in response to dehydration-heat, heat-salt and wounding-heat combination stress than in response to single stressors.
Organism: A. thaliana
Gene: ALDH7B4
PubMed Id: 28922758
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: It was found that a loss of miR164 activity leads to a severe disruption of shoot development, in contrast to the effect of mutation in any single MIR164 gene.
Organism: A. thaliana
Gene: MIR164A
PubMed Id: 17287247
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: It was found that a loss of miR164 activity leads to a severe disruption of shoot development, in contrast to the effect of mutation in any single MIR164 gene.
Organism: A. thaliana
Gene: MIR164B
PubMed Id: 17287247
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: It was found that a loss of miR164 activity leads to a severe disruption of shoot development, in contrast to the effect of mutation in any single MIR164 gene.
Organism: A. thaliana
Gene: MIR164C
PubMed Id: 17287247
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: In an intricate interplay between three partly redundant single R3 MYB proteins, CPC, ETC1, and TRY regulate several developmental, physiological and metabolic processes that are putatively located in different tissues.
Organism: A. thaliana
Gene: CPC
PubMed Id: 26022254
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The modified CHLM activity of single and double mutants with cysteine substitution is presented, and the role of each cysteine residue is discussed based on a modeled structure of CHLM.
Organism: A. thaliana
Gene: CHLM
PubMed Id: 26759408
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: In an intricate interplay between three partly redundant single R3 MYB proteins, CPC, ETC1, and TRY regulate several developmental, physiological and metabolic processes that are putatively located in different tissues.
Organism: A. thaliana
Gene: TRY
PubMed Id: 26022254
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Arabidopsis ATM3 may transport (1) at least two distinct compounds or (2) a single compound required for both Fe-S and molybdenum cofactor assembly machineries in the cytosol, but not iron.
Organism: A. thaliana
Gene: ABCB25
PubMed Id: 19710232
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Removal of the single protein subunit NDUFS4 prevents assembly of complex I of the respiratory chain and removes its function from mitochondria without pleiotropic effects on other respiratory components. [NDUFS4]
Organism: A. thaliana
Gene: FRO1
PubMed Id: 19675153
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: In an intricate interplay between three partly redundant single R3 MYB proteins, CPC, ETC1, and TRY regulate several developmental, physiological and metabolic processes that are putatively located in different tissues.
Organism: A. thaliana
Gene: ETC1
PubMed Id: 26022254
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: This novel pro-survival role of AtMC1 may be functionally related to its prodomain-mediated aggregate localization and potential clearance, in agreement with recent findings using the single budding yeast metacaspase YCA1.
Organism: A. thaliana
Gene: MC1
PubMed Id: 24786830
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: These findings reveal distinct relationships between GL2 and single MYBs in the regulation of trichome vs root hair development, and provide new insights into the molecular mechanism of epidermal patterning.
Organism: A. thaliana
Gene: GL2
PubMed Id: 19878461
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: HEN1 is a miRNA methyltransferase that adds a methyl group to the 3'-most nucleotide of miRNAs as well as siRNAs from sense transgenes, hairpin transgenes, and transposons or repeat sequences, and a new class of siRNAs known as trans-acting siRNAs.
Organism: A. thaliana
Gene: HEN1
PubMed Id: 16111943
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: single prr7-3 or prr9-1 mutants exhibit modest period lengthening, but the prr7-3 prr9-1 double mutant shows dramatic and more than additive period lengthening in the light and becomes arrhythmic in constant darkness
Organism: A. thaliana
Gene: PRR9
PubMed Id: 15705949
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The data support the hypothesis that the opposite root system phenotypes of hy5 single and hy5 hyh double mutants represent the morphological response to a quantitative gradient in the same molecular process.
Organism: A. thaliana
Gene: HYH
PubMed Id: 17121469
