| Type |
Details |
Score |
| Gene |
| Length: |
5758
 |
| Chromosome Location: |
Chr5: 3695792-3701549 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
embryonic flower 1 (EMF1);(source:Araport11) |
| TAIR Curator Summary: |
Involved in regulating reproductive development . Part of PcG like complex mediating floral gene expression repression including AG. |
| TAIR Short Description: |
embryonic flower 1 (EMF1) |
| TAIR Aliases: |
EMF1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1583
|
| Chromosome Location: |
Chr2: 12262013-12263595 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Homeodomain-like superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia. |
| TAIR Short Description: |
Homeodomain-like superfamily protein |
| TAIR Aliases: |
PRS, PRS1, WOX3 |
|
•
•
•
•
•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
177
|
|
•
•
•
•
•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
177
|
|
•
•
•
•
•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
177
|
|
•
•
•
•
•
|
| Gene |
| Length: |
1373
|
| Chromosome Location: |
Chr5: 1024500-1025872 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) |
| TAIR Curator Summary: |
Controls inflorescence meristem identity. Involved in the floral initiation process. Ortholog of the Antirrhinum gene CENTRORADIALIS (CEN). Involved in protein trafficking to the protein storage vacuole. TFL1 plays an antagonistic role to FT/TSF in the determination of inflorescence meristem identity. |
| TAIR Short Description: |
PEBP (phosphatidylethanolamine-binding protein) family protein |
| TAIR Aliases: |
TFL-1, TFL1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2622
|
| Chromosome Location: |
Chr5: 5827142-5829763 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
like heterochromatin protein (LHP1);(source:Araport11) |
| TAIR Curator Summary: |
Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. |
| TAIR Short Description: |
like heterochromatin protein (LHP1) |
| TAIR Aliases: |
AtLHP1, LHP1, TFL2 |
|
•
•
•
•
•
|
| Gene |
| Length: |
6001
|
| Chromosome Location: |
Chr5: 20823644-20829644 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
VEFS-Box of polycomb protein;(source:Araport11) |
| TAIR Curator Summary: |
Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3. |
| TAIR Short Description: |
VEFS-Box of polycomb protein |
| TAIR Aliases: |
AtEMF2, CYR1, EMF2, VEF2 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2410
|
| Chromosome Location: |
Chr3: 8163941-8166350 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
ARM repeat superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues. LFR is functionally associated with AS2 to mediate leaf development.A subunit shared by SYD- and MINU1/2-associated SWI/SNF complexes (PMID:36471048). |
| TAIR Short Description: |
ARM repeat superfamily protein |
| TAIR Aliases: |
LFR |
|
•
•
•
•
•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
177
|
|
•
•
•
•
•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
1096
|
|
•
•
•
•
•
|
| Gene |
| Length: |
996
|
| Chromosome Location: |
Chr5: 24922802-24923797 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) |
| TAIR Curator Summary: |
BFT is a member of The FLOWERING LOCUS T (FT)/TERMINAL FLOWER 1 (TFL1) gene family that encodes regulators involved in control of flower development. |
| TAIR Short Description: |
PEBP (phosphatidylethanolamine-binding protein) family protein |
| TAIR Aliases: |
BFT |
|
•
•
•
•
•
|
| Gene |
| Length: |
3596
|
| Chromosome Location: |
Chr3: 9776958-9780553 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Pectin lyase-like superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes an apoplast-localized polygalacturonase involved in cell elongation and flower development. |
| TAIR Short Description: |
Pectin lyase-like superfamily protein |
| TAIR Aliases: |
PGX1 |
|
•
•
•
•
•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
186
|
|
•
•
•
•
•
|
| Gene |
| Length: |
4181
|
| Chromosome Location: |
Chr4: 12023824-12028004 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
AGAMOUS-like 19;(source:Araport11) |
| TAIR Curator Summary: |
MADS-box protein AGL19; FYF-like gene that belongs to the SOC1 group; is complementary to FYF in regulating flower senescence; strong repressor, part of function complements FYF in suppressing flower organ senescence/abscission. |
| TAIR Short Description: |
AGAMOUS-like 19 |
| TAIR Aliases: |
AGL19, GL19 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2397
|
| Chromosome Location: |
Chr2: 18804190-18806586 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
AGAMOUS-like 6;(source:Araport11) |
| TAIR Curator Summary: |
Sequence suggests this encodes a MADS-box transcription factor. Negatively regulates the FLC/MAF clade genes and positively regulates FT in Arabidopsis. Forms complexes with FOREVER YOUNG FLOWER (FYF)-like proteins to regulate flower development. |
| TAIR Short Description: |
AGAMOUS-like 6 |
| TAIR Aliases: |
AGL6, RSB1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2453
|
| Chromosome Location: |
Chr1: 1993903-1996355 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
glycerol-3-phosphate acyltransferase 1;(source:Araport11) |
| TAIR Curator Summary: |
sn-glycerol-3-phosphate 2-O-acyltransferase. Expressed in flower buds and siliques. Homozygous mutant plants are male sterile. |
| TAIR Short Description: |
glycerol-3-phosphate acyltransferase 1 |
| TAIR Aliases: |
ATGPAT1, GPAT1, sn-2-GPAT1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1785
|
| Chromosome Location: |
Chr1: 12763902-12765686 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a zinc finger protein; involved in photomorphogenesis, flavonoid biosynthesis, flower and seed development. |
| TAIR Short Description: |
C2H2 and C2HC zinc fingers superfamily protein |
| TAIR Aliases: |
TT1, WIP1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1873
|
| Chromosome Location: |
Chr4: 17670481-17672353 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
BTB and TAZ domain protein 5;(source:Araport11) |
| TAIR Curator Summary: |
BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. |
| TAIR Short Description: |
BTB and TAZ domain protein 5 |
| TAIR Aliases: |
BT5 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1624
|
| Chromosome Location: |
Chr5: 2077382-2079005 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
peroxidase 2;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a peroxidase with diverse roles in the wound response, flower development, and syncytium formation. |
| TAIR Short Description: |
peroxidase 2 |
| TAIR Aliases: |
ATPA2, AtPRX53, PA2, PRX53 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2814
|
| Chromosome Location: |
Chr5: 26930539-26933352 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
BTB and TAZ domain protein 4;(source:Araport11) |
| TAIR Curator Summary: |
BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. |
| TAIR Short Description: |
BTB and TAZ domain protein 4 |
| TAIR Aliases: |
ATBT4, BT4 |
|
•
•
•
•
•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
631
|
|
•
•
•
•
•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
626
|
|
•
•
•
•
•
|
| Gene |
| Length: |
3435
|
| Chromosome Location: |
Chr4: 10098673-10102107 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
translocase 11;(source:Araport11) |
| TAIR Curator Summary: |
Encodes protein similar to similar to bacterial translocase I (mra Y). Expressed during flower bud development. |
| TAIR Short Description: |
translocase 11 |
| TAIR Aliases: |
ATTRANS11, TRANS11 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2584
|
| Chromosome Location: |
Chr5: 21081844-21084427 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
K-box region and MADS-box transcription factor family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a MADS-box transcription factor involved in floral transition, belongs to FOREVER YOUNG FLOWER (FYF) group. |
| TAIR Short Description: |
K-box region and MADS-box transcription factor family protein |
| TAIR Aliases: |
AGL72, FYL2 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2953
|
| Chromosome Location: |
Chr5: 21085462-21088414 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
AGAMOUS-like 71;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a MADS-box transcription factor involved in floral transition, belongs to FOREVER YOUNG FLOWER (FYF) group. |
| TAIR Short Description: |
AGAMOUS-like 71 |
| TAIR Aliases: |
AGL71, FYL1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2920
|
| Chromosome Location: |
Chr5: 5151334-5154253 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
K-box region and MADS-box transcription factor family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. |
| TAIR Short Description: |
K-box region and MADS-box transcription factor family protein |
| TAIR Aliases: |
AGL2, SEP1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1828
|
| Chromosome Location: |
Chr4: 1415617-1417444 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
xyloglucan endotransglucosylase/hydrolase 9;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers. |
| TAIR Short Description: |
xyloglucan endotransglucosylase/hydrolase 9 |
| TAIR Aliases: |
XTH9 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3929
|
| Chromosome Location: |
Chr1: 8149868-8153796 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
ferric reduction oxidase 3;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon. |
| TAIR Short Description: |
ferric reduction oxidase 3 |
| TAIR Aliases: |
ATFRO3, FRO3 |
|
•
•
•
•
•
|
| Gene |
| Length: |
4782
|
| Chromosome Location: |
Chr5: 13936086-13940867 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Transducin/WD40 repeat-like superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
A recessive mutation in the Arabidopsis STERILE APETALA (SAP) causes severe aberrations in inflorescence and flower and ovule development. |
| TAIR Short Description: |
Transducin/WD40 repeat-like superfamily protein |
| TAIR Aliases: |
SAP |
|
•
•
•
•
•
|
| Gene |
| Length: |
3651
|
| Chromosome Location: |
Chr1: 9099994-9103644 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
K-box region and MADS-box transcription factor family protein;(source:Araport11) |
| TAIR Curator Summary: |
Floral homeotic gene encoding a MADS domain protein homologous to AP1. Enhances the flower to shoot transformation in ap1 mutants. |
| TAIR Short Description: |
K-box region and MADS-box transcription factor family protein |
| TAIR Aliases: |
AGL10, CAL, CAL1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2658
|
| Chromosome Location: |
Chr1: 5317973-5320630 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
PPR motif containing protein. Found in mitochondria. Mutants flower early and have reduced levels of the ABI5, a regulator of FLC expression. |
| TAIR Short Description: |
Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR Aliases: |
POCO1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1662
|
| Chromosome Location: |
Chr3: 18910947-18912608 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
GATA type zinc finger transcription factor family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a GATA transcriptional regulator required to position the proembryo boundary in the early embryo. Regulates shoot apical meristem and flower development. |
| TAIR Short Description: |
GATA type zinc finger transcription factor family protein |
| TAIR Aliases: |
AtGATA18, GATA18, HAN, MNP |
|
•
•
•
•
•
|
| Gene |
| Length: |
3476
|
| Chromosome Location: |
Chr5: 20205302-20208777 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
ferric reduction oxidase 7;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a chloroplast ferric chelate reductase. Shows differential splicing and has three different mRNA products. Expressed in the shoot, flower and cotyledon. |
| TAIR Short Description: |
ferric reduction oxidase 7 |
| TAIR Aliases: |
ATFRO7, FRO7 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2145
|
| Chromosome Location: |
Chr5: 2382381-2384525 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
glycine rich protein 17;(source:Araport11) |
| TAIR Curator Summary: |
encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat. |
| TAIR Short Description: |
glycine rich protein 17 |
| TAIR Aliases: |
ATGRP-7, ATGRP17, GRP17 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3559
|
| Chromosome Location: |
Chr5: 20201037-20204595 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
ferric reduction oxidase 6;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner. |
| TAIR Short Description: |
ferric reduction oxidase 6 |
| TAIR Aliases: |
ATFRO6, FRO6 |
|
•
•
•
•
•
|
| Gene |
| Length: |
6922
|
| Chromosome Location: |
Chr1: 10413853-10420774 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
receptor-like kinase in flowers 1;(source:Araport11) |
| TAIR Curator Summary: |
Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains. |
| TAIR Short Description: |
receptor-like kinase in flowers 1 |
| TAIR Aliases: |
RKF1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2084
|
| Chromosome Location: |
Chr2: 18478374-18480457 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
alpha/beta-Hydrolases superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis. |
| TAIR Short Description: |
alpha/beta-Hydrolases superfamily protein |
| TAIR Aliases: |
DAD1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1723
|
| Chromosome Location: |
Chr1: 230908-232630 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
BTB/POZ domain-containing protein;(source:Araport11) |
| TAIR Curator Summary: |
Putative role in flower development. Comparison of SALK_011721C to Columbia wild type resulted in a trend toward earlier flowering in the mutant (P=0.1) (Stapleton and Woodruff 2009, personal communication). |
| TAIR Short Description: |
BTB/POZ domain-containing protein |
|
|
•
•
•
•
•
|
| Gene |
| Length: |
7132
|
| Chromosome Location: |
Chr3: 1401171-1408302 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
ARM repeat superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species. |
| TAIR Short Description: |
ARM repeat superfamily protein |
| TAIR Aliases: |
HST, HST1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1180
|
| Chromosome Location: |
Chr2: 2426176-2427355 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
growth-regulating factor 6;(source:Araport11) |
| TAIR Curator Summary: |
Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower |
| TAIR Short Description: |
growth-regulating factor 6 |
| TAIR Aliases: |
AtGRF6, GRF6 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3632
|
| Chromosome Location: |
Chr4: 7733114-7736745 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
terpenoid synthase 12;(source:Araport11) |
| TAIR Curator Summary: |
Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding. |
| TAIR Short Description: |
terpenoid synthase 12 |
| TAIR Aliases: |
ATTPS12, TPS12 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3524
|
| Chromosome Location: |
Chr4: 7742871-7746394 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
terpenoid synthase 13;(source:Araport11) |
| TAIR Curator Summary: |
Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding. |
| TAIR Short Description: |
terpenoid synthase 13 |
| TAIR Aliases: |
ATTPS13, TPS13 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2431
|
| Chromosome Location: |
Chr4: 9915813-9918243 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Peptidase M20/M25/M40 family protein;(source:Araport11) |
| TAIR Curator Summary: |
NAOD encodes a functional acetylornithine deacetylase. Silenced lines plants flower early but have reduced fertility (siliques do not develop) as well as reduced ornithine levels.NAOD mediates a linear pathway for ornithine biosynthesis. |
| TAIR Short Description: |
Peptidase M20/M25/M40 family protein |
| TAIR Aliases: |
AtNAOD, CGP1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2985
|
| Chromosome Location: |
Chr1: 10258248-10261232 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
ER lumen protein retaining receptor family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a protein similar in sequence to animal and yeast endoplasmic reticulum retention signal receptor. This protein can functionally complement the yeast homologue. Transcript is detected in flower buds, stems, root, and leaves. |
| TAIR Short Description: |
ER lumen protein retaining receptor family protein |
| TAIR Aliases: |
AERD2, ATERD2, ERD2 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3003
|
| Chromosome Location: |
Chr2: 14311712-14314714 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a zinc finger domain containing protein that is expressed in the shoot/root apex and vasculature, and acts with FRI to repress flowering.FES1 mutants in a Col(FRI+) background will flower early under inductive conditions. |
| TAIR Short Description: |
Zinc finger C-x8-C-x5-C-x3-H type family protein |
| TAIR Aliases: |
AtC3H27, FES1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3556
|
| Chromosome Location: |
Chr1: 7244939-7248494 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
tonoplast monosaccharide transporter1;(source:Araport11) |
| TAIR Curator Summary: |
The protein encoded by this gene is found in the tonoplast (vacuole membrane) of Arabidopsis cells. The gene is expressed at highest levels in juvenile (sink) and adult (source) leaves, followed by flower tissues. |
| TAIR Short Description: |
tonoplast monosaccharide transporter1 |
| TAIR Aliases: |
AtTMT1, TMT1, TST1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1623
|
| Chromosome Location: |
Chr3: 23096104-23097726 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
F-box/RNI-like superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes an F-box protein which is predominantly expressed in flower tissues and interacts with ASK19 protein. Mutations in this gene suggest it acts as a negative regulator of endothecial secondary wall thickening in anthers. |
| TAIR Short Description: |
F-box/RNI-like superfamily protein |
| TAIR Aliases: |
SAF1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2610
|
| Chromosome Location: |
Chr2: 1129229-1131838 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
K-box region and MADS-box transcription factor family protein;(source:Araport11) |
| TAIR Curator Summary: |
This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity. |
| TAIR Short Description: |
K-box region and MADS-box transcription factor family protein |
| TAIR Aliases: |
AGL3, SEP4 |
|
•
•
•
•
•
|
| Gene |
| Length: |
5167
|
| Chromosome Location: |
Chr1: 10685822-10690988 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
auxin response factor 6;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167. |
| TAIR Short Description: |
auxin response factor 6 |
| TAIR Aliases: |
ARF6 |
|
•
•
•
•
•
|
| Gene |
| Length: |
5002
|
| Chromosome Location: |
Chr5: 14629453-14634454 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
auxin response factor 8;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167. |
| TAIR Short Description: |
auxin response factor 8 |
| TAIR Aliases: |
ARF8, ATARF8 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2413
|
| Chromosome Location: |
Chr2: 14996713-14999125 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a phosphatidylglycerophosphate (PGP) phosphatase involved in the synthesis of plastidial Phosphatidylglycerol (PG) in conjunction with PGPP1 and PTPMT2 in root. PTPMT1 levels were higher in node, cauline leaf, and flower than in root, leaf, and stem. |
| TAIR Short Description: |
Phosphotyrosine protein phosphatases superfamily protein |
| TAIR Aliases: |
PTPMT1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
5339
|
| Chromosome Location: |
Chr5: 7097868-7103206 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Protein kinase superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development and is involved in the regulation of RNA interference. Expression localized to the developing style by stage 13. |
| TAIR Short Description: |
Protein kinase superfamily protein |
| TAIR Aliases: |
TSL |
|
•
•
•
•
•
|
| Gene |
| Length: |
2153
|
| Chromosome Location: |
Chr2: 16134543-16136695 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
transcript elongation factor IIS;(source:Araport11) |
| TAIR Curator Summary: |
Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy; essential for heat stress adaptation. |
| TAIR Short Description: |
transcript elongation factor IIS |
| TAIR Aliases: |
RDO2, TFIIS |
|
•
•
•
•
•
|
| Gene |
| Length: |
2573
|
| Chromosome Location: |
Chr4: 17725337-17727909 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
growth-regulating factor 2;(source:Araport11) |
| TAIR Curator Summary: |
Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower |
| TAIR Short Description: |
growth-regulating factor 2 |
| TAIR Aliases: |
AtGRF2, GRF2 |
|
•
•
•
•
•
|
| Gene |
| Length: |
5313
|
| Chromosome Location: |
Chr5: 2727613-2732925 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
zinc finger CCCH domain protein;(source:Araport11) |
| TAIR Curator Summary: |
Component of histone-deacetylase complexes. Interacts with HDA6 and HDA19 and facilitates histone deacetylation. Several salt-inducible genes are de-repressed in hdc1 mutants. Mutants are hypersensitive to ABA during germination, grow less and flower later than wildtype. HDC1-overexpressing plants display opposite phenotypes. |
| TAIR Short Description: |
NULL |
| TAIR Aliases: |
HDC1, RXT3-like |
|
•
•
•
•
•
|
| Gene |
| Length: |
2822
|
| Chromosome Location: |
Chr2: 9728480-9731301 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
growth-regulating factor 1;(source:Araport11) |
| TAIR Curator Summary: |
Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower |
| TAIR Short Description: |
growth-regulating factor 1 |
| TAIR Aliases: |
AtGRF1, GRF1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3001
|
| Chromosome Location: |
Chr1: 17282749-17285749 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Granulin repeat cysteine protease family protein;(source:Araport11) |
| TAIR Curator Summary: |
Cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.Activity detected in root, leaf, flower and cell culture. |
| TAIR Short Description: |
Granulin repeat cysteine protease family protein |
| TAIR Aliases: |
RD21, RD21A |
|
•
•
•
•
•
|
| mRNA |
| Length: |
1146
|
| Chromosome Location: |
Chr2: 12262013-12263595 |
|
•
•
•
•
•
|
| Gene |
| Length: |
7485
|
| Chromosome Location: |
Chr4: 15145628-15153112 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
DDB1-CUL4 associated factor 1;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development. |
| TAIR Short Description: |
DDB1-CUL4 associated factor 1 |
| TAIR Aliases: |
DCAF1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1045
|
| Chromosome Location: |
Chr1: 26927012-26928056 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Integrase-type DNA-binding superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. FUF1 appears to negatively regulate certain ethylene responsive EDF genes thereby negatively regulating flower senescence. |
| TAIR Short Description: |
Integrase-type DNA-binding superfamily protein |
| TAIR Aliases: |
FUF1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1870
|
| Chromosome Location: |
Chr1: 28013180-28015049 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
cytochrome P450, family 98, subfamily A, polypeptide 8;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a tricoumaroylspermidine / triferuloylspermidine meta-hydroxylase that participates in the formation of N1,N5-di(hydroxyferuloyol)- N10-sinapoyl spermidine, an important constituent of pollen. This gene appears to be expressed in young flower buds and inflorescence tips with notably high levels of expression in the tapetum and pollen. |
| TAIR Short Description: |
cytochrome P450, family 98, subfamily A, polypeptide 8 |
| TAIR Aliases: |
CYP98A8 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3043
|
| Chromosome Location: |
Chr3: 23369781-23372823 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
homocysteine methyltransferase 2;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. |
| TAIR Short Description: |
homocysteine methyltransferase 2 |
| TAIR Aliases: |
ATHMT-2, HMT-2, HMT2 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2240
|
| Chromosome Location: |
Chr4: 11000771-11003010 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a floral inducer that is a homolog of FT. Plants overexpressing this gene flower earlier than Col. Loss-of-function mutations flower later in short days. TSF and FT play overlapping roles in the promotion of flowering, with FT playing the dominant role and together playing an antagonistic role to TFL1 in the determination of inflorescence meristem identity. .TSF sequences show extensive variation in different accessions and may contribute to quantitative variation in flowering time in these accessions. TSF has a complex pattern of spatial expression; it is expressed mainly in phloem and expression is regulated by daylength and vernalization. |
| TAIR Short Description: |
PEBP (phosphatidylethanolamine-binding protein) family protein |
| TAIR Aliases: |
TSF |
|
•
•
•
•
•
|
| Gene |
| Length: |
2478
|
| Chromosome Location: |
Chr5: 7070491-7072968 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
RAS associated with diabetes protein 51;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a homolog of yeast RAD51. Its mRNA is most abundant in early flower buds and is expressed at high levels in exponentially growing cells in suspension cultures and is induced in response to gamma radiation. Also involved in defense gene transcription during plant immune responses. |
| TAIR Short Description: |
RAS associated with diabetes protein 51 |
| TAIR Aliases: |
ATRAD51, RAD51 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1787
|
| Chromosome Location: |
Chr2: 8808414-8810200 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
ROP-interactive CRIB motif-containing protein 6;(source:Araport11) |
| TAIR Curator Summary: |
encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC7 and RIC8 (subfamily group II). Gene is expressed predominantly in inflorescence and flower tissue. |
| TAIR Short Description: |
ROP-interactive CRIB motif-containing protein 6 |
| TAIR Aliases: |
RIC6 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1667
|
| Chromosome Location: |
Chr1: 28016045-28017711 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
cytochrome P450, family 98, subfamily A, polypeptide 9;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a tricoumaroylspermidine meta-hydroxylase that participates in the formation of N1,N5-di(hydroxyferuloyol)- N10-sinapoylspermidine, an important constituent of pollen. This gene appears to be expressed in young flower buds and inflorescence tips with notably high levels of expression in the tapetum and pollen. It is also expressed in root tips. |
| TAIR Short Description: |
cytochrome P450, family 98, subfamily A, polypeptide 9 |
| TAIR Aliases: |
CYP98A9 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3431
|
| Chromosome Location: |
Chr1: 29990336-29993766 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Integrase-type DNA-binding superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
WRI4 encodes an AP2/ERF-type transcriptional activator that specifically controls cuticular wax biosynthesis in Arabidopsis stems. It also functions to activate transcription of genes involved fatty acid biosynthesis during seed and flower development as well as stem wax biosynthesis. Targets identified by ChIP-seq include: LACS1, KCR1, PAS2, ECR, and WSD1. |
| TAIR Short Description: |
Integrase-type DNA-binding superfamily protein |
| TAIR Aliases: |
WRI4 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1724
|
| Chromosome Location: |
Chr3: 8373375-8375098 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
ROP-interactive CRIB motif-containing protein 5;(source:Araport11) |
| TAIR Curator Summary: |
encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Gene is expressed predominantly in inflorescence and flower tissue. |
| TAIR Short Description: |
ROP-interactive CRIB motif-containing protein 5 |
| TAIR Aliases: |
RIC5 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3541
|
| Chromosome Location: |
Chr4: 10949573-10953113 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Leucine-rich receptor-like protein kinase family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. The mRNA is cell-to-cell mobile. |
| TAIR Short Description: |
Leucine-rich receptor-like protein kinase family protein |
| TAIR Aliases: |
BAM3 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1379
|
| Chromosome Location: |
Chr5: 7852585-7853963 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
S-isoprenylcysteine O-methyltransferase;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a prenylcysteine alpha-carboxyl methyltransferase involved in methylation of isoprenylated proteins. This protein appears to have lower catalytic activity and a lower transcript expression level than the other ICMT present in Arabidopsis (At5g08335). Analysis of ICMT RNAi lines suggests that this protein may be involved in flower and stem development. |
| TAIR Short Description: |
homolog of yeast STE14 A |
| TAIR Aliases: |
ATICMTA, ATPCM, ATSTE14, ATSTE14A, ICMTA, STE14, STE14A |
|
•
•
•
•
•
|
| Gene |
| Length: |
2638
|
| Chromosome Location: |
Chr1: 2070737-2073374 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
MuDR family transposase;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). |
| TAIR Short Description: |
NULL |
| TAIR Aliases: |
MUG3 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3373
|
| Chromosome Location: |
Chr3: 1743413-1746785 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
MuDR family transposase;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). |
| TAIR Short Description: |
NULL |
| TAIR Aliases: |
MUG7 |
|
•
•
•
•
•
|
| Gene |
| Length: |
5205
|
| Chromosome Location: |
Chr1: 24149208-24154412 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
WEB family protein (DUF827);(source:Araport11) |
| TAIR Curator Summary: |
Encodes a microtubule-associated protein. Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). |
| TAIR Short Description: |
Plant protein of unknown function (DUF827) |
|
|
•
•
•
•
•
|
| Gene |
| Length: |
1742
|
| Chromosome Location: |
Chr4: 14597559-14599300 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Transducin/WD40 repeat-like superfamily protein;(source:Araport11) |
| TAIR Curator Summary: |
VIP3 protein is composed of repeats of WD motif which is involved in protein complex formation. The gene is involved in flower timing and flower development. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Loss of gene function leads to a redistribution of H3K4me3 and K3K36me2 modifications within genes but not a change in the overall abundance of these modifications within chromatin. Also known as SKI8, a component of the SKI complex involved in exosome mediated RNA degredation. Member of PAF-C complex. |
| TAIR Short Description: |
Transducin/WD40 repeat-like superfamily protein |
| TAIR Aliases: |
SKI8, VIP3 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2588
|
| Chromosome Location: |
Chr1: 1373234-1375821 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
protein arginine methyltransferase 10;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. |
| TAIR Short Description: |
protein arginine methyltransferase 10 |
| TAIR Aliases: |
ATPRMT10, PRMT10 |
|
•
•
•
•
•
|
| Gene |
| Length: |
2125
|
| Chromosome Location: |
Chr1: 5187549-5189673 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
lipid phosphate phosphatase 2;(source:Araport11) |
| TAIR Curator Summary: |
Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals. |
| TAIR Short Description: |
lipid phosphate phosphatase 2 |
| TAIR Aliases: |
ATLPP2, ATPAP2, LPP2 |
|
•
•
•
•
•
|
| Gene |
| Length: |
9846
|
| Chromosome Location: |
Chr1: 18139174-18149019 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
stomatal cytokinesis defective / SCD1 protein (SCD1);(source:Araport11) |
| TAIR Curator Summary: |
Encodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile. |
| TAIR Short Description: |
stomatal cytokinesis defective / SCD1 protein (SCD1) |
| TAIR Aliases: |
SCD1 |
|
•
•
•
•
•
|
| Gene |
| Length: |
3801
|
| Chromosome Location: |
Chr4: 12727531-12731331 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
tryptophan aminotransferase related 2;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.TAR2 is required for reprogramming root architecture in response to low nitrogen conditions. |
| TAIR Short Description: |
tryptophan aminotransferase related 2 |
| TAIR Aliases: |
AtTAR2, TAR2 |
|
•
•
•
•
•
|
| Gene |
| Length: |
6171
|
| Chromosome Location: |
Chr4: 16160824-16166994 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
dynamin-related protein 3A;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. |
| TAIR Short Description: |
dynamin-related protein 3A |
| TAIR Aliases: |
ADL2, APEM1, DRP3A, NOXY15 |
|
•
•
•
•
•
|
| Gene |
| Length: |
1785
|
| Chromosome Location: |
Chr5: 2681996-2683780 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Isoprenylcysteine carboxyl methyltransferase (ICMT) family;(source:Araport11) |
| TAIR Curator Summary: |
Encodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development. |
| TAIR Short Description: |
Isoprenylcysteine carboxyl methyltransferase (ICMT) family |
| TAIR Aliases: |
ATICMTB, ATSTE14B, ICMTB |
|
•
•
•
•
•
|
| Gene |
| Length: |
2600
|
| Chromosome Location: |
Chr5: 10647467-10650066 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
SSXT family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.Identified as a subunit shared by BRM- and SYD-associated SWI/SNF complexes (PMID:36471048). |
| TAIR Short Description: |
SSXT family protein |
| TAIR Aliases: |
AN3, ATGIF1, GIF, GIF1 |
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| Gene |
| Length: |
3482
|
| Chromosome Location: |
Chr1: 23058582-23062063 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
KNOX/ELK homeobox transcription factor;(source:Araport11) |
| TAIR Curator Summary: |
Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia. It has also been shown to have a role in the specification of flower meristem identity. |
| TAIR Short Description: |
KNOX/ELK homeobox transcription factor |
| TAIR Aliases: |
BUM, BUM1, SHL, STM, WAM, WAM1 |
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| Gene |
| Length: |
1838
|
| Chromosome Location: |
Chr3: 21944170-21946007 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
farnesyltransferase A;(source:Araport11) |
| TAIR Curator Summary: |
Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1. |
| TAIR Short Description: |
farnesyltransferase A |
| TAIR Aliases: |
ATFTA, FTA, PFT/PGGT-IALPHA, PLP |
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| Gene |
| Length: |
3280
|
| Chromosome Location: |
Chr3: 23054004-23057283 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 7);(source:Araport11) |
| TAIR Curator Summary: |
Encodes a protein with Agenet/Tudor and DUF724 domains. It can interact with ABAP1, a negative regulator of DNA replication and transcription, with the plant histone modification 'reader' LHP1, and with non-modified histones. It may act as a link between DNA replication, transcription and chromatin remodeling during flower development. Loss of function mutant has a WT phenotype. |
| TAIR Short Description: |
DOMAIN OF UNKNOWN FUNCTION 724 7 |
| TAIR Aliases: |
AIP1, ATDUF7, DUF7 |
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| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
244
|
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| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
157
|
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•
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| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
153
|
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•
|
| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
107
|
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•
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| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
143
|
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•
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| Protein |
| Organism . Name: |
Arabidopsis thaliana |
| Length: |
157
|
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•
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| Gene |
| Length: |
7160
|
| Chromosome Location: |
Chr2: 13455272-13462431 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
homologue of trithorax;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in bolting/flowering time together with ATX3 and ATX4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P. |
| TAIR Short Description: |
homologue of trithorax |
| TAIR Aliases: |
ATX1, SDG27 |
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| Gene |
| Length: |
3283
|
| Chromosome Location: |
Chr3: 1269722-1273004 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
CLP-similar protein 3;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression. |
| TAIR Short Description: |
CLP-similar protein 3 |
| TAIR Aliases: |
CLPS3 |
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| Gene |
| Length: |
2082
|
| Chromosome Location: |
Chr1: 24748105-24750186 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
RGA-like 1;(source:Araport11) |
| TAIR Curator Summary: |
Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development. |
| TAIR Short Description: |
RGA-like 1 |
| TAIR Aliases: |
RGL, RGL1 |
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| Gene |
| Length: |
2348
|
| Chromosome Location: |
Chr4: 89908-92255 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Lateral organ boundaries (LOB) domain family protein;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves. A maternally expressed imprinted gene. |
| TAIR Short Description: |
Lateral organ boundaries (LOB) domain family protein |
| TAIR Aliases: |
ASL19, JLO, LBD30 |
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| Gene |
| Length: |
2611
|
| Chromosome Location: |
Chr5: 23670267-23672877 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Phosphatidate cytidylyltransferase family protein;(source:Araport11) |
| TAIR Curator Summary: |
FOLK is a farnesol kinase that can phosphorylate farnesol using an NTP donor. It can also phosphorylate geraniol, or geranylgeraniol, but it prefers farnesol in experiments performed using yeast membranes. folk loss-of-function mutants show ABA hypersensitivity in a seed germination assay and the mutants also exhibit abnormal flower development, including extra carpel formation, when subjected to water stress. The mRNA is cell-to-cell mobile. |
| TAIR Short Description: |
Phosphatidate cytidylyltransferase family protein |
| TAIR Aliases: |
FOLK |
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| Gene |
| Length: |
4306
|
| Chromosome Location: |
Chr3: 2185129-2189434 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
protein arginine methyltransferase 4B;(source:Araport11) |
| TAIR Curator Summary: |
Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. |
| TAIR Short Description: |
protein arginine methyltransferase 4B |
| TAIR Aliases: |
ATPRMT4B, PRMT4B |
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| Gene |
| Length: |
3784
|
| Chromosome Location: |
Chr5: 19871191-19874974 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
protein arginine methyltransferase 4A;(source:Araport11) |
| TAIR Curator Summary: |
Encodes a type I protein arginine methyltransferase. PRMT4a can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. |
| TAIR Short Description: |
protein arginine methyltransferase 4A |
| TAIR Aliases: |
ATPRMT4A, PRMT4A |
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| Gene |
| Length: |
2647
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| Chromosome Location: |
Chr4: 14382819-14385465 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
Mnd1 family protein;(source:Araport11) |
| TAIR Curator Summary: |
A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis. |
| TAIR Short Description: |
Mnd1 family protein |
| TAIR Aliases: |
ATMND1 |
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| Gene |
| Length: |
5751
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| Chromosome Location: |
Chr1: 8969065-8974815 |
| Organism . Short Name: |
A. thaliana |
| TAIR Computational Description: |
phytochrome and flowering time regulatory protein (PFT1);(source:Araport11) |
| TAIR Curator Summary: |
Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. PFT1 promotes flowering in CO dependent and independent pathways and integrates several environmental stimuli, such as light quality and JA-dependent defenses. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense. |
| TAIR Short Description: |
phytochrome and flowering time regulatory protein (PFT1) |
| TAIR Aliases: |
MED25, PFT1 |
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