External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49290:CDS:3 | 253 | Chr5: 19980279-19980531 | Arabidopsis thaliana |
AT5G49290:CDS:4 | 156 | Chr5: 19980818-19980973 | Arabidopsis thaliana |
AT5G49290:CDS:5 | 75 | Chr5: 19981117-19981191 | Arabidopsis thaliana |
AT5G49290:CDS:6 | 75 | Chr5: 19981377-19981451 | Arabidopsis thaliana |
AT5G49290:CDS:7 | 75 | Chr5: 19981564-19981638 | Arabidopsis thaliana |
AT5G49290:CDS:9 | 2084 | Chr5: 19981786-19983869 | Arabidopsis thaliana |
AT5G49290:CDS:2 | 337 | Chr5: 19980195-19980531 | Arabidopsis thaliana |
AT5G49290:CDS:4.1 | 156 | Chr5: 19980818-19980973 | Arabidopsis thaliana |
AT5G49290:CDS:5.1 | 75 | Chr5: 19981117-19981191 | Arabidopsis thaliana |
AT5G49290:CDS:6.1 | 75 | Chr5: 19981377-19981451 | Arabidopsis thaliana |
AT5G49290:CDS:7.1 | 75 | Chr5: 19981564-19981638 | Arabidopsis thaliana |
AT5G49290:CDS:9.1 | 2084 | Chr5: 19981786-19983869 | Arabidopsis thaliana |
AT5G49290:CDS:1 | 379 | Chr5: 19980153-19980531 | Arabidopsis thaliana |
AT5G49290:CDS:4.2 | 156 | Chr5: 19980818-19980973 | Arabidopsis thaliana |
AT5G49290:CDS:5.2 | 75 | Chr5: 19981117-19981191 | Arabidopsis thaliana |
AT5G49290:CDS:6.2 | 75 | Chr5: 19981377-19981451 | Arabidopsis thaliana |
AT5G49290:CDS:7.2 | 75 | Chr5: 19981564-19981638 | Arabidopsis thaliana |
AT5G49290:CDS:9.2 | 2084 | Chr5: 19981786-19983869 | Arabidopsis thaliana |
AT5G49290:CDS:1.1 | 379 | Chr5: 19980153-19980531 | Arabidopsis thaliana |
AT5G49290:CDS:4.3 | 156 | Chr5: 19980818-19980973 | Arabidopsis thaliana |
AT5G49290:CDS:5.3 | 75 | Chr5: 19981117-19981191 | Arabidopsis thaliana |
AT5G49290:CDS:6.3 | 75 | Chr5: 19981377-19981451 | Arabidopsis thaliana |
AT5G49290:CDS:7.3 | 75 | Chr5: 19981564-19981638 | Arabidopsis thaliana |
AT5G49290:CDS:8 | 1411 | Chr5: 19981786-19983196 | Arabidopsis thaliana |
AT5G49290:CDS:11 | 58 | Chr5: 19983279-19983336 | Arabidopsis thaliana |
AT5G49290:CDS:2.1 | 337 | Chr5: 19980195-19980531 | Arabidopsis thaliana |
AT5G49290:CDS:4.4 | 156 | Chr5: 19980818-19980973 | Arabidopsis thaliana |
AT5G49290:CDS:5.4 | 75 | Chr5: 19981117-19981191 | Arabidopsis thaliana |
AT5G49290:CDS:6.4 | 75 | Chr5: 19981377-19981451 | Arabidopsis thaliana |
AT5G49290:CDS:7.4 | 75 | Chr5: 19981564-19981638 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07355:exon:1 | 351 | Chr5: 19979318-19979668 | Arabidopsis thaliana |
AT5G49290:exon:8 | 305 | Chr5: 19980227-19980531 | Arabidopsis thaliana |
AT5G49290:exon:1 | 235 | Chr5: 19979559-19979793 | Arabidopsis thaliana |
AT5G49290:exon:6 | 367 | Chr5: 19980165-19980531 | Arabidopsis thaliana |
AT5G49290:exon:19 | 2346 | Chr5: 19981786-19984131 | Arabidopsis thaliana |
AT5G49290:exon:2 | 973 | Chr5: 19979559-19980531 | Arabidopsis thaliana |
AT5G49290:exon:15 | 1411 | Chr5: 19981786-19983196 | Arabidopsis thaliana |
AT5G49290:exon:20 | 853 | Chr5: 19983279-19984131 | Arabidopsis thaliana |
AT5G49290:exon:3 | 225 | Chr5: 19979569-19979793 | Arabidopsis thaliana |
AT5G49290:exon:5 | 372 | Chr5: 19980160-19980531 | Arabidopsis thaliana |
AT5G49290:exon:18 | 2283 | Chr5: 19981786-19984068 | Arabidopsis thaliana |
AT5G49290:exon:4 | 77 | Chr5: 19979717-19979793 | Arabidopsis thaliana |
AT5G49290:exon:9 | 302 | Chr5: 19980230-19980531 | Arabidopsis thaliana |
AT5G49290:exon:13 | 75 | Chr5: 19981564-19981638 | Arabidopsis thaliana |
AT5G49290:exon:7 | 337 | Chr5: 19980195-19980531 | Arabidopsis thaliana |
AT5G49290:exon:10 | 156 | Chr5: 19980818-19980973 | Arabidopsis thaliana |
AT5G49290:exon:11 | 75 | Chr5: 19981117-19981191 | Arabidopsis thaliana |
AT5G49290:exon:12 | 75 | Chr5: 19981377-19981451 | Arabidopsis thaliana |
AT5G49290:exon:17 | 2272 | Chr5: 19981786-19984057 | Arabidopsis thaliana |
AT5G49290:exon:14 | 71 | Chr5: 19981568-19981638 | Arabidopsis thaliana |
AT5G49290:exon:16 | 2084 | Chr5: 19981786-19983869 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49290:five_prime_UTR:7 | 52 | Chr5: 19980227-19980278 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:1 | 235 | Chr5: 19979559-19979793 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:6 | 30 | Chr5: 19980165-19980194 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:2 | 594 | Chr5: 19979559-19980152 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:3 | 225 | Chr5: 19979569-19979793 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:5 | 35 | Chr5: 19980160-19980194 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:4 | 77 | Chr5: 19979717-19979793 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:8 | 49 | Chr5: 19980230-19980278 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:9 | 71 | Chr5: 19981568-19981638 | Arabidopsis thaliana |
AT5G49290:five_prime_UTR:10 | 11 | Chr5: 19981786-19981796 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G07355 | AT5G07355 | 351 | Chr5: 19979318-19979668 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G49290.5 | 3267 | Chr5: 19979559-19984131 |
AT5G49290.4 | 3329 | Chr5: 19979559-19984131 |
AT5G49290.2 | 3700 | Chr5: 19979559-19984131 |
AT5G49290.3 | 3618 | Chr5: 19979559-19984131 |
AT5G49290.6 | 3261 | Chr5: 19979569-19984068 |
AT5G49290.7 | 2769 | Chr5: 19979717-19983869 |
AT5G49290.8 | 2802 | Chr5: 19980195-19983869 |
AT5G49290.1 | 2915 | Chr5: 19980195-19984057 |
AT5G49290.9 | 2155 | Chr5: 19981568-19983869 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G49290:three_prime_UTR:4 | 262 | Chr5: 19983870-19984131 | Arabidopsis thaliana |
AT5G49290:three_prime_UTR:1 | 795 | Chr5: 19983337-19984131 | Arabidopsis thaliana |
AT5G49290:three_prime_UTR:3 | 199 | Chr5: 19983870-19984068 | Arabidopsis thaliana |
AT5G49290:three_prime_UTR:2 | 188 | Chr5: 19983870-19984057 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8BAW9_ARATH RLP56_ARATH-2 A0A1P8BAW2_ARATH A0A1P8BAW0_ARATH RLP56_ARATH A0A1P8BAV7_ARATH A0A1P8BAV8_ARATH | similarity | Belongs to the RLP family. |
Function
Gene Ontology
cellular component | |
---|---|
plasma membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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