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: mos7-1 single mutant plants exhibit defects in basal and R protein-mediated immunity and in systemic acquired resistance but do not display obvious pleiotropic defects in development, salt tolerance, or plant hormone responses.
Organism: A. thaliana
Gene: MOS7
PubMed Id: 19700630
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The data support the hypothesis that the opposite root system phenotypes of hy5 single and hy5 hyh double mutants represent the morphological response to a quantitative gradient in the same molecular process.
Organism: A. thaliana
Gene: HY5
PubMed Id: 17121469
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: single prr7-3 or prr9-1 mutants exhibit modest period lengthening, but the prr7-3 prr9-1 double mutant shows dramatic and more than additive period lengthening in the light and becomes arrhythmic in constant darkness
Organism: A. thaliana
Gene: PRR7
PubMed Id: 15705949
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Results suggest that during the late petal development stages, SPIKE1 (SPK1), encoding a guanine nucleotide exchange factor and Rho of Plants (ROP) GTPase proteins (ROP2, ROP4, and ROP6)-dependent signaling module influences anisotropic growth in the petal and defines the final organ shape.
Organism: A. thaliana
Gene: SPK1
PubMed Id: 27440754
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Results suggest that during the late petal development stages, SPIKE1 (SPK1), encoding a guanine nucleotide exchange factor and Rho of Plants (ROP) GTPase proteins (ROP2, ROP4, and ROP6)-dependent signaling module influences anisotropic growth in the petal and defines the final organ shape.
Organism: A. thaliana
Gene: RAC3
PubMed Id: 27440754
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Results suggest that during the late petal development stages, SPIKE1 (SPK1), encoding a guanine nucleotide exchange factor and Rho of Plants (ROP) GTPase proteins (ROP2, ROP4, and ROP6)-dependent signaling module influences anisotropic growth in the petal and defines the final organ shape.
Organism: A. thaliana
Gene: ROP2
PubMed Id: 27440754
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Results suggest that during the late petal development stages, SPIKE1 (SPK1), encoding a guanine nucleotide exchange factor and Rho of Plants (ROP) GTPase proteins (ROP2, ROP4, and ROP6)-dependent signaling module influences anisotropic growth in the petal and defines the final organ shape.
Organism: A. thaliana
Gene: ARAC5
PubMed Id: 27440754
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: identified a number of DNA binding proteins each containing a single Myb domain that included the ALWAYS EARLY proteins AtALY2 and AtALY3, and two telomere binding proteins AtTBP1 and AtTRP2/TRFL1 as SNL1 partners
Organism: A. thaliana
Gene: TBP1
PubMed Id: 19962994
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Single and double knockout deletions of eIFis4G1 (i4g1) and eIFiso4G2 (i4g2) genes in A. thaliana reduce the amounts of chlorophyll a and b, suggesting a role in the expression of chloroplast proteins. [i4g2] [eIFiso4G2]
Organism: A. thaliana
Gene: eIFiso4G2
PubMed Id: 20694742
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: it is proposed that FCA and FPA regulate chromatin silencing of single and low-copy genes and interact in a locus-dependent manner with the canonical small interfering RNA-directed DNA methylation pathway to regulate common targets
Organism: A. thaliana
Gene: FPA
PubMed Id: 17916737
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: an Arabidopsis SPL12 SBP-domain fragment that lacks a Cys residue involved in the C-terminal zinc-binding pocket was found to retain a folded structure, even though only a single Zn2+ ion binds to the fragment
Organism: A. thaliana
Gene: SPL12
PubMed Id: 16554053
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: it is proposed that FCA and FPA regulate chromatin silencing of single and low-copy genes and interact in a locus-dependent manner with the canonical small interfering RNA-directed DNA methylation pathway to regulate common targets
Organism: A. thaliana
Gene: FCA
PubMed Id: 17916737
•
•
•
•
•
GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The phenotype of Arabidopsis mutant Low Chlorophyll Fluorescence 1 (LCF1) with a high operating efficiency of Photosystem II and low chlorophyll fluorescence were linked to a single T-DNA insertion in the locus At4g36280 (MORC2).
Organism: A. thaliana
Gene: CRH1
PubMed Id: 28607440
•
•
•
•
•





BAR logo CAGEF logo CAGEF logo Araport logo JCVI logo TACC logo

InterMine is funded by the and interoperation is funded by

© 2002 - 2021 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